| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78065046
Identifier: 78065046
GI number: 78065046
Start: 439808
End: 440638
Strand: Direct
Name: 78065046
Synonym: Bcep18194_A3570
Alternate gene names: NA
Gene position: 439808-440638 (Clockwise)
Preceding gene: 78065045
Following gene: 78065047
Centisome position: 11.91
GC content: 49.94
Gene sequence:
>831_bases ATGCCGGGAGAATTCGTGGCAAATGTTTCCGCTCGGGGCGATGCCGTGAAACCTGTTTTGATACAAAGTCCTGGCGATAC GAAGCAAGGCGACAGAACTCGAATTGACGACCATCCGTTAGCTGCCAAGATCGGATTGGTTGTTGGATTTATCCCGATAA TCATATATTGGCATGCGTTCAGCGGTTTTTGGTCATCAGGGCTGCCCTGGGTCATTGCGTTGGTGCTGGAGATCGGGTGT CCGCTGTTTTTGTATGTGCATTACTTTCTGAATAGACGATCCAGGCGATTGATTTGGGAGGGGATTGCAGTCTGTGTCGG GTTTGTCCCGACGTGGATGCTGCTCGGATCATATTGGCTGTTTTATTTTTGTTTTGCACCGATGTCAGTTGCAATACGCG CGATCGCGCTTTTGATGTGCCTGACGGTGGCGGCAACTTGGGCCTGGCTCTCGTGGGCTGCTTTTGCTCGGGAAAATGAT CGGCTTGGATTGCTTGAGCGGCTTTTCAAGGATGAAGACGATCGTATTGTGTATCCTGATGAGTCTGATTCCGTTATTGG AAAGCTGGACGGGCCAGGAAAATCGATCGCGGTCCCATATTGGCTGGTCTCGGTGGTTGGTCCGATTCTTATCGGATATT CGATGTTGTCAGCCCGGCAGTTTGAAGGGAGTGGTGGGCCGCACGGAATGTTTATTATCCTGTCGGCGATCGGACTTCCT GTTACTTGCTGGCTCCTGACAAAATTCTTTGTGCGATTTGCTTATTTTCATATTTATCTCTCAATCAAGCTGGAGCGCAA AACAGGGAAGAGGGTCATTCTCGGTTCATGA
Upstream 100 bases:
>100_bases GCCGCTCAAACTGGAGCGTCTCCACGGGAAGTCGGTCATCCTGGTGGACGAATGAGGGGGCGGGGTACGGCACGTCAGCG GCGTTGCCGGATACCCCGCA
Downstream 100 bases:
>100_bases GTGCGGATCGCCTGAAGCCGAGGTTTGTCAGTTTTTTGAGCCGTAAATAATGACAATTGATCTTGATGATGCTTCGCCGA TAGATTTTCACGGAAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPGEFVANVSARGDAVKPVLIQSPGDTKQGDRTRIDDHPLAAKIGLVVGFIPIIIYWHAFSGFWSSGLPWVIALVLEIGC PLFLYVHYFLNRRSRRLIWEGIAVCVGFVPTWMLLGSYWLFYFCFAPMSVAIRAIALLMCLTVAATWAWLSWAAFAREND RLGLLERLFKDEDDRIVYPDESDSVIGKLDGPGKSIAVPYWLVSVVGPILIGYSMLSARQFEGSGGPHGMFIILSAIGLP VTCWLLTKFFVRFAYFHIYLSIKLERKTGKRVILGS
Sequences:
>Translated_276_residues MPGEFVANVSARGDAVKPVLIQSPGDTKQGDRTRIDDHPLAAKIGLVVGFIPIIIYWHAFSGFWSSGLPWVIALVLEIGC PLFLYVHYFLNRRSRRLIWEGIAVCVGFVPTWMLLGSYWLFYFCFAPMSVAIRAIALLMCLTVAATWAWLSWAAFAREND RLGLLERLFKDEDDRIVYPDESDSVIGKLDGPGKSIAVPYWLVSVVGPILIGYSMLSARQFEGSGGPHGMFIILSAIGLP VTCWLLTKFFVRFAYFHIYLSIKLERKTGKRVILGS >Mature_275_residues PGEFVANVSARGDAVKPVLIQSPGDTKQGDRTRIDDHPLAAKIGLVVGFIPIIIYWHAFSGFWSSGLPWVIALVLEIGCP LFLYVHYFLNRRSRRLIWEGIAVCVGFVPTWMLLGSYWLFYFCFAPMSVAIRAIALLMCLTVAATWAWLSWAAFARENDR LGLLERLFKDEDDRIVYPDESDSVIGKLDGPGKSIAVPYWLVSVVGPILIGYSMLSARQFEGSGGPHGMFIILSAIGLPV TCWLLTKFFVRFAYFHIYLSIKLERKTGKRVILGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30914; Mature: 30783
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGEFVANVSARGDAVKPVLIQSPGDTKQGDRTRIDDHPLAAKIGLVVGFIPIIIYWHAF CCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SGFWSSGLPWVIALVLEIGCPLFLYVHYFLNRRSRRLIWEGIAVCVGFVPTWMLLGSYWL HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FYFCFAPMSVAIRAIALLMCLTVAATWAWLSWAAFARENDRLGLLERLFKDEDDRIVYPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCC ESDSVIGKLDGPGKSIAVPYWLVSVVGPILIGYSMLSARQFEGSGGPHGMFIILSAIGLP CCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH VTCWLLTKFFVRFAYFHIYLSIKLERKTGKRVILGS HHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCC >Mature Secondary Structure PGEFVANVSARGDAVKPVLIQSPGDTKQGDRTRIDDHPLAAKIGLVVGFIPIIIYWHAF CCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SGFWSSGLPWVIALVLEIGCPLFLYVHYFLNRRSRRLIWEGIAVCVGFVPTWMLLGSYWL HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FYFCFAPMSVAIRAIALLMCLTVAATWAWLSWAAFARENDRLGLLERLFKDEDDRIVYPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCC ESDSVIGKLDGPGKSIAVPYWLVSVVGPILIGYSMLSARQFEGSGGPHGMFIILSAIGLP CCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH VTCWLLTKFFVRFAYFHIYLSIKLERKTGKRVILGS HHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA