| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is trpD
Identifier: 78065095
GI number: 78065095
Start: 493172
End: 494203
Strand: Reverse
Name: trpD
Synonym: Bcep18194_A3619
Alternate gene names: 78065095
Gene position: 494203-493172 (Counterclockwise)
Preceding gene: 78065096
Following gene: 78065094
Centisome position: 13.38
GC content: 65.7
Gene sequence:
>1032_bases ATGACGATTACCCCGCAGGAAGCGCTGCAGCGCACGATCGAACACCGCGAGATCTTCCACGACGAGATGCTGCACCTGAT GCGGCTCATCATGCGCGGCGACATGTCGCCCGTGATGGCGGCCGCGATCATCACCGGGCTGCGCGTGAAGAAGGAGACGA TCGGCGAGATCGCCGCCGCCGCAACCGTGATGCGCGAATTCGCGAATCACGTCGAGGTGCAGGACAACTCGAACTTCGTC GACATCGTCGGCACCGGCGGCGACGGCTCGCACACGTTCAACATCTCGACCGCGTCGATGTTCGTCACGGCCGCGGCCGG CGCGAAAGTCGCGAAGCACGGCAACCGCGGCGTATCGAGCAAGTCCGGCAGCGCCGACGTGCTCGAGGCGCTCGGCGTGA ACATCGACCTGCAGTCCGACCAGGTTGCCGCATCGATCGCCGAAACGGGCATGGGCTTCATGTTCGCGCCGAACCATCAC CCGGCGATGAAGAACATCGCGGCCGTGCGCCGCGAGCTCGGCGTGCGCACGATCTTCAACATCCTCGGCCCGCTGACCAA TCCGGCCGGCGCGCCGAACCAGTTGATGGGCGTGTTCCACCCCGACCTCGTCGGCATCCAGGTGCGCGTGATGCAGCGTC TGGGCGCGCAGCATGTGCTCGTCGTGTACGGCAAGGACGGGATGGACGAGGTATCGCTCGGCGCGGCAACGCTCGTCGGC GAGCTGCGCGACGGCAAGGTGCACGAATACGAGATCCATCCGGAAGACTTCGGCCTGCAGATGGTGTCGAACCGCACGCT GAAGGTGGAAAATGCCGACGAATCGCGCACGATGATGCTCGGCGCGCTGGACAACCAGCCGAGCGTCGCACGCGAGATCG TCACGCTGAACGCGGGTACCGCGCTCTATGCGGCGAACGTCGCCGAATCGATCGCGGACGGCATCCAGCTCGCCCGCGAA GCGATCGCGAGCGGCAAGGCCCGCGCGAAAGTCGACGAACTCGTGCGCTTCACGCAGCAGTTCAAGCGCTGA
Upstream 100 bases:
>100_bases CCGGAATCGATCCTGTCCGAGCATGGCCACGCGCTGCTCGAGAATTTCCTGAAGCAGGCACGCGCCGCGGCCGCGCAAGC CGCCTGACGGGAGCCTCACG
Downstream 100 bases:
>100_bases CTCCCCTTACGAATCAAGCAGGAATCCACATGAGCGACATTCTCGACCGAATCATCGCCGTCAAGCGCGAAGAAGTCGCA GCGGCCATGCGCAGCGCGCC
Product: anthranilate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFV DIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHH PAMKNIAAVRRELGVRTIFNILGPLTNPAGAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG ELRDGKVHEYEIHPEDFGLQMVSNRTLKVENADESRTMMLGALDNQPSVAREIVTLNAGTALYAANVAESIADGIQLARE AIASGKARAKVDELVRFTQQFKR
Sequences:
>Translated_343_residues MTITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFV DIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHH PAMKNIAAVRRELGVRTIFNILGPLTNPAGAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG ELRDGKVHEYEIHPEDFGLQMVSNRTLKVENADESRTMMLGALDNQPSVAREIVTLNAGTALYAANVAESIADGIQLARE AIASGKARAKVDELVRFTQQFKR >Mature_342_residues TITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVD IVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHHP AMKNIAAVRRELGVRTIFNILGPLTNPAGAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVGE LRDGKVHEYEIHPEDFGLQMVSNRTLKVENADESRTMMLGALDNQPSVAREIVTLNAGTALYAANVAESIADGIQLAREA IASGKARAKVDELVRFTQQFKR
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=331, Percent_Identity=39.8791540785499, Blast_Score=208, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6320561, Length=358, Percent_Identity=27.6536312849162, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005940 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 [H]
Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]
EC number: =2.4.2.18 [H]
Molecular weight: Translated: 36860; Mature: 36729
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSS HHHHHHHHHHEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCHHHHCCCCCCCC KSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFN CCCCHHHHHHHCCCEEECCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH ILGPLTNPAGAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG HHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH ELRDGKVHEYEIHPEDFGLQMVSNRTLKVENADESRTMMLGALDNQPSVAREIVTLNAGT HHCCCCEEEEEECCHHCCCEEECCCEEEEECCCCCCEEEEEECCCCCHHHHHHEEECCCC ALYAANVAESIADGIQLAREAIASGKARAKVDELVRFTQQFKR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TITPQEALQRTIEHREIFHDEMLHLMRLIMRGDMSPVMAAAIITGLRVKKETIGEIAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSS HHHHHHHHHHEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCHHHHCCCCCCCC KSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFN CCCCHHHHHHHCCCEEECCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH ILGPLTNPAGAPNQLMGVFHPDLVGIQVRVMQRLGAQHVLVVYGKDGMDEVSLGAATLVG HHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH ELRDGKVHEYEIHPEDFGLQMVSNRTLKVENADESRTMMLGALDNQPSVAREIVTLNAGT HHCCCCEEEEEECCHHCCCEEECCCEEEEECCCCCCEEEEEECCCCCHHHHHHEEECCCC ALYAANVAESIADGIQLAREAIASGKARAKVDELVRFTQQFKR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA