Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78065090

Identifier: 78065090

GI number: 78065090

Start: 488150

End: 489949

Strand: Direct

Name: 78065090

Synonym: Bcep18194_A3614

Alternate gene names: NA

Gene position: 488150-489949 (Clockwise)

Preceding gene: 78065089

Following gene: 78065091

Centisome position: 13.21

GC content: 67.61

Gene sequence:

>1800_bases
ATGACCCAGCCGATCCGCTATTCGATTGTCCCGAAAGATCTTGCCGCGCACCTGTTCGAAGTGTCGGTGACGGTCACCGA
TCCCGACCCCGAAGGCCAGCGCTTTTCGCTGCCGGTGTGGATCCCGGGGAGCTACCTCGTGCGCGAGTTCGCGCGCAACA
TCGTGACGCTCGGCGCATTCAACGATGCGGGCCGCAAGGTGCGGATCGCGAAGACCGACAAGCACACGTGGCAGGCCGCG
CCCGTGAGCGGCACGCTGACGCTGCGCTACGACGTGTATGCATGGGACCTGTCGGTGCGCTCCGCGTATCTCGACGAATC
GGGCGGCTTCTTCAACGCGACGGCCGTGTTCCTGAGCGTCGCCGGCCGTGAGGACGCGCCGTGTGAAGTCGACATCGCGA
AGCCGGCCGGCGCGGCATTCCGCGCGTGGCGTGTCGGCACGTCGCTGCCCGAGGGGCGCGGCACCAAGCGTTATGCGTTC
GGCGCCTACCGCGCGTCGAACTACGACGAGCTCTCCGACCATCCGGTGACGATCGGCGAATTCGCGCTCGCGACGTTCGA
TGCGCACGGTGTGCCGCACGACATCGTGATCGCGGGGCGCGTGACGCAGCTCGACATGGAGCGCCTGCGCGCCGACCTGA
AGCGCGTGTGTGAAGCACAGATCGCGCTGTTCGAGCCGAAATCGAAGAAGGCGCCGATGGACCGCTACGTGTTCATGACG
CTGGCGGTCAGCGACGGCTACGGCGGCCTCGAGCACCGCGCGTCGACCGCGCTGATCTGCAACCGCACCGACCTGCCGGT
GAAGGGGCGGCCCGAAACGACGGAAGGCTATCGCACGTATCTCGGTCTCTGCAGCCACGAGTACTTCCACACGTGGAACG
TGAAGCGCATCAAGCCGGCGGCGTTCGTGCCGTACGACCTGTCGAAGGAAAACTACACGTCGCTGCTGTGGCTGTTCGAA
GGCTTCACGTCGTATTACGACGACCTGATGCTGGTGCGCAGCGGGCTGATGTCGCAGGACGAATATTTCGCGGCGCTCGG
CCGCACCGTCGGCGGTGTGCTGCGCGGCACGGGGCGCCTGAAGCAGAGCGTCGCCGACAGCTCGTTCGACGCATGGATCA
AGTACTACCGCCAGGACGAGAACGCGACCAACGCGATCGTCAGCTACTACACGAAGGGTTCGCTCGTCGCGCTCGCCTTC
GATCTCGCGATCCGCGCGCAGACGCGCAACAGGAAGTCGCTCGACGACGTGATGCGCCTGCTGTGGCAGCGCTACGGCCG
CGACTTCTACCGCGGCAAGCAGGCGGGCGTCGAGGAAGACGAAGTCGAGGCGCTGATCGAAGCGGCGACGGGCGTTGCGC
TCGGCCGTCTGTTCGCCGATGCCGTGCACGGCACGCGCGACCTGCCGCTCGCCGAACTGCTTGCACCGTTCGGCGTGACG
CTCGCGCCCGATGTCGTGAATGGCACGACCGCGAAGCCGACGATCGGCGCGCGCCTGCGCGGCGGCGCGGACTGCACGTT
CGCGGCTGTCTACGAAGGCGGCGCCGCACATCGCGCGGGGCTGTCGGCCGGCGACACGCTGATCGCGGTCGACGGGCTGC
GCGTCACGGGCACCAACCTCGACGCACTGCTCGCGCGCTACCGGCCGGGTGACAAGGTCGAGGTTCACGCGTTCCGGCGC
GACGAGCTGCGCACCGCGAAACTGAAGCTCGACGGCCCGGAAGTCACGCGCTACCGGCTGACGGCGGCGGCGAAGCCGGC
TGCGGTCTCGAAGGCCCGGGAGGCTTGGCTGAAGGGTTGA

Upstream 100 bases:

>100_bases
ACCACACGCCGGGCCGCATGGCCTGGCCAGCGAGGGGCGCCCGCATCTGCCGGCGCCTCTCTTCGTTTCCGCCGCCGTAT
TCGACCGACCGATTGCCACG

Downstream 100 bases:

>100_bases
GCGGTCTGAAGCGGGTATCGGGGCGGGATCAAGGATTGTTCTGCTGCTGCAACAATCCGTCGCCTTGAACCCGCTTTTTC
GCGGTCATGCGGCCACGCAC

Product: peptidase M61

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Trypsin-Like Serine Protease; Metallopeptidase; Aminopeptidase N Family Protein; PDZ Domain-Containing Protein; Protease With C-Terminal PDZ Domain-Containing Protein; Glycyl Aminopeptidase; PDZ/DHR/GLGFPeptidase M; Signaling Protein; M61 Glycyl Aminopeptidase Protein; PDZ Domain Protein; M61 Glycyl Aminopeptidase Family Protein; Protease With C-Terminal PDZ Domain

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MTQPIRYSIVPKDLAAHLFEVSVTVTDPDPEGQRFSLPVWIPGSYLVREFARNIVTLGAFNDAGRKVRIAKTDKHTWQAA
PVSGTLTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSVAGREDAPCEVDIAKPAGAAFRAWRVGTSLPEGRGTKRYAF
GAYRASNYDELSDHPVTIGEFALATFDAHGVPHDIVIAGRVTQLDMERLRADLKRVCEAQIALFEPKSKKAPMDRYVFMT
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPAAFVPYDLSKENYTSLLWLFE
GFTSYYDDLMLVRSGLMSQDEYFAALGRTVGGVLRGTGRLKQSVADSSFDAWIKYYRQDENATNAIVSYYTKGSLVALAF
DLAIRAQTRNRKSLDDVMRLLWQRYGRDFYRGKQAGVEEDEVEALIEAATGVALGRLFADAVHGTRDLPLAELLAPFGVT
LAPDVVNGTTAKPTIGARLRGGADCTFAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNLDALLARYRPGDKVEVHAFRR
DELRTAKLKLDGPEVTRYRLTAAAKPAAVSKAREAWLKG

Sequences:

>Translated_599_residues
MTQPIRYSIVPKDLAAHLFEVSVTVTDPDPEGQRFSLPVWIPGSYLVREFARNIVTLGAFNDAGRKVRIAKTDKHTWQAA
PVSGTLTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSVAGREDAPCEVDIAKPAGAAFRAWRVGTSLPEGRGTKRYAF
GAYRASNYDELSDHPVTIGEFALATFDAHGVPHDIVIAGRVTQLDMERLRADLKRVCEAQIALFEPKSKKAPMDRYVFMT
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPAAFVPYDLSKENYTSLLWLFE
GFTSYYDDLMLVRSGLMSQDEYFAALGRTVGGVLRGTGRLKQSVADSSFDAWIKYYRQDENATNAIVSYYTKGSLVALAF
DLAIRAQTRNRKSLDDVMRLLWQRYGRDFYRGKQAGVEEDEVEALIEAATGVALGRLFADAVHGTRDLPLAELLAPFGVT
LAPDVVNGTTAKPTIGARLRGGADCTFAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNLDALLARYRPGDKVEVHAFRR
DELRTAKLKLDGPEVTRYRLTAAAKPAAVSKAREAWLKG
>Mature_598_residues
TQPIRYSIVPKDLAAHLFEVSVTVTDPDPEGQRFSLPVWIPGSYLVREFARNIVTLGAFNDAGRKVRIAKTDKHTWQAAP
VSGTLTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSVAGREDAPCEVDIAKPAGAAFRAWRVGTSLPEGRGTKRYAFG
AYRASNYDELSDHPVTIGEFALATFDAHGVPHDIVIAGRVTQLDMERLRADLKRVCEAQIALFEPKSKKAPMDRYVFMTL
AVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPAAFVPYDLSKENYTSLLWLFEG
FTSYYDDLMLVRSGLMSQDEYFAALGRTVGGVLRGTGRLKQSVADSSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFD
LAIRAQTRNRKSLDDVMRLLWQRYGRDFYRGKQAGVEEDEVEALIEAATGVALGRLFADAVHGTRDLPLAELLAPFGVTL
APDVVNGTTAKPTIGARLRGGADCTFAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNLDALLARYRPGDKVEVHAFRRD
ELRTAKLKLDGPEVTRYRLTAAAKPAAVSKAREAWLKG

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65990; Mature: 65859

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPIRYSIVPKDLAAHLFEVSVTVTDPDPEGQRFSLPVWIPGSYLVREFARNIVTLGAF
CCCCEEEEECCHHHHCEEEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHEEEEECC
NDAGRKVRIAKTDKHTWQAAPVSGTLTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSV
CCCCCEEEEEECCCCCEEECCCCCEEEEEEEEEEEEEEHHHHHCCCCCCEEEHEEEEEEE
AGREDAPCEVDIAKPAGAAFRAWRVGTSLPEGRGTKRYAFGAYRASNYDELSDHPVTIGE
CCCCCCCCEEEECCCCCCHHEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHH
FALATFDAHGVPHDIVIAGRVTQLDMERLRADLKRVCEAQIALFEPKSKKAPMDRYVFMT
HEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEE
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPA
EEEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEECCC
AFVPYDLSKENYTSLLWLFEGFTSYYDDLMLVRSGLMSQDEYFAALGRTVGGVLRGTGRL
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHH
KQSVADSSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRAQTRNRKSLDDVMRL
HHHHCCCHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEEEEHHEEECCCCCCCHHHHHHH
LWQRYGRDFYRGKQAGVEEDEVEALIEAATGVALGRLFADAVHGTRDLPLAELLAPFGVT
HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCE
LAPDVVNGTTAKPTIGARLRGGADCTFAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNL
ECCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEECCEEEECCCH
DALLARYRPGDKVEVHAFRRDELRTAKLKLDGPEVTRYRLTAAAKPAAVSKAREAWLKG
HHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TQPIRYSIVPKDLAAHLFEVSVTVTDPDPEGQRFSLPVWIPGSYLVREFARNIVTLGAF
CCCEEEEECCHHHHCEEEEEEEEEECCCCCCCEEEEEEEECHHHHHHHHHHHEEEEECC
NDAGRKVRIAKTDKHTWQAAPVSGTLTLRYDVYAWDLSVRSAYLDESGGFFNATAVFLSV
CCCCCEEEEEECCCCCEEECCCCCEEEEEEEEEEEEEEHHHHHCCCCCCEEEHEEEEEEE
AGREDAPCEVDIAKPAGAAFRAWRVGTSLPEGRGTKRYAFGAYRASNYDELSDHPVTIGE
CCCCCCCCEEEECCCCCCHHEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHH
FALATFDAHGVPHDIVIAGRVTQLDMERLRADLKRVCEAQIALFEPKSKKAPMDRYVFMT
HEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEE
LAVSDGYGGLEHRASTALICNRTDLPVKGRPETTEGYRTYLGLCSHEYFHTWNVKRIKPA
EEEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCEEECCC
AFVPYDLSKENYTSLLWLFEGFTSYYDDLMLVRSGLMSQDEYFAALGRTVGGVLRGTGRL
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHH
KQSVADSSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRAQTRNRKSLDDVMRL
HHHHCCCHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEEEEHHEEECCCCCCCHHHHHHH
LWQRYGRDFYRGKQAGVEEDEVEALIEAATGVALGRLFADAVHGTRDLPLAELLAPFGVT
HHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCE
LAPDVVNGTTAKPTIGARLRGGADCTFAAVYEGGAAHRAGLSAGDTLIAVDGLRVTGTNL
ECCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCHHHCCCCCCCEEEEECCEEEECCCH
DALLARYRPGDKVEVHAFRRDELRTAKLKLDGPEVTRYRLTAAAKPAAVSKAREAWLKG
HHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA