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The map label for this gene is 78065404

Identifier: 78065404

GI number: 78065404

Start: 846869

End: 848311

Strand: Reverse

Name: 78065404

Synonym: Bcep18194_A3930

Alternate gene names: NA

Gene position: 848311-846869 (Counterclockwise)

Preceding gene: 78065408

Following gene: 78065403

Centisome position: 22.96

GC content: 70.2

Gene sequence:

>1443_bases
ATGAAGCCAGCCCGCCCTCGCCCGCCTCGCCGCATCCTCGCCCGCTTCGTCGCGGTGTCGTGGCGCGACCTCGCGCTGTC
GATCGGCCCGACCGTGCTGCTCGCCATCGCGGCCGTCTGGCTCGCGGTCAAGCTGATCCAGCCGGCACCGCCGTCCACGC
TCGTGATCTCGTCCGGGCCGCCCGGCAGCACCTACTGGAACGCCGCGCAGAAATACAAGACGATCCTGGCGAAGAACGGC
GTCACGCTCGACGTCCAGTCGTCCGAAGGGTCCGCCCAGAACCTCGCGCGGCTGTCGAACCCGAACGCGCCGGTCGACGT
CGGCTTCGTGCAGAGCGGCATCGGCCCGAAGGAGCGCGACGAACACCTCGTGTCGCTCGGCAGCATCGGCTACGTGCCGC
TCGCGATCATGTATCGCGGCCCGGTCGTCGCGCGCCTGTCCGACTTCAAGGGCAAGCGGCTCGCGCTCGGCGCGGAAGGC
AGCGGCGCACGCGAGCTGAGCCTCGCCCTGCTGAAGATGAACGGCATCGTGCCGGGCGGCACGACCGAACTGCTACCGAC
CGCCGGCGAGGACGCGGCCACCGCGCTGCTCGACGGCAAGATCGACGCGGCCTTCCTGTCAGGCGACTCGACGCAGATCC
CGGTGATGGCGAAGCTGTTCCGCGCGCCGGGCGTGCACGTGTATTCGTTCACGCAGGCGGAAGCGTACGCGCGGCGCTTT
CCGTACCTGACCGCGATCACGCTGCCGATGGGCGTCTACGATCTCGGTCAGAATCTCCCGCCCGCCGACATCCACACGGT
TGCGCCGACCATCGAACTCGTCGCGCGCGATTCGCTGCACCCTGCACTGTCCGACCTGCTGATCGAGGCCGCGCGCGAGG
TGCACGGCCACGCGACGATCCTGCAGCACGCGGGCGAATTCCCGTCGCCCGTCACGCGCGGCTTCCAGCTCTCCGACGAC
GCCGCGCGCTACTACAAATCAGGGAAGACCTTCCTGTACCGGCGGCTGCCGTTCTGGGTCGCGAGCCTCGTCGACCGGCT
GCTCGTCGTGGTCGTGCCGCTGATCGTCGTGCTGATCCCCGGGCTGCGGCTCGTGCCGTCGCTGTACGGCTGGCGCGTGC
GCTCGCGCATCTATCGCTGGTACGGTGCGCTGATCGCGCTCGAGCGCAGCGCGCTCGGCGAACACACGGCCGAGGAGCGC
GTGCAGTTGCTCGACGAGCTCGACGACATCGAGGAAGCCGTGAACCGGATGAAGATGCCGCTGGCTTATGCCGGGCAGTT
CTACGTGCTGCGCGAGCACATCGGCTTCGTGCGCGAACGGCTCACCGCGCACGACCAGGACACGCCGGCCAGCCCGCCGG
GCGCCGGTGGCCCGCCGCAGGCAAGTGCCGAAGCCGCGCCGCCGGCCGGCGATCCCCCTCGGGCGACTCCCGGTTCCGCG
TGA

Upstream 100 bases:

>100_bases
CCATGGCGAAACCGGGTACCATCGCCGCGAGCATCGGCATCGTCCATGACAGCCGTCCGACCGTCACCGATCCGTCACGC
CAGCGTCATCCGTCACCCCC

Downstream 100 bases:

>100_bases
GCGGACGATCCGCGATCATTGCCGCATGCGCGTGCCGCCGCGTAACATGGAGGCCGCCGCCAGGCGCCGCACGCCCCACC
CACTGGAGATCGACATGACA

Product: TRAP-type uncharacterized transport system periplasmic component-like

Products: NA

Alternate protein names: TRAP-Type Transport System Periplasmic Component Protein; TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Protein; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; Trap Transporter Solute Receptor Taxi Family

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MKPARPRPPRRILARFVAVSWRDLALSIGPTVLLAIAAVWLAVKLIQPAPPSTLVISSGPPGSTYWNAAQKYKTILAKNG
VTLDVQSSEGSAQNLARLSNPNAPVDVGFVQSGIGPKERDEHLVSLGSIGYVPLAIMYRGPVVARLSDFKGKRLALGAEG
SGARELSLALLKMNGIVPGGTTELLPTAGEDAATALLDGKIDAAFLSGDSTQIPVMAKLFRAPGVHVYSFTQAEAYARRF
PYLTAITLPMGVYDLGQNLPPADIHTVAPTIELVARDSLHPALSDLLIEAAREVHGHATILQHAGEFPSPVTRGFQLSDD
AARYYKSGKTFLYRRLPFWVASLVDRLLVVVVPLIVVLIPGLRLVPSLYGWRVRSRIYRWYGALIALERSALGEHTAEER
VQLLDELDDIEEAVNRMKMPLAYAGQFYVLREHIGFVRERLTAHDQDTPASPPGAGGPPQASAEAAPPAGDPPRATPGSA

