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The map label for this gene is ompA [H]

Identifier: 78065049

GI number: 78065049

Start: 441925

End: 442887

Strand: Reverse

Name: ompA [H]

Synonym: Bcep18194_A3573

Alternate gene names: 78065049

Gene position: 442887-441925 (Counterclockwise)

Preceding gene: 78065050

Following gene: 78065033

Centisome position: 11.99

GC content: 68.54

Gene sequence:

>963_bases
ATGCATCGCACGATTCACGTCCGGCGCGCGCGCTTTTCGGTCGCCTTCTCGCCCGCCGTCGCCGCCCTCCTCGCTGCCGG
GCTCTTCGCCAGCGGCGCGGCTTTCGCGCAGAATACGGGCGCGACCGTCACGCCGGTCGGCAACGGCACGGTCGCGACGA
CCGCGCTGTCCGCGAACACCGGCGCCGCACCGGGGACGGCCTCCGGCGCCGTCGTGCACGGCACGGCCGGCACCGCGAAC
ACCCTCACGCCGCCGCCCGCGACCGCGACGCCCGGCCAGGTGGTCGTCGGCGGCAAGGTGCCCGACGAGGCGACCAAGGC
CGCCGTGCTGCAGAAGCTGCGCGATACCTACGGCGCAACGAACGTCGTCGACCAGATCGAGGTGGGTGACGTTGCAACGC
CGCCGAACTGGAGCGCGAACGTGCAGAAGCTGCTCGGCGCGCAGCTCAAGCAGATCAGCAAGGGACAGCTGAAGATCAAC
GGCACGCAGATCGAGATGAAGGGCGAGGTGCACAACGAAGCGCAACGCCAGCAGCTCGCGAGCGACATGGCGAACACGCT
GAACCCGACGTATACGATCAAGAACGGGCTGCGCGTGTCGGCATCCGAACAGGGTGTGCTCGACCAGACGCTCGCGAACC
GGACGATCGAGTTCGAGACCGGCAGCGCGACGCTCACGCCGCAGGGCAGGCTGATCCTCGACCAGATGGCGGCCGCGCTC
GCGAAGATGCAGAACCGCACGGTCGACATCATCGGCCACACCGACAACTCGGGGAACCGTACGTCGAACATCGCGCTGAG
CCAGGCGCGCGCGGATGCGGTGAAGGGCTACCTGATCACGAAGAGCATTTTGCCGCAGCAGATGACGACGACGGGTGTCG
GGCCGGATCAGCCGATCGCGCCGAACGATACGGCGGATGGGCGGGCGAGGAATCGGCGGATCGAGTTCCGGGTGGGGCAG
TAG

Upstream 100 bases:

>100_bases
CACCAGATCAGCAAGCTCGTCAGCTACCTCGACCAACCGCAACTCTCGCTGCGCGTCGCCATCGACGCGTTCCGTGAAGC
GTTCATCGGAGGCTGACGGG

Downstream 100 bases:

>100_bases
GCGGGGCGTTTTGCCGCTTCGCGGAGCGGTGTTCGCATCGCTTCGTTGGATGCGGGTCGCGCGAGGGGTTGTCGGCAAGC
TGGCCCTTTGAACGCTCGCT

Product: OmpA/MotB family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MHRTIHVRRARFSVAFSPAVAALLAAGLFASGAAFAQNTGATVTPVGNGTVATTALSANTGAAPGTASGAVVHGTAGTAN
TLTPPPATATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKIN
GTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGRLILDQMAAAL
AKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSILPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRVGQ

Sequences:

>Translated_320_residues
MHRTIHVRRARFSVAFSPAVAALLAAGLFASGAAFAQNTGATVTPVGNGTVATTALSANTGAAPGTASGAVVHGTAGTAN
TLTPPPATATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKIN
GTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGRLILDQMAAAL
AKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSILPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRVGQ
>Mature_320_residues
MHRTIHVRRARFSVAFSPAVAALLAAGLFASGAAFAQNTGATVTPVGNGTVATTALSANTGAAPGTASGAVVHGTAGTAN
TLTPPPATATPGQVVVGGKVPDEATKAAVLQKLRDTYGATNVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKIN
GTQIEMKGEVHNEAQRQQLASDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGRLILDQMAAAL
AKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSILPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRVGQ

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=101, Percent_Identity=42.5742574257426, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33219; Mature: 33219

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTIHVRRARFSVAFSPAVAALLAAGLFASGAAFAQNTGATVTPVGNGTVATTALSANT
CCCEEEEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEEEEEECCC
GAAPGTASGAVVHGTAGTANTLTPPPATATPGQVVVGGKVPDEATKAAVLQKLRDTYGAT
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
NVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLA
CHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHHHH
SDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGRLILDQMAAAL
HHHHHHCCCCEEECCCEEECCCCCCHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHHHH
AKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSILPQQMTTTGVGPDQPIA
HHHCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHCEEEEHHHCCHHHHHCCCCCCCCCC
PNDTADGRARNRRIEFRVGQ
CCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MHRTIHVRRARFSVAFSPAVAALLAAGLFASGAAFAQNTGATVTPVGNGTVATTALSANT
CCCEEEEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCEEEEEEEECCC
GAAPGTASGAVVHGTAGTANTLTPPPATATPGQVVVGGKVPDEATKAAVLQKLRDTYGAT
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
NVVDQIEVGDVATPPNWSANVQKLLGAQLKQISKGQLKINGTQIEMKGEVHNEAQRQQLA
CHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHHHH
SDMANTLNPTYTIKNGLRVSASEQGVLDQTLANRTIEFETGSATLTPQGRLILDQMAAAL
HHHHHHCCCCEEECCCEEECCCCCCHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHHHH
AKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSILPQQMTTTGVGPDQPIA
HHHCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHCEEEEHHHCCHHHHHCCCCCCCCCC
PNDTADGRARNRRIEFRVGQ
CCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]