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The map label for this gene is yafJ [C]

Identifier: 78065237

GI number: 78065237

Start: 657339

End: 658250

Strand: Reverse

Name: yafJ [C]

Synonym: Bcep18194_A3761

Alternate gene names: 78065237

Gene position: 658250-657339 (Counterclockwise)

Preceding gene: 78065239

Following gene: 78065236

Centisome position: 17.82

GC content: 65.46

Gene sequence:

>912_bases
ATGTGCCAACTCTTAGGAATGAACTGCGCCGCGCCGACGGACGTCACATTCTCCTTCACAGGTTTCGCGGCCCGGGGCGG
GCTCACCGATCACCACGCCGACGGCTGGGGCATCGCGTTCTTCGAAGATAAAGCCTGCCGCCTGTTCATCGATCACCAGG
CCTCGGCCACGTCGCCGATCGCCGAAATGGTGAAGCGCTACCCGATCAAGTCCAAGAACACGATCGCGCACATCCGCAAG
GCGACGCAAGGCCACATCCTGCTCGAGAACAGCCATCCGTTCATGCGCGAGCTGTGGGGCCGGCACTGGATCTTCGCGCA
TAACGGCGACCTGCAGGACTACGCACCGGACATGGACGGCAGCGTCTACCATCCGGTCGGCACGACCGACAGCGAACAGG
CATTCTGCGTGCTGATGCAGGGACTGCGCGCAGCATTCCCCGGCGCGCAGCCGCCGTTGCCCGAACTGTTCGAGCGCGTC
GGCGAGCTGACGCGCGGGATCACCGATCACGGCGTGTTCAACTTCCTGATGTCGAACGGCCAGGCGCTGTTCGCGCACTG
CTCGACGCGGCTGCACTACCTCGTGCGGCGCTGGCCGTTCTCGACCGCGCATCTCGTCGACGAAGACCTGTCGATCGACT
TCGCGAAATACACGACGCCCGAGGATCGCGTCGCGGTGATCGCGACGCAGCCGCTCACGGACAACGAGGTCTGGACCGCA
TTCGAGCCGGGCGAGCTGATCATGTTCCAGTGCGGCGACGTCGCCGCACGGATGCAGATCCCGGTGCCCGAACGCGTGCT
CGAGAAGCTGCGCAATCCGGCGCTCGACGCGTCGGCATCGGCGCCGCGCGACGCACGCGAGGCGCTCGCCACGGCCGCAG
AAGTCGATTCCGACGACGCAATCGACTTCTGA

Upstream 100 bases:

>100_bases
GCTTTTTACCGCTCAGGGCTCGGTGATATGCTAGAAGCCGCATTGTACCGGGGTTCGCCCGGTTCGTTACCCCCCGCCTC
AGCCTGCTGCCCCAAGTAAA

Downstream 100 bases:

>100_bases
GCCCGGCGCGCCAGCGCCCTCTTCCCTTCATCTTTTCGCTACTGCGCGGCAAATCGAAGGCTCGCCGCGCCCGATCGCGG
CGGTGGCGTCGTGCGCAGGC

Product: glutamine amidotransferase, class-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MCQLLGMNCAAPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDHQASATSPIAEMVKRYPIKSKNTIAHIRK
ATQGHILLENSHPFMRELWGRHWIFAHNGDLQDYAPDMDGSVYHPVGTTDSEQAFCVLMQGLRAAFPGAQPPLPELFERV
GELTRGITDHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLVDEDLSIDFAKYTTPEDRVAVIATQPLTDNEVWTA
FEPGELIMFQCGDVAARMQIPVPERVLEKLRNPALDASASAPRDAREALATAAEVDSDDAIDF

Sequences:

>Translated_303_residues
MCQLLGMNCAAPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDHQASATSPIAEMVKRYPIKSKNTIAHIRK
ATQGHILLENSHPFMRELWGRHWIFAHNGDLQDYAPDMDGSVYHPVGTTDSEQAFCVLMQGLRAAFPGAQPPLPELFERV
GELTRGITDHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLVDEDLSIDFAKYTTPEDRVAVIATQPLTDNEVWTA
FEPGELIMFQCGDVAARMQIPVPERVLEKLRNPALDASASAPRDAREALATAAEVDSDDAIDF
>Mature_303_residues
MCQLLGMNCAAPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDHQASATSPIAEMVKRYPIKSKNTIAHIRK
ATQGHILLENSHPFMRELWGRHWIFAHNGDLQDYAPDMDGSVYHPVGTTDSEQAFCVLMQGLRAAFPGAQPPLPELFERV
GELTRGITDHGVFNFLMSNGQALFAHCSTRLHYLVRRWPFSTAHLVDEDLSIDFAKYTTPEDRVAVIATQPLTDNEVWTA
FEPGELIMFQCGDVAARMQIPVPERVLEKLRNPALDASASAPRDAREALATAAEVDSDDAIDF

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786417, Length=253, Percent_Identity=50.5928853754941, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932 [H]

Pfam domain/function: PF00310 GATase_2 [H]

EC number: NA

Molecular weight: Translated: 33618; Mature: 33618

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQLLGMNCAAPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDHQASATSPI
CCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHH
AEMVKRYPIKSKNTIAHIRKATQGHILLENSHPFMRELWGRHWIFAHNGDLQDYAPDMDG
HHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCHHHHHHCCCEEEEEECCCHHHCCCCCCC
SVYHPVGTTDSEQAFCVLMQGLRAAFPGAQPPLPELFERVGELTRGITDHGVFNFLMSNG
CEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
QALFAHCSTRLHYLVRRWPFSTAHLVDEDLSIDFAKYTTPEDRVAVIATQPLTDNEVWTA
CEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHCCCCCCCCEEEEEECCCCCCCCEEE
FEPGELIMFQCGDVAARMQIPVPERVLEKLRNPALDASASAPRDAREALATAAEVDSDDA
ECCCCEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
IDF
CCC
>Mature Secondary Structure
MCQLLGMNCAAPTDVTFSFTGFAARGGLTDHHADGWGIAFFEDKACRLFIDHQASATSPI
CCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCHH
AEMVKRYPIKSKNTIAHIRKATQGHILLENSHPFMRELWGRHWIFAHNGDLQDYAPDMDG
HHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCHHHHHHCCCEEEEEECCCHHHCCCCCCC
SVYHPVGTTDSEQAFCVLMQGLRAAFPGAQPPLPELFERVGELTRGITDHGVFNFLMSNG
CEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCC
QALFAHCSTRLHYLVRRWPFSTAHLVDEDLSIDFAKYTTPEDRVAVIATQPLTDNEVWTA
CEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEHCCCCCCCCEEEEEECCCCCCCCEEE
FEPGELIMFQCGDVAARMQIPVPERVLEKLRNPALDASASAPRDAREALATAAEVDSDDA
ECCCCEEEEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
IDF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]