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The map label for this gene is yebS [H]

Identifier: 78065277

GI number: 78065277

Start: 696273

End: 696938

Strand: Reverse

Name: yebS [H]

Synonym: Bcep18194_A3801

Alternate gene names: 78065277

Gene position: 696938-696273 (Counterclockwise)

Preceding gene: 78065282

Following gene: 78065276

Centisome position: 18.87

GC content: 66.82

Gene sequence:

>666_bases
ATGCAACGAAACGACCTGATTGCCTGTCACGAGTGCGACGCACTGTTGCACAAACCGCGCCTGAGCGGACGTGAATCCGC
GCGCTGCCCGCGCTGCGACGCGCTGCTCTATCGCAACAGCGCCGCGCAGATCGAGCGGATCTGCGCGCTCGCGCTCGCGG
CGCTGATCACGTTCACGATCGCGCAGGTGTTCCCGATCCTCGAAATGGACGTGAACGGCAACCGCGTGCAGACCACGCTG
ATCGGTGCGATCGATTCATTGTGGCACCAGGACATGGCGATCGTCGGCGTGATGGTGTTCTGCTCGACCGTGCTGTTCCC
GCTCATCGAGATGGCCGCGCTGCTGTACCTGCTGCTGCCGATCCGGCGCGGCCTCGTCCCGCCCGGCTTCAACCTGGTGC
TGCGCGCGATCGAGCTCGTGCGGCCGTGGGGCATGATCGAGGTGTTCATGCTCGGGATCCTCGTGACCATCGTGAAGATG
GTCAGCCTCGCGCGTGTCGTTCCCGATGCCGCGCTGTTCGCATTCGCCGCGCTCACGCTGATGATCGCCGTCGTGCTGAT
GTTCGATCCGCGCACGCTGTGGGACATCGCCGACGACCTGCGCGCCGGTCGCGCGCCCGGGCAGCCCGACGATGCCGCCC
CGCTGCCGGAAGCCGCCCGCCGATGA

Upstream 100 bases:

>100_bases
CCGCGATCGTTGACACGCCGAAAAAGGCCTTTTGGTAAGATTGGCGCGGGTTCCGGCCCCGTCGACGCGTCTCCCCAGCC
GTCGCACAACTGCTTTTTCC

Downstream 100 bases:

>100_bases
CGATCCCGACCGCCGCCCGCGAGGGCTATGTCAGTTGCCACACCTGCGGGCTCGTGCAGACGCTCGACCATCCGCATGCA
CACTGCGCGCGCTGCGGCGC

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQRNDLIACHECDALLHKPRLSGRESARCPRCDALLYRNSAAQIERICALALAALITFTIAQVFPILEMDVNGNRVQTTL
IGAIDSLWHQDMAIVGVMVFCSTVLFPLIEMAALLYLLLPIRRGLVPPGFNLVLRAIELVRPWGMIEVFMLGILVTIVKM
VSLARVVPDAALFAFAALTLMIAVVLMFDPRTLWDIADDLRAGRAPGQPDDAAPLPEAARR

Sequences:

>Translated_221_residues
MQRNDLIACHECDALLHKPRLSGRESARCPRCDALLYRNSAAQIERICALALAALITFTIAQVFPILEMDVNGNRVQTTL
IGAIDSLWHQDMAIVGVMVFCSTVLFPLIEMAALLYLLLPIRRGLVPPGFNLVLRAIELVRPWGMIEVFMLGILVTIVKM
VSLARVVPDAALFAFAALTLMIAVVLMFDPRTLWDIADDLRAGRAPGQPDDAAPLPEAARR
>Mature_221_residues
MQRNDLIACHECDALLHKPRLSGRESARCPRCDALLYRNSAAQIERICALALAALITFTIAQVFPILEMDVNGNRVQTTL
IGAIDSLWHQDMAIVGVMVFCSTVLFPLIEMAALLYLLLPIRRGLVPPGFNLVLRAIELVRPWGMIEVFMLGILVTIVKM
VSLARVVPDAALFAFAALTLMIAVVLMFDPRTLWDIADDLRAGRAPGQPDDAAPLPEAARR

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=194, Percent_Identity=29.3814432989691, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787183, Length=196, Percent_Identity=25.5102040816327, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 24342; Mature: 24342

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRNDLIACHECDALLHKPRLSGRESARCPRCDALLYRNSAAQIERICALALAALITFTI
CCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AQVFPILEMDVNGNRVQTTLIGAIDSLWHQDMAIVGVMVFCSTVLFPLIEMAALLYLLLP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRGLVPPGFNLVLRAIELVRPWGMIEVFMLGILVTIVKMVSLARVVPDAALFAFAALTL
HHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIAVVLMFDPRTLWDIADDLRAGRAPGQPDDAAPLPEAARR
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MQRNDLIACHECDALLHKPRLSGRESARCPRCDALLYRNSAAQIERICALALAALITFTI
CCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AQVFPILEMDVNGNRVQTTLIGAIDSLWHQDMAIVGVMVFCSTVLFPLIEMAALLYLLLP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRGLVPPGFNLVLRAIELVRPWGMIEVFMLGILVTIVKMVSLARVVPDAALFAFAALTL
HHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIAVVLMFDPRTLWDIADDLRAGRAPGQPDDAAPLPEAARR
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]