Sequences:

>Translated_480_residues
MKPARPRPPRRILARFVAVSWRDLALSIGPTVLLAIAAVWLAVKLIQPAPPSTLVISSGPPGSTYWNAAQKYKTILAKNG
VTLDVQSSEGSAQNLARLSNPNAPVDVGFVQSGIGPKERDEHLVSLGSIGYVPLAIMYRGPVVARLSDFKGKRLALGAEG
SGARELSLALLKMNGIVPGGTTELLPTAGEDAATALLDGKIDAAFLSGDSTQIPVMAKLFRAPGVHVYSFTQAEAYARRF
PYLTAITLPMGVYDLGQNLPPADIHTVAPTIELVARDSLHPALSDLLIEAAREVHGHATILQHAGEFPSPVTRGFQLSDD
AARYYKSGKTFLYRRLPFWVASLVDRLLVVVVPLIVVLIPGLRLVPSLYGWRVRSRIYRWYGALIALERSALGEHTAEER
VQLLDELDDIEEAVNRMKMPLAYAGQFYVLREHIGFVRERLTAHDQDTPASPPGAGGPPQASAEAAPPAGDPPRATPGSA
>Mature_480_residues
MKPARPRPPRRILARFVAVSWRDLALSIGPTVLLAIAAVWLAVKLIQPAPPSTLVISSGPPGSTYWNAAQKYKTILAKNG
VTLDVQSSEGSAQNLARLSNPNAPVDVGFVQSGIGPKERDEHLVSLGSIGYVPLAIMYRGPVVARLSDFKGKRLALGAEG
SGARELSLALLKMNGIVPGGTTELLPTAGEDAATALLDGKIDAAFLSGDSTQIPVMAKLFRAPGVHVYSFTQAEAYARRF
PYLTAITLPMGVYDLGQNLPPADIHTVAPTIELVARDSLHPALSDLLIEAAREVHGHATILQHAGEFPSPVTRGFQLSDD
AARYYKSGKTFLYRRLPFWVASLVDRLLVVVVPLIVVLIPGLRLVPSLYGWRVRSRIYRWYGALIALERSALGEHTAEER
VQLLDELDDIEEAVNRMKMPLAYAGQFYVLREHIGFVRERLTAHDQDTPASPPGAGGPPQASAEAAPPAGDPPRATPGSA

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51630; Mature: 51630

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPARPRPPRRILARFVAVSWRDLALSIGPTVLLAIAAVWLAVKLIQPAPPSTLVISSGP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
PGSTYWNAAQKYKTILAKNGVTLDVQSSEGSAQNLARLSNPNAPVDVGFVQSGIGPKERD
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCEEEHHHHCCCCCCHHH
EHLVSLGSIGYVPLAIMYRGPVVARLSDFKGKRLALGAEGSGARELSLALLKMNGIVPGG
HHHHHHCCCCHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHEEHHHCCCCCCC
TTELLPTAGEDAATALLDGKIDAAFLSGDSTQIPVMAKLFRAPGVHVYSFTQAEAYARRF
CCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHC
PYLTAITLPMGVYDLGQNLPPADIHTVAPTIELVARDSLHPALSDLLIEAAREVHGHATI
CCCEEEHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LQHAGEFPSPVTRGFQLSDDAARYYKSGKTFLYRRLPFWVASLVDRLLVVVVPLIVVLIP
HHHCCCCCCHHHCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLRLVPSLYGWRVRSRIYRWYGALIALERSALGEHTAEERVQLLDELDDIEEAVNRMKMP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LAYAGQFYVLREHIGFVRERLTAHDQDTPASPPGAGGPPQASAEAAPPAGDPPRATPGSA
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPARPRPPRRILARFVAVSWRDLALSIGPTVLLAIAAVWLAVKLIQPAPPSTLVISSGP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
PGSTYWNAAQKYKTILAKNGVTLDVQSSEGSAQNLARLSNPNAPVDVGFVQSGIGPKERD
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCEEEHHHHCCCCCCHHH
EHLVSLGSIGYVPLAIMYRGPVVARLSDFKGKRLALGAEGSGARELSLALLKMNGIVPGG
HHHHHHCCCCHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHEEHHHCCCCCCC
TTELLPTAGEDAATALLDGKIDAAFLSGDSTQIPVMAKLFRAPGVHVYSFTQAEAYARRF
CCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHC
PYLTAITLPMGVYDLGQNLPPADIHTVAPTIELVARDSLHPALSDLLIEAAREVHGHATI
CCCEEEHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LQHAGEFPSPVTRGFQLSDDAARYYKSGKTFLYRRLPFWVASLVDRLLVVVVPLIVVLIP
HHHCCCCCCHHHCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLRLVPSLYGWRVRSRIYRWYGALIALERSALGEHTAEERVQLLDELDDIEEAVNRMKMP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LAYAGQFYVLREHIGFVRERLTAHDQDTPASPPGAGGPPQASAEAAPPAGDPPRATPGSA
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA