Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 78065307

GI number: 78065307

Start: 737711

End: 739360

Strand: Reverse

Name: recN [H]

Synonym: Bcep18194_A3831

Alternate gene names: 78065307

Gene position: 739360-737711 (Counterclockwise)

Preceding gene: 78065308

Following gene: 78065305

Centisome position: 20.01

GC content: 70.24

Gene sequence:

>1650_bases
ATGCTCCGCCACCTCTCGATCCGCGACTTCGTCATCGTCGCCGCGCTCGATCTCGAATTCGACAGCGGCTTTTCCGTCTT
TTCCGGCGAAACCGGCGCCGGGAAATCGATCCTGATCGACGCCCTTGCCCTCGCGCTCGGCGAACGCGCCGACGCAAGCG
TCGTGCGCATCGGCTGCGGCCGCGCCGACATCACCGCCGAATTCACGCAGCACGACCGCGTCGCGCGCTGGCTCGACGAA
CACGCGTTCGACACCGAGGACACCGTGATGCTGCGCCGCGTGATCGATGCGAACGGCCGGTCGCGCGCGTTCATCAACGG
CACCAGCGCGACGCTCGCGCAGCTGCGCGAGCTCGGCGAAATGCTCGTCGACATCCACGGCCAGCATGCGCACCAGTTGC
TGATGCGGCCCGACGCGCAGCGCGAGCTGTTCGACACGCACGCCGGGCTCGTCGCCGATGCCGCGAACGTCGCGCGCGCG
TGGCGCGTGTGGCGCGATGCGACGCAGGCGATCGAGGCGGCAAAAGCGCACGAGCGCGAGCTGCAGCTCGAACGCGAAAA
GCTCGCCTGGCAGCTCGCCGAGCTCGACAAGCTCGCGCCGCAGCCCGGCGAATGGGACGAAGTCAGCAACGAGCACAAGC
GCCTGTCGCATTCGGCGAACCTGATCGAAGGCGTGCGCGGCGCACTCAACGCGTTGTCCGAGTCCGACGACGCGATGCTT
GCGCAGCTTGGCGCGATCGTGTCGAAGCTGCGCAGCCTCGCCGATTACGACACCACGCTCGGCGACGCGCTCGCGTCGCT
CGAACCGGCCGAGATCCAGCTGCAGGAAGCCGTCTATTCGCTGTCCCACTATGCGCAGCGCGTCGATCTCGATCCCGAGC
GGCTCGCGCAGGTCGAGACGCGCCTCGATGCGCTGCACTCGACCGCCCGCAAGTTCCGCTTGCCGCCCGACACGCTGCAC
GAAGAACACGCGGCCCGCCGCGCCCAGCTCGCCGCACTCGATGCGGCCGCCGATCTCGGCGCGCTCGAAGCGGTGCAGGC
CAAGGCGCGGGAAGCCTATCTCGCCGACGCCAAACACCTGTCCAAGGCGCGCACCCAGGCCGCCAGGACGCTCGGCACGG
CCGTCACGGCCGGCATGCAGGAACTGTCGATGGCGGGCGGGAGCTTCGAGGTCGCGCTCGTGCCGCTCGCCGACGGCGGC
CCGCACGGGCTCGAGCAGGTCGAATTCCGGGTCGCCGGGCACCCCGGCGTGCCGCTGCGGCCGCTCGCGAAGGTTGCGTC
GGGCGGCGAGCTCGCGCGGATCAGCCTCGCGCTCGCGGTGATCGCCAGCGCGGCCAGCCCGACACCAACGTTGATCTTCG
ACGAAGTCGATACGGGGATCGGCGGCGGCGTCGCCGAAGTGGTCGGCCGCCTGCTGCACCAGCTCGGGCGCGATCGCCAG
GTGCTGTGCGTGACGCACCTGCCGCAGGTCGCCGCGCGCGGCGACCACCACTTCCAGGTCACAAAAGGCGCCGACGACCG
CGGCGGCACGGTGTCGACGGTCATCGCGCTCGACCGCGCCAACCGGATCGAGGAAGTCGCGCGAATGCTCGGCGGGCTCG
AGATCACGGCCACGACGCGCAAGCACGCGAAGGAAATGCTGGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCTACAGCTACTACGCGACGCTGCGCAAGAAGCTGCACTGGAACGAACACGCCTCGAACGAAGACGACAAGGCGTCCTG
ACGCCGCTCCGCCCGACACC

Downstream 100 bases:

>100_bases
CGCCGGCCATCCGTTATCCGTTATCCGTTCGTCGAATGCAAAAGACCGGCGCACGCGCCGGTCTTTTGTTGGGGGGCACG
GCGGCACAATCGCGTCCGCC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLRHLSIRDFVIVAALDLEFDSGFSVFSGETGAGKSILIDALALALGERADASVVRIGCGRADITAEFTQHDRVARWLDE
HAFDTEDTVMLRRVIDANGRSRAFINGTSATLAQLRELGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLVADAANVARA
WRVWRDATQAIEAAKAHERELQLEREKLAWQLAELDKLAPQPGEWDEVSNEHKRLSHSANLIEGVRGALNALSESDDAML
AQLGAIVSKLRSLADYDTTLGDALASLEPAEIQLQEAVYSLSHYAQRVDLDPERLAQVETRLDALHSTARKFRLPPDTLH
EEHAARRAQLAALDAAADLGALEAVQAKAREAYLADAKHLSKARTQAARTLGTAVTAGMQELSMAGGSFEVALVPLADGG
PHGLEQVEFRVAGHPGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGRDRQ
VLCVTHLPQVAARGDHHFQVTKGADDRGGTVSTVIALDRANRIEEVARMLGGLEITATTRKHAKEMLAA

Sequences:

>Translated_549_residues
MLRHLSIRDFVIVAALDLEFDSGFSVFSGETGAGKSILIDALALALGERADASVVRIGCGRADITAEFTQHDRVARWLDE
HAFDTEDTVMLRRVIDANGRSRAFINGTSATLAQLRELGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLVADAANVARA
WRVWRDATQAIEAAKAHERELQLEREKLAWQLAELDKLAPQPGEWDEVSNEHKRLSHSANLIEGVRGALNALSESDDAML
AQLGAIVSKLRSLADYDTTLGDALASLEPAEIQLQEAVYSLSHYAQRVDLDPERLAQVETRLDALHSTARKFRLPPDTLH
EEHAARRAQLAALDAAADLGALEAVQAKAREAYLADAKHLSKARTQAARTLGTAVTAGMQELSMAGGSFEVALVPLADGG
PHGLEQVEFRVAGHPGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGRDRQ
VLCVTHLPQVAARGDHHFQVTKGADDRGGTVSTVIALDRANRIEEVARMLGGLEITATTRKHAKEMLAA
>Mature_549_residues
MLRHLSIRDFVIVAALDLEFDSGFSVFSGETGAGKSILIDALALALGERADASVVRIGCGRADITAEFTQHDRVARWLDE
HAFDTEDTVMLRRVIDANGRSRAFINGTSATLAQLRELGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLVADAANVARA
WRVWRDATQAIEAAKAHERELQLEREKLAWQLAELDKLAPQPGEWDEVSNEHKRLSHSANLIEGVRGALNALSESDDAML
AQLGAIVSKLRSLADYDTTLGDALASLEPAEIQLQEAVYSLSHYAQRVDLDPERLAQVETRLDALHSTARKFRLPPDTLH
EEHAARRAQLAALDAAADLGALEAVQAKAREAYLADAKHLSKARTQAARTLGTAVTAGMQELSMAGGSFEVALVPLADGG
PHGLEQVEFRVAGHPGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGRDRQ
VLCVTHLPQVAARGDHHFQVTKGADDRGGTVSTVIALDRANRIEEVARMLGGLEITATTRKHAKEMLAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=559, Percent_Identity=43.2915921288014, Blast_Score=418, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59084; Mature: 59084

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLSIRDFVIVAALDLEFDSGFSVFSGETGAGKSILIDALALALGERADASVVRIGCG
CCCCCCHHHEEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC
RADITAEFTQHDRVARWLDEHAFDTEDTVMLRRVIDANGRSRAFINGTSATLAQLRELGE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
MLVDIHGQHAHQLLMRPDAQRELFDTHAGLVADAANVARAWRVWRDATQAIEAAKAHERE
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLEREKLAWQLAELDKLAPQPGEWDEVSNEHKRLSHSANLIEGVRGALNALSESDDAML
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AQLGAIVSKLRSLADYDTTLGDALASLEPAEIQLQEAVYSLSHYAQRVDLDPERLAQVET
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RLDALHSTARKFRLPPDTLHEEHAARRAQLAALDAAADLGALEAVQAKAREAYLADAKHL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKARTQAARTLGTAVTAGMQELSMAGGSFEVALVPLADGGPHGLEQVEFRVAGHPGVPLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEEECCCCCCCHH
PLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGRDRQ
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCE
VLCVTHLPQVAARGDHHFQVTKGADDRGGTVSTVIALDRANRIEEVARMLGGLEITATTR
EEEEECCHHHHHCCCCCEEEECCCCCCCCCEEEHEEHHHHHHHHHHHHHHCCEEEEEHHH
KHAKEMLAA
HHHHHHHCC
>Mature Secondary Structure
MLRHLSIRDFVIVAALDLEFDSGFSVFSGETGAGKSILIDALALALGERADASVVRIGCG
CCCCCCHHHEEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC
RADITAEFTQHDRVARWLDEHAFDTEDTVMLRRVIDANGRSRAFINGTSATLAQLRELGE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
MLVDIHGQHAHQLLMRPDAQRELFDTHAGLVADAANVARAWRVWRDATQAIEAAKAHERE
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLEREKLAWQLAELDKLAPQPGEWDEVSNEHKRLSHSANLIEGVRGALNALSESDDAML
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AQLGAIVSKLRSLADYDTTLGDALASLEPAEIQLQEAVYSLSHYAQRVDLDPERLAQVET
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RLDALHSTARKFRLPPDTLHEEHAARRAQLAALDAAADLGALEAVQAKAREAYLADAKHL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKARTQAARTLGTAVTAGMQELSMAGGSFEVALVPLADGGPHGLEQVEFRVAGHPGVPLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEEECCCCCCCHH
PLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVVGRLLHQLGRDRQ
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCE
VLCVTHLPQVAARGDHHFQVTKGADDRGGTVSTVIALDRANRIEEVARMLGGLEITATTR
EEEEECCHHHHHCCCCCEEEECCCCCCCCCEEEHEEHHHHHHHHHHHHHHCCEEEEEHHH
KHAKEMLAA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]