Click here to switch to the map view.

The map label for this gene is 78065038

Identifier: 78065038

GI number: 78065038

Start: 427490

End: 427975

Strand: Direct

Name: 78065038

Synonym: Bcep18194_A3562

Alternate gene names: NA

Gene position: 427490-427975 (Clockwise)

Preceding gene: 78065037

Following gene: 78065039

Centisome position: 11.57

GC content: 62.76

Gene sequence:

>486_bases
ATGAAACGATTCGAACCCAGTTTTCTCGACAAGCTGTTCGACGACGAACCGCACCTGCCGGCCTCGGCAGCGATGCGGCA
ATTGTCGCTGGACGAGCTCAAGAACACGGTCGCCCGCGACGTCGAGGCGATTCTCAACACCCGTATCGCCCACACCGAGA
ACGAACTGGCCGCGCTGCCGGAGTGCCAGAAGTCGGTGCTGACCTACGGGCTGAACGATTTTGCGGGGCTGAGCCTGGCG
AGTCACTATGACCGCGCGTTCATCTGCAAGTCGATCCAGCAGGCCATCGCACGGCACGAGCCGCGCCTGCAGCAGGTGCA
GGTGACGTTCGAGCTGAACGAGCAGGCCACCAACGCGCTTTACTTCGCGATTCAGGCGCTGCTCGTCGTGCACCCGGCCG
AAGAGCCGGTGAGTTTCGACGCGATGCTGCAGCCCTCGACGCTGCAGTATTCGGTCACGCGCGCACGCGCCGCAAGAATG
CAGTAA

Upstream 100 bases:

>100_bases
GAGTCTGACGAAGAACGACAAGACCTACGCGGTCTAAAGTCGGTTGCGGCAACGGGGCGCGTGGCGTCCCCGTTGCCGTT
TTCGCTGTGAATCCCGGCCG

Downstream 100 bases:

>100_bases
ATCATGCCGCCGAGCGGGCCGGACCGCCCGGTGGTGGATCAGGGTCCGGCAGGAAATATTGAGGTTCGGGGTCGTCGATG
GAAGAATTGCTGCCGTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Secretion System Protein; Type VI Secretion System Lysozyme-Related Family

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKRFEPSFLDKLFDDEPHLPASAAMRQLSLDELKNTVARDVEAILNTRIAHTENELAALPECQKSVLTYGLNDFAGLSLA
SHYDRAFICKSIQQAIARHEPRLQQVQVTFELNEQATNALYFAIQALLVVHPAEEPVSFDAMLQPSTLQYSVTRARAARM
Q

Sequences:

>Translated_161_residues
MKRFEPSFLDKLFDDEPHLPASAAMRQLSLDELKNTVARDVEAILNTRIAHTENELAALPECQKSVLTYGLNDFAGLSLA
SHYDRAFICKSIQQAIARHEPRLQQVQVTFELNEQATNALYFAIQALLVVHPAEEPVSFDAMLQPSTLQYSVTRARAARM
Q
>Mature_161_residues
MKRFEPSFLDKLFDDEPHLPASAAMRQLSLDELKNTVARDVEAILNTRIAHTENELAALPECQKSVLTYGLNDFAGLSLA
SHYDRAFICKSIQQAIARHEPRLQQVQVTFELNEQATNALYFAIQALLVVHPAEEPVSFDAMLQPSTLQYSVTRARAARM
Q

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18129; Mature: 18129

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFEPSFLDKLFDDEPHLPASAAMRQLSLDELKNTVARDVEAILNTRIAHTENELAALP
CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCH
ECQKSVLTYGLNDFAGLSLASHYDRAFICