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The map label for this gene is glcD [H]

Identifier: 78065297

GI number: 78065297

Start: 722149

End: 723558

Strand: Reverse

Name: glcD [H]

Synonym: Bcep18194_A3821

Alternate gene names: 78065297

Gene position: 723558-722149 (Counterclockwise)

Preceding gene: 78065300

Following gene: 78065296

Centisome position: 19.59

GC content: 68.51

Gene sequence:

>1410_bases
GTGAATCACCCTGCCCAGCCGGCCGCCACGCGCCGCCCCCTTCCCCCCGCCATGCTCGATGCGCTGCGCGCCGCCTTCGG
CGAGCGCGTGTCGACTGCTGAAGCCGTCCGCGCCCACCACGGCCGCGACGAATCGCCGTTCGACCCGCAACTGCCCGACG
CCGTCGTGTTCGCACACAGCGCGGACGACGTGCGCGAAGTCGTGTCGCTATGCTCGCTGTACAGCGTCCCGCTGATCCCG
TACGGCGCCGGCTCGTCGCTCGAAGGCCATCTGCTCGCGGTACGCGGCGGTGTCTCGCTCGACCTGTCGGAAATGAACCG
CGTGCTGTCGATCAACGCGGAAGACCTGACCGTGACGGTCGAGCCGGGCATCACGCGCAAGGCGCTCAACGAAGCATTGC
GCGACACCGGCCTGTTCTTCCCGATCGACCCGGGCGCCGACGCGAGCATCGGCGGGATGACCGCAACGCGCGCATCGGGC
ACCAACGCCGTGCGCTACGGCACGATGCGCGAGAACGTGCTCGGCCTGACCGCCGTGCTCGCCGACGGCCGCGTGGTGAA
AACCGGCTCGCGCGCCCGCAAGTCGTCGGCCGGCTACGACCTCACGCGCCTGTTCGTCGGCTCCGAAGGCACGCTCGGCG
TGATCACGGAAATCACGCTGCGCCTGCATCCGCTGCCCGAAGCCGTATCCGCCGCGATCTGCACGTTCCCGTCGATGGGC
GACGCGGTGCGCACCGTGATCGAGACGATCCAGATCGGCGTGCCGATCGCGCGCGTCGAATTCGTCGATGCGCTCGCGGT
GCGTTCGATCAACCGCCATTCGAACCTGACGCTGACCGAAGCGCCGACGCTGTTCTTCGAATTCCACGGCACCGAGGCCG
GCGTGAAGGAACAGGCCGAGCTCGTGCAGGCGCTCGCCGGCCAGAACAACGGCCAGGGCTTCGAATGGGCGACCCGCCCC
GAGGATCGCAGCCGGCTCTGGGCCGCCCGCCACAACGCGTATTTCGCGATGCTGCAGTTGAAACCCGGCTGCCGCGCGGT
GACGACCGACGTGTGCGTGCCGATCTCGCAGCTCGCCGCGTGCGTCGAGGAAACCGAAGTCGACCTGCGCGCGTCGTCGC
TGCCCTGCCCGATCGTCGGCCACGTCGGCGACGGCAACTTCCACGTCGCGATCCTGATCGACCCCGACAAGCCGGAAGAA
ATCGCCGAAGCCGAGCACATCAACGACCGGATCGTCGAGCGCGCGCTGCGCCTCGGCGGCACCTGCACGGGCGAGCACGG
CGTCGGGCTGCACAAGATGCGCTTCCTGCCGAAGGAGCACGGCGACAACGCGATCGATACGATGCGTGCGATCAAGCTCG
CGCTCGATCCGCGCAACCTGATGAATCCGGGCAAGATTTTCACGTGCTGA

Upstream 100 bases:

>100_bases
CGGGCGCAGCGGGCGTTACAGCGTAGAATGGGCCGAAACCCTGCAGCACGGGAGCCGGGCCGGCGCCAACGCGCTCACCG
GGATCGACAAGGAGACGTAC

Downstream 100 bases:

>100_bases
CACGGCGGCGCGACGTCGCGCCGCCTGCTGCAGGAGACCCAATGAACGCTCCCGTCGAACTGTCGAGCGCGGCACGCGCG
CAGCGCCAGCGTGAAGTCGT

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MNHPAQPAATRRPLPPAMLDALRAAFGERVSTAEAVRAHHGRDESPFDPQLPDAVVFAHSADDVREVVSLCSLYSVPLIP
YGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASG
TNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPSMG
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNNGQGFEWATRP
EDRSRLWAARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEE
IAEAEHINDRIVERALRLGGTCTGEHGVGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC

Sequences:

>Translated_469_residues
MNHPAQPAATRRPLPPAMLDALRAAFGERVSTAEAVRAHHGRDESPFDPQLPDAVVFAHSADDVREVVSLCSLYSVPLIP
YGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASG
TNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPSMG
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNNGQGFEWATRP
EDRSRLWAARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEE
IAEAEHINDRIVERALRLGGTCTGEHGVGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
>Mature_469_residues
MNHPAQPAATRRPLPPAMLDALRAAFGERVSTAEAVRAHHGRDESPFDPQLPDAVVFAHSADDVREVVSLCSLYSVPLIP
YGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTVEPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASG
TNAVRYGTMRENVLGLTAVLADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPSMG
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAELVQALAGQNNGQGFEWATRP
EDRSRLWAARHNAYFAMLQLKPGCRAVTTDVCVPISQLAACVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEE
IAEAEHINDRIVERALRLGGTCTGEHGVGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI37595756, Length=454, Percent_Identity=53.0837004405286, Blast_Score=494, Evalue=1e-140,
Organism=Homo sapiens, GI37595754, Length=477, Percent_Identity=50.5241090146751, Blast_Score=485, Evalue=1e-137,
Organism=Homo sapiens, GI119964728, Length=418, Percent_Identity=29.4258373205742, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI4501993, Length=458, Percent_Identity=25.9825327510917, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1789351, Length=423, Percent_Identity=31.9148936170213, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI1787977, Length=522, Percent_Identity=28.735632183908, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI48994907, Length=224, Percent_Identity=32.5892857142857, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI48994914, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71992373, Length=464, Percent_Identity=45.0431034482759, Blast_Score=426, Evalue=1e-119,
Organism=Caenorhabditis elegans, GI71992381, Length=464, Percent_Identity=43.9655172413793, Blast_Score=407, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI71992392, Length=381, Percent_Identity=48.2939632545932, Blast_Score=383, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17534361, Length=427, Percent_Identity=25.9953161592506, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17556096, Length=456, Percent_Identity=25.8771929824561, Blast_Score=113, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6320027, Length=433, Percent_Identity=41.8013856812933, Blast_Score=338, Evalue=1e-93,
Organism=Saccharomyces cerevisiae, GI6320023, Length=468, Percent_Identity=24.1452991452991, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320764, Length=494, Percent_Identity=24.8987854251012, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI18921117, Length=424, Percent_Identity=27.122641509434, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24639277, Length=424, Percent_Identity=27.122641509434, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24639275, Length=424, Percent_Identity=27.122641509434, Blast_Score=153, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24653753, Length=492, Percent_Identity=27.2357723577236, Blast_Score=130, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50331; Mature: 50331

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHPAQPAATRRPLPPAMLDALRAAFGERVSTAEAVRAHHGRDESPFDPQLPDAVVFAHS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC
ADDVREVVSLCSLYSVPLIPYGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTV
HHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCEEEHHHCCCEEEECCCCEEEEE
EPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLTAVL
CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHEEEC
ADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPSMG
CCCEEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCC
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHH
LVQALAGQNNGQGFEWATRPEDRSRLWAARHNAYFAMLQLKPGCRAVTTDVCVPISQLAA
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCEEHHHHHHHHHHHHH
CVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEEIAEAEHINDRIVERALRLGG
HHHHHHCCEECCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
TCTGEHGVGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
CCCCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHEECCHHHCCCCCEEEC
>Mature Secondary Structure
MNHPAQPAATRRPLPPAMLDALRAAFGERVSTAEAVRAHHGRDESPFDPQLPDAVVFAHS
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC
ADDVREVVSLCSLYSVPLIPYGAGSSLEGHLLAVRGGVSLDLSEMNRVLSINAEDLTVTV
HHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCCEEEHHHCCCEEEECCCCEEEEE
EPGITRKALNEALRDTGLFFPIDPGADASIGGMTATRASGTNAVRYGTMRENVLGLTAVL
CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHEEEC
ADGRVVKTGSRARKSSAGYDLTRLFVGSEGTLGVITEITLRLHPLPEAVSAAICTFPSMG
CCCEEEECCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCC
DAVRTVIETIQIGVPIARVEFVDALAVRSINRHSNLTLTEAPTLFFEFHGTEAGVKEQAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHHH
LVQALAGQNNGQGFEWATRPEDRSRLWAARHNAYFAMLQLKPGCRAVTTDVCVPISQLAA
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCEEHHHHHHHHHHHHH
CVEETEVDLRASSLPCPIVGHVGDGNFHVAILIDPDKPEEIAEAEHINDRIVERALRLGG
HHHHHHCCEECCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
TCTGEHGVGLHKMRFLPKEHGDNAIDTMRAIKLALDPRNLMNPGKIFTC
CCCCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHEECCHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]