Click here to switch to the map view.

The map label for this gene is 78065698

Identifier: 78065698

GI number: 78065698

Start: 1163050

End: 1163451

Strand: Direct

Name: 78065698

Synonym: Bcep18194_A4226

Alternate gene names: NA

Gene position: 1163050-1163451 (Clockwise)

Preceding gene: 78065697

Following gene: 78065699

Centisome position: 31.48

GC content: 70.9

Gene sequence:

>402_bases
ATGAGCGCGGCGCCGGACGCCGTGCGTGTGTGCCCGTCGGATGCGCTGGCCGATGGCGGCGCCGGCGTGCGCGTCGACGC
GACGTTGCGCGGCGAGCAGGCCGTCGTGTTCTTCGTGCGCTACGAGGGCCAGGCATACGGTTACCTGAATCGCTGCGCGC
ATGTGCCGATGGAGCTCGACTGGGCCGAAGGGCAGTTCTTCGAATCGTCGGGCCTCTACCTGATGTGCGCGACGCATGGC
GCGATCTACGAGCCGAACACCGGCAAGTGCGTCGGCGGCCCGTGCCGTGGCGGCCGCCTGCGGCCGGTCGAGGTCGACGA
GCGCGACACGTCCGACGGGCGTGCGGTATTCTGGGTGCCCGACGCCGACCTGCGTCCCGCCGTTCCCGCCACGACCGACT
AA

Upstream 100 bases:

>100_bases
TCGCGTACGGCGCGCACACGGCCGATGCACTGGCTGCGCTCGCGCCGCGCTTCGTCGCGCCGGACGTCGGCGCGCTGGCC
GCGTGGCTGCGGGAGCACGC

Downstream 100 bases:

>100_bases
CGACAACACTGCATGGCCGACCAACCGAATTCCCCGGATTCCTCCTCCCGTCCCGACAGCCGTGAACCGAGCTGGGAGCG
TGCGGCGCTCGAGCGGATCG

Product: Rieske (2Fe-2S) protein

Products: NA

Alternate protein names: Rieske Domain-Containing Protein; Rieske Region; Ferredoxin; Rieske; Rieske Protein; Rieske Iron-Sulfur Domain Protein; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulphur Domain Protein; Rieske 2Fe-2S Family Protein; Ferredoxin Protein; Rieske Iron-Sulfur Domain-Containing Protein

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSAAPDAVRVCPSDALADGGAGVRVDATLRGEQAVVFFVRYEGQAYGYLNRCAHVPMELDWAEGQFFESSGLYLMCATHG
AIYEPNTGKCVGGPCRGGRLRPVEVDERDTSDGRAVFWVPDADLRPAVPATTD

Sequences:

>Translated_133_residues
MSAAPDAVRVCPSDALADGGAGVRVDATLRGEQAVVFFVRYEGQAYGYLNRCAHVPMELDWAEGQFFESSGLYLMCATHG
AIYEPNTGKCVGGPCRGGRLRPVEVDERDTSDGRAVFWVPDADLRPAVPATTD
>Mature_132_residues
SAAPDAVRVCPSDALADGGAGVRVDATLRGEQAVVFFVRYEGQAYGYLNRCAHVPMELDWAEGQFFESSGLYLMCATHGA
IYEPNTGKCVGGPCRGGRLRPVEVDERDTSDGRAVFWVPDADLRPAVPATTD

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14270; Mature: 14139

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPDAVRVCPSDALADGGAGVRVDATLRGEQAVVFFVRYEGQAYGYLNRCAHVPMELD
CCCCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEECHHHCCCCEEEE
WAEGQFFESSGLYLMCATHGAIYEPNTGKCVGGPCRGGRLRPVEVDERDTSDGRAVFWVP
CCCCEEEECCCCEEEEECCCEEECCCCCCEECCCCCCCEECEEECCCCCCCCCCEEEEEC
DADLRPAVPATTD
CCCCCCCCCCCCC
>Mature Secondary Structure 
SAAPDAVRVCPSDALADGGAGVRVDATLRGEQAVVFFVRYEGQAYGYLNRCAHVPMELD
CCCCCCEEECCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEECHHHCCCCEEEE
WAEGQFFESSGLYLMCATHGAIYEPNTGKCVGGPCRGGRLRPVEVDERDTSDGRAVFWVP
CCCCEEEECCCCEEEEECCCEEECCCCCCEECCCCCCCEECEEECCCCCCCCCCEEEEEC
DADLRPAVPATTD
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA