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The map label for this gene is ydhP [H]

Identifier: 78065390

GI number: 78065390

Start: 829944

End: 831113

Strand: Reverse

Name: ydhP [H]

Synonym: Bcep18194_A3916

Alternate gene names: 78065390

Gene position: 831113-829944 (Counterclockwise)

Preceding gene: 78065391

Following gene: 78065389

Centisome position: 22.5

GC content: 68.72

Gene sequence:

>1170_bases
ATGCCCTTACCTCTTTTCGCCCTCGCCGTCGCCGCATTTGGAATCGGTACCACCGAGTTCGTGATCATGGGGCTGCTGCC
CAATGTCGCGCGCGACCTCGGCGTGTCGATCCCGGCCGCCGGCATGCTCGTGTCGGGCTATGCGCTCGGCGTGACGATCG
GTGCACCGATCCTCGCGATCGTCACCGCGAAGATGCCGCGCAAGCGCGCGCTGATGGGCCTGATCGGGCTGTTCATCGCG
GGCAACCTGTTCTGCGCGATCGCACCGGGCTACGCGGTGCTGATGGCCGCGCGCGTCGTCACCGCGTTCTGCCACGGCGC
GTTCTTCGGGATCGGCTCGGTGGTCGCGAGCAACCTGGTCGCGCCGAACCGTCGCGCGCAGGCGATCGCGCTGATGTTCA
CCGGCCTCACCCTCGCGAACGTGCTCGGCGTGCCGCTCGGCACCGCGCTCGGCCAGGCATACGGCTGGCGCGCGACGTTC
TGGGCCGTCACCGGCATCGGCATCGCCGCGGCCGCCGCGCTCGCCGTCTGCCTGCCGAAGAACCTGGCCATGCCCGACAC
CAGCATCACGCGCGAATTCAGCGTGCTGAAACATCCGCAGGTGCTGATGGTGCTCGGCATCAGCGTGCTCGCATCAGCCA
GCCTGTTCAGCGTGTTCACGTACATCACCCCGATTCTCGAAGACGTGACGGGCTTCTCGCCGCGCCAGGTCACCTACGTG
CTGCTGCTGTTCGGCCTCGGGCTGACGGTGGGCGGCACGCTCGGCGGCAAGCTCGCCGACTGGCGCCGGATGCCGTCGCT
GATCGCGACGCTCGCGCTGATCGGCGTGATCCTCGCGCTGTTCGCGGGCACGATGCACCTGCCGTTCGCCGCGCTCGCGA
CGATCTTCGTGTGGGGCATCCTCGCGTTCGCGATCGTGCCGCCGCTGCAGATCCTGATCGTCGACCGTGCCAGCGACGCG
CCGAACCTCGCGTCGACGCTGAACCAGGGCGCGTTCAACCTCGGCAACGCGACCGGTGCGTGGCTCGGCGGGATGGCGAT
CGGCTCGGGCGTGTCGCTCGTCAACCTGCCTTGGGTCGGCATTGCGATGGCTGTCGCGGCGCTCGCGCTCACGTTGTGGT
CGGCGTCGCTCGAACGCCGACCGGTATCCGTGCCGACCGAGTACGTGTAA

Upstream 100 bases:

>100_bases
TTTCACTGAAGTAGAATCGCGGCTGTCGTTCGCCTTACCGTCCGCCCGTCCCGCGCATCCTGCGCCAGCCCGAGCGGCGG
CTTTTCCCGAGCCTACCGCG

Downstream 100 bases:

>100_bases
AGCAACCCTGTCGAAATCGTTGCGTACACAACTCCACTCGAAGCTGATGGCCTTCATGGACCTTTCAAGGTCCGCGGTGT
AGCATCCCCGCCGATGAAAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAIVTAKMPRKRALMGLIGLFIA
GNLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAYGWRATF
WAVTGIGIAAAAALAVCLPKNLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYV
LLLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGVILALFAGTMHLPFAALATIFVWGILAFAIVPPLQILIVDRASDA
PNLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVNLPWVGIAMAVAALALTLWSASLERRPVSVPTEYV

Sequences:

>Translated_389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAIVTAKMPRKRALMGLIGLFIA
GNLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAYGWRATF
WAVTGIGIAAAAALAVCLPKNLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYV
LLLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGVILALFAGTMHLPFAALATIFVWGILAFAIVPPLQILIVDRASDA
PNLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVNLPWVGIAMAVAALALTLWSASLERRPVSVPTEYV
>Mature_388_residues
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAIVTAKMPRKRALMGLIGLFIAG
NLFCAIAPGYAVLMAARVVTAFCHGAFFGIGSVVASNLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAYGWRATFW
AVTGIGIAAAAALAVCLPKNLAMPDTSITREFSVLKHPQVLMVLGISVLASASLFSVFTYITPILEDVTGFSPRQVTYVL
LLFGLGLTVGGTLGGKLADWRRMPSLIATLALIGVILALFAGTMHLPFAALATIFVWGILAFAIVPPLQILIVDRASDAP
NLASTLNQGAFNLGNATGAWLGGMAIGSGVSLVNLPWVGIAMAVAALALTLWSASLERRPVSVPTEYV

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=381, Percent_Identity=46.1942257217848, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI1786595, Length=363, Percent_Identity=36.3636363636364, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1787808, Length=398, Percent_Identity=30.1507537688442, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI145693198, Length=337, Percent_Identity=27.299703264095, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40097; Mature: 39965

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAI
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]