Click here to switch to the map view.

The map label for this gene is 78065248

Identifier: 78065248

GI number: 78065248

Start: 666849

End: 667985

Strand: Reverse

Name: 78065248

Synonym: Bcep18194_A3772

Alternate gene names: NA

Gene position: 667985-666849 (Counterclockwise)

Preceding gene: 78065249

Following gene: 78065244

Centisome position: 18.08

GC content: 67.99

Gene sequence:

>1137_bases
ATGCCCGCGATGCCACGCCTGCCGATCCGTTTCGCCCTTGCCGCCAGCCTGTCCACCGTTTTCGCCCTTTCCGCCTGCGG
AGGCGACGATGTCGCCGCCGTCGCGCGTTCGGACGCGCAAACGCCATCCGGCGGCACCCCGACCACGCCGGCCCCCACGC
CGCCGGCCACCGTCACGCCGCAACCGGGCAAGTGGAAGGCCGCTCGCGCGGGCGACCTGATCGACGTGACGCTCGGCGAC
CTCCACCCGACGCAGGGCGCGATCGGCTACGACCAGATCTACTACAAGCTCGGCCGCTACGAACTGCAGCCCGACAAGAA
ATTTGACGACTTCTGCGCGGACGAAGGCCTCGTCGGCGTCGCATCGAGCGGCTATACGGCCAAGTCGACGCTGCGCGATC
CCGCGAGCTACACGTGCACGACCACCGATGCGAACGCCCGCGACCGCTCGGTGCTGAACCCGGTCGTGATCGGCCCGAAT
GGCGATGCGCTGTACCTGACCGACGGCCATCACGGCCTGTCGACCTACTACGAGACGCCCGACGGCGGCCCGGCGCTGCA
CGTACACGTCGTCGTCAAGGACAACCTCAGCGACTACTCGGGCGACGCGTTCTGGCAGCAGATGCAGAGCCGCGGCTATC
TGCGCCTCAAGAACGGCGAAGGCAAGCCGATCACGACCGCGCAACTGCCGACCGGGCTCGGCCTGAAACTCGGGATGACG
AACGACCGCTACCGCTCGCTCGTCTATTTCACGCGCGACATCGGCTACAGCAAGCCCGCACAAGCGACCGACTATCTCGA
GTTCTACTGGGCCGACTGGCTGCGCGCGCAACCGGGCACGTTCGCGCTCACCGGCTATGACCTGACGCGCGCCGGCACAA
CCGACCCGGATCCGGCGAAGGCCGACACGGGCTACCTGAACGCGGTCTGGAATGCGTCGACGCGCATGGTCGCGGCCACG
GACCCGGTGATCGACGGCAAGACGGGCGCCGACCTCGGCCGCGCGGACGCGATCAACGGCGGGAAGAAATACAGCAAGGG
GGAGTTCGACAAGCTGCGCCAGCCGATCACGGCGGACAAGCCCGGCAAGATCGCGTACGCGCTCGACTACAAGACGCGCC
ACGCGCTGCCGCAGTAA

Upstream 100 bases:

>100_bases
TGTGACAAGCTGACGGGCTTGCACCCGCGCACGGTCGCCCGTGCCGCACGTCCCGCCTGTCGTGACCCGCGCGGTGTCCC
GCCCACCCGACCGACACCCG

Downstream 100 bases:

>100_bases
GGCAAGCGGCAACCGCCACGCAGGAAGGACACCCCGGCCGGCAATGCCGGACGGGGCCTGCTGGCTCAGAGCACCTTGCG
GTACCCGTCGTCGTCGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: ParB-Like Nuclease Family Protein; ParB-Like Nuclease

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPAMPRLPIRFALAASLSTVFALSACGGDDVAAVARSDAQTPSGGTPTTPAPTPPATVTPQPGKWKAARAGDLIDVTLGD
LHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLVGVASSGYTAKSTLRDPASYTCTTTDANARDRSVLNPVVIGPN
GDALYLTDGHHGLSTYYETPDGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGKPITTAQLPTGLGLKLGMT
NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPGTFALTGYDLTRAGTTDPDPAKADTGYLNAVWNASTRMVAAT
DPVIDGKTGADLGRADAINGGKKYSKGEFDKLRQPITADKPGKIAYALDYKTRHALPQ

Sequences:

>Translated_378_residues
MPAMPRLPIRFALAASLSTVFALSACGGDDVAAVARSDAQTPSGGTPTTPAPTPPATVTPQPGKWKAARAGDLIDVTLGD
LHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLVGVASSGYTAKSTLRDPASYTCTTTDANARDRSVLNPVVIGPN
GDALYLTDGHHGLSTYYETPDGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGKPITTAQLPTGLGLKLGMT
NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPGTFALTGYDLTRAGTTDPDPAKADTGYLNAVWNASTRMVAAT
DPVIDGKTGADLGRADAINGGKKYSKGEFDKLRQPITADKPGKIAYALDYKTRHALPQ
>Mature_377_residues
PAMPRLPIRFALAASLSTVFALSACGGDDVAAVARSDAQTPSGGTPTTPAPTPPATVTPQPGKWKAARAGDLIDVTLGDL
HPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLVGVASSGYTAKSTLRDPASYTCTTTDANARDRSVLNPVVIGPNG
DALYLTDGHHGLSTYYETPDGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGKPITTAQLPTGLGLKLGMTN
DRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPGTFALTGYDLTRAGTTDPDPAKADTGYLNAVWNASTRMVAATD
PVIDGKTGADLGRADAINGGKKYSKGEFDKLRQPITADKPGKIAYALDYKTRHALPQ

Specific function: Unknown

COG id: COG4318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40572; Mature: 40440

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMPRLPIRFALAASLSTVFALSACGGDDVAAVARSDAQTPSGGTPTTPAPTPPATVTP
CCCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QPGKWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLVGV
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHCCCCCEEE
ASSGYTAKSTLRDPASYTCTTTDANARDRSVLNPVVIGPNGDALYLTDGHHGLSTYYETP
ECCCCCCHHHCCCCCCEEEECCCCCCCCHHCCCCEEECCCCCEEEEECCCCCCCEEEECC
DGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGKPITTAQLPTGLGLKLGMT
CCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCEEECCC
NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPGTFALTGYDLTRAGTTDPDPAK
CHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCC
ADTGYLNAVWNASTRMVAATDPVIDGKTGADLGRADAINGGKKYSKGEFDKLRQPITADK
CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
PGKIAYALDYKTRHALPQ
CCCEEEEEECHHHCCCCC
>Mature Secondary Structure 
PAMPRLPIRFALAASLSTVFALSACGGDDVAAVARSDAQTPSGGTPTTPAPTPPATVTP
CCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
QPGKWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYKLGRYELQPDKKFDDFCADEGLVGV
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCEEECCCCCHHHHHCCCCCEEE
ASSGYTAKSTLRDPASYTCTTTDANARDRSVLNPVVIGPNGDALYLTDGHHGLSTYYETP
ECCCCCCHHHCCCCCCEEEECCCCCCCCHHCCCCEEECCCCCEEEEECCCCCCCEEEECC
DGGPALHVHVVVKDNLSDYSGDAFWQQMQSRGYLRLKNGEGKPITTAQLPTGLGLKLGMT
CCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCEEECCC
NDRYRSLVYFTRDIGYSKPAQATDYLEFYWADWLRAQPGTFALTGYDLTRAGTTDPDPAK
CHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCC
ADTGYLNAVWNASTRMVAATDPVIDGKTGADLGRADAINGGKKYSKGEFDKLRQPITADK
CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
PGKIAYALDYKTRHALPQ
CCCEEEEEECHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA