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The map label for this gene is pcp [H]

Identifier: 78065158

GI number: 78065158

Start: 570732

End: 571205

Strand: Reverse

Name: pcp [H]

Synonym: Bcep18194_A3682

Alternate gene names: 78065158

Gene position: 571205-570732 (Counterclockwise)

Preceding gene: 78065159

Following gene: 78065151

Centisome position: 15.46

GC content: 70.68

Gene sequence:

>474_bases
ATGTTGACGAAAAAGACCCTCACGCTCGCGGCCATGCTGACGGCCTCGCTGACGCTCACCGGTTGCTTCACCGCACCCGG
TTCGGCGGATGTCTATAGCGTCGGCCAGGCGCAGCGCGAACAGACGGTCCGCATGGGCACGGTCGAAAGCGTCCGCGCCG
TGCGCATCCAGTCCGACGGCGGCGGCAGCGCGATCGGCACGATCGGCGGCGGCGCACTCGGCGCGGTGGCAGGCAGCGCG
ATCGGCGGCGGCAAGGGGTCGATCCTGACCGCGATCGCCGGCGGCCTCGTCGGCGCGGTCGCGGGCAACGCGGTCGGCGA
AAACCTCAGCACGGCGAACGGTGTCGAAATCACCGTGCGCCTCGACAACGGCGATCTGCGCTCGATCACGCAGGCAGCAA
GCGGCGAAGCGTTCCGCGCCGGCGAGCGCGTGCGACTGCTGTCGAGCGGCGGCGTCACGCGCGTCACGCACTAA

Upstream 100 bases:

>100_bases
CAGGGGCCCCAGACTTACGTACTGACGCGCGCCGAGATCGACGCGCGCTTCGAGACTGCATTCGGTTACAGTCTCAAATG
AATTTTGTGGGAGAGCAAAG

Downstream 100 bases:

>100_bases
CGGGTACCTCAGCTCGCGGCGCAAGCCGCGGTCGAACGCATGTGCGAAGCTGCACATGCGTTTTTTTTCGTCCGTACCCG
CCGCAACCGGCATACGGGCA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: 15 kDa lipoprotein; PAL cross-reacting lipoprotein [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLTKKTLTLAAMLTASLTLTGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDGGGSAIGTIGGGALGAVAGSA
IGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVRLDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH

Sequences:

>Translated_157_residues
MLTKKTLTLAAMLTASLTLTGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDGGGSAIGTIGGGALGAVAGSA
IGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVRLDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH
>Mature_157_residues
MLTKKTLTLAAMLTASLTLTGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDGGGSAIGTIGGGALGAVAGSA
IGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVRLDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=150, Percent_Identity=36, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15373; Mature: 15373

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKKTLTLAAMLTASLTLTGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDG
CCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCC
GGSAIGTIGGGALGAVAGSAIGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVR
CCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
LDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH
ECCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEECC
>Mature Secondary Structure
MLTKKTLTLAAMLTASLTLTGCFTAPGSADVYSVGQAQREQTVRMGTVESVRAVRIQSDG
CCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCC
GGSAIGTIGGGALGAVAGSAIGGGKGSILTAIAGGLVGAVAGNAVGENLSTANGVEITVR
CCCEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
LDNGDLRSITQAASGEAFRAGERVRLLSSGGVTRVTH
ECCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 7542800 [H]