| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is mpl [H]
Identifier: 78065168
GI number: 78065168
Start: 579270
End: 580619
Strand: Direct
Name: mpl [H]
Synonym: Bcep18194_A3692
Alternate gene names: 78065168
Gene position: 579270-580619 (Clockwise)
Preceding gene: 78065157
Following gene: 78065169
Centisome position: 15.68
GC content: 68.07
Gene sequence:
>1350_bases ATGGGCGGTCTCGCCGTACTCGCGCGCGAGGCGGGCCACACGGTGACGGGTTGCGACGCGGGCGTCTATCCGCCGATGAG CACGCAGCTCGAGGCGCAGGGCATCACGCTGATCGAGGGCTACGGCGCCGAGCAGATCGACCTGAAACCGGACCTGTTCG TGATCGGCAACGTCGTCACGCGCGGCAATCCGCTGATGGAAGCAATCCTGGATCGCGGCCTGCCGTACGTGTCGGGCCCG CAGTGGCTCGGCGAGCACGTGCTGGCCGGCAAATGGGTGCTCGCGGTCGCGGGCACGCACGGCAAGACCACCACGTCGTC GATGCTTGCGTGGCTGCTGGAAGACTCGGGCCTGAATCCGGGCTTCCTGATCGGCGGCGTGCCGCTGAACTTCGGCGTGT CGGCGCGGCTCACCGATTCGAGCTTCTTCGTGATCGAGGCCGACGAATACGATACGGCGTTCTTCGACAAGCGCTCGAAG TTCGTCCACTATCGGCCGCGCACCGCGGTGCTGAACAATCTCGAATTCGATCACGCCGACATCTTCCCGGATCTCGCCGC GATCGAGACGCAATTCCACCATCTCGTCCGTACCGTGCCCGGTGTCGGCCGGATCGTCACGAACGGCCGCTCGGACGCGC TCGAGCGCGTGCTGGCGCGCGGTTGCTGGAGCGAGGTCGAGCGGTTCGGCGTCGACGGCGGCTGGCAGGCGCTGCCGGCC GAGGACGGTGTGCCGGTCGACGAGCGCTTCGCGGTGTATTCGCACGCGGAACGTGTCGGTGAAGTTACGTGGCAAGTACA GGGCGATCACAACCGGATGAACGCGCTCGCGGCGATCGCGGCTGCGCGCCACGTCGGTGTGCCGCCCGCGCAGGCGGCCG AATCCCTCGCGTCGTTCCGCAACGTGAAGCGCCGGATGGAAGTGCGCGGCAGCGTGGACGGCGTGACCGTCTACGACGAC TTCGCGCACCATCCGACCGCGATCGAAACCACGATCGCCGGCCTTCGTGCACGCATCGGCAGCGAGAATGCTCGCATCCT CGCCGTGCTCGAGCCGCGTTCGAACACGATGAAGCTCGGCGTGATGAAGTCGCAATTGCCGGCGAGCCTGGCCGATGCCG ATCTCGTGTTCGGCTACGGCGCGCCGACCGGGCGCGACGCGCTCGGCTGGAACCTGGCCGAGGCGCTGGCGCCGCTGGGC GAGAAGGCGCACGCATTCGACGATCTGCACCTGCTGGTGAAGTCCGTCGTCGCAGCCGCGCGCCCGGGCGACCACGTGCT CGTGATGAGCAACGGCGGCTTCGGCGGCGTGCACCAGAAGCTGCTCGATGCGCTCGGGAGCCGCACGTGA
Upstream 100 bases:
>100_bases CCGCCGCGCCGCACACGCATCCTTTCCGAATCGACGGCGCCCGGCGGCGCGAAAGCATTCATCTATGCACATCCACATTC TTGGCATCTGCGGCACCTTC
Downstream 100 bases:
>100_bases TCCTGTACCTGCACGGCTTCCGGTCGTCGCCGGAATCGCAGAAGTCGCGCCAGCTCGCCGCGCGCATGGCCGAGCTCGGC CGCACCGACGAGTGGCGGTG
Product: UDP-N-acetylmuramate/L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Products: NA
Alternate protein names: Murein peptide ligase [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDLKPDLFVIGNVVTRGNPLMEAILDRGLPYVSGP QWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEDSGLNPGFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSK FVHYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVTNGRSDALERVLARGCWSEVERFGVDGGWQALPA EDGVPVDERFAVYSHAERVGEVTWQVQGDHNRMNALAAIAAARHVGVPPAQAAESLASFRNVKRRMEVRGSVDGVTVYDD FAHHPTAIETTIAGLRARIGSENARILAVLEPRSNTMKLGVMKSQLPASLADADLVFGYGAPTGRDALGWNLAEALAPLG EKAHAFDDLHLLVKSVVAAARPGDHVLVMSNGGFGGVHQKLLDALGSRT
Sequences:
>Translated_449_residues MGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDLKPDLFVIGNVVTRGNPLMEAILDRGLPYVSGP QWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEDSGLNPGFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSK FVHYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVTNGRSDALERVLARGCWSEVERFGVDGGWQALPA EDGVPVDERFAVYSHAERVGEVTWQVQGDHNRMNALAAIAAARHVGVPPAQAAESLASFRNVKRRMEVRGSVDGVTVYDD FAHHPTAIETTIAGLRARIGSENARILAVLEPRSNTMKLGVMKSQLPASLADADLVFGYGAPTGRDALGWNLAEALAPLG EKAHAFDDLHLLVKSVVAAARPGDHVLVMSNGGFGGVHQKLLDALGSRT >Mature_448_residues GGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDLKPDLFVIGNVVTRGNPLMEAILDRGLPYVSGPQ WLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEDSGLNPGFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSKF VHYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVTNGRSDALERVLARGCWSEVERFGVDGGWQALPAE DGVPVDERFAVYSHAERVGEVTWQVQGDHNRMNALAAIAAARHVGVPPAQAAESLASFRNVKRRMEVRGSVDGVTVYDDF AHHPTAIETTIAGLRARIGSENARILAVLEPRSNTMKLGVMKSQLPASLADADLVFGYGAPTGRDALGWNLAEALAPLGE KAHAFDDLHLLVKSVVAAARPGDHVLVMSNGGFGGVHQKLLDALGSRT
Specific function: Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramic acid [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1790680, Length=448, Percent_Identity=59.5982142857143, Blast_Score=528, Evalue=1e-151, Organism=Escherichia coli, GI1786279, Length=362, Percent_Identity=27.9005524861878, Blast_Score=105, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005757 - InterPro: IPR016040 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: 6.3.2.- [C]
Molecular weight: Translated: 48105; Mature: 47974
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDLKPDLFVIGNVVT CCCCEEEEHHCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCEECCCCCEEEEECHHH RGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEDSGLNP CCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC GFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHAD CEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHCCCCEEEECCHHHHHCCCCCCHHH IFPDLAAIETQFHHLVRTVPGVGRIVTNGRSDALERVLARGCWSEVERFGVDGGWQALPA HCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCC EDGVPVDERFAVYSHAERVGEVTWQVQGDHNRMNALAAIAAARHVGVPPAQAAESLASFR CCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NVKRRMEVRGSVDGVTVYDDFAHHPTAIETTIAGLRARIGSENARILAVLEPRSNTMKLG HHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEE VMKSQLPASLADADLVFGYGAPTGRDALGWNLAEALAPLGEKAHAFDDLHLLVKSVVAAA EEHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC RPGDHVLVMSNGGFGGVHQKLLDALGSRT CCCCEEEEEECCCCCHHHHHHHHHHCCCC >Mature Secondary Structure GGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDLKPDLFVIGNVVT CCCEEEEHHCCCEEECCCCCCCCCCCCCEECCCEEEEECCCCCEECCCCCEEEEECHHH RGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEDSGLNP CCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC GFLIGGVPLNFGVSARLTDSSFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHAD CEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHCCCCEEEECCHHHHHCCCCCCHHH IFPDLAAIETQFHHLVRTVPGVGRIVTNGRSDALERVLARGCWSEVERFGVDGGWQALPA HCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCC EDGVPVDERFAVYSHAERVGEVTWQVQGDHNRMNALAAIAAARHVGVPPAQAAESLASFR CCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NVKRRMEVRGSVDGVTVYDDFAHHPTAIETTIAGLRARIGSENARILAVLEPRSNTMKLG HHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEE VMKSQLPASLADADLVFGYGAPTGRDALGWNLAEALAPLGEKAHAFDDLHLLVKSVVAAA EEHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC RPGDHVLVMSNGGFGGVHQKLLDALGSRT CCCCEEEEEECCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 2843822; 7984428; 8808921 [H]