Click here to switch to the map view.

The map label for this gene is yobV [H]

Identifier: 78065267

GI number: 78065267

Start: 687018

End: 687704

Strand: Reverse

Name: yobV [H]

Synonym: Bcep18194_A3791

Alternate gene names: 78065267

Gene position: 687704-687018 (Counterclockwise)

Preceding gene: 78065268

Following gene: 78065265

Centisome position: 18.62

GC content: 69.72

Gene sequence:

>687_bases
ATGACGCGCCGTGCCGACCGCCTGTTCCAGATCGCCGAGCTGCTGCGCGGGCGTCGTCTCACGACCGCGCAGCAGCTGGC
CGACTGGCTGTCGGTGTCGCCGCGCACGGTCTATCGCGACGTGCGCGACCTGCAACTGTCAGGGGTGCCGATCGAAGGCG
AAGCCGGCATCGGCTACCGGCTGAACCGCAACGCGAGCCTGCCGCCGCTCACGTTCACGGCCGAGGAGCTCGCCGCGCTC
GCCACCGGCGCACGCATGCTCGAAACCTGGGGCGGTGCGCGCTTCGCAAGCGGCGCGCGTTCGGCCCTCGCGAAGATCGC
GTCGGCGATGCCGGCCGACAAGCGCACGGCGCTCGACCGCCTGCCGGTGTTCGCGCCGTCGTTCCACATCGACGAGACGT
TTTGCGCGAAGGTCGACGCGATCCATCAGGCCATCGACACGCACCACGTCGTCAGCTTCGACTACCGCGACCGGCTCGGC
GCGCATTCGCAACGCCGCGTGTGGCCGCTCGGGCTCGTCTACTGGGGCGGGCGCTGGACGATCGGCGCGTGGTGCGAGCT
GCGCGGCGATTTCCGCACCTTCGACATCGCGCGGATGGGCGACATCATCGTGCACGAGCAGTTTCCGGACATGGAAGGAC
GGCGGATCGCCGACTACATGCGGATCGCGGAAGCACCGATGCGCTGA

Upstream 100 bases:

>100_bases
GGCCTGCACGCGCCGAAATGCCACTGAGCGCAGCGGCCATCGGGCGCGCGCGGCGCTATCATCGCGAAGTCCCCACTGCC
GTTGGAATCGAGGTGCCGTC

Downstream 100 bases:

>100_bases
CGCGCTGACGCGGCACGACGGCGTGCGCGTTGCGCGCCGCCGCCGTTCATGTTCCGGGCCGCCGTGCGGCGCCCGGCCCA
TCGTTCCCTACTCGCCGAAC

Product: transcriptional regulator-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRNASLPPLTFTAEELAAL
ATGARMLETWGGARFASGARSALAKIASAMPADKRTALDRLPVFAPSFHIDETFCAKVDAIHQAIDTHHVVSFDYRDRLG
AHSQRRVWPLGLVYWGGRWTIGAWCELRGDFRTFDIARMGDIIVHEQFPDMEGRRIADYMRIAEAPMR

Sequences:

>Translated_228_residues
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRNASLPPLTFTAEELAAL
ATGARMLETWGGARFASGARSALAKIASAMPADKRTALDRLPVFAPSFHIDETFCAKVDAIHQAIDTHHVVSFDYRDRLG
AHSQRRVWPLGLVYWGGRWTIGAWCELRGDFRTFDIARMGDIIVHEQFPDMEGRRIADYMRIAEAPMR
>Mature_227_residues
TRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYRLNRNASLPPLTFTAEELAALA
TGARMLETWGGARFASGARSALAKIASAMPADKRTALDRLPVFAPSFHIDETFCAKVDAIHQAIDTHHVVSFDYRDRLGA
HSQRRVWPLGLVYWGGRWTIGAWCELRGDFRTFDIARMGDIIVHEQFPDMEGRRIADYMRIAEAPMR

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 25712; Mature: 25581

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYR
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEE
LNRNASLPPLTFTAEELAALATGARMLETWGGARFASGARSALAKIASAMPADKRTALDR
ECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
LPVFAPSFHIDETFCAKVDAIHQAIDTHHVVSFDYRDRLGAHSQRRVWPLGLVYWGGRWT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECHHHHHCCCCCCCEEEEEEEEECCEEE
IGAWCELRGDFRTFDIARMGDIIVHEQFPDMEGRRIADYMRIAEAPMR
EEEEEEECCCCCEEHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRRADRLFQIAELLRGRRLTTAQQLADWLSVSPRTVYRDVRDLQLSGVPIEGEAGIGYR
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCCEE
LNRNASLPPLTFTAEELAALATGARMLETWGGARFASGARSALAKIASAMPADKRTALDR
ECCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
LPVFAPSFHIDETFCAKVDAIHQAIDTHHVVSFDYRDRLGAHSQRRVWPLGLVYWGGRWT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECHHHHHCCCCCCCEEEEEEEEECCEEE
IGAWCELRGDFRTFDIARMGDIIVHEQFPDMEGRRIADYMRIAEAPMR
EEEEEEECCCCCEEHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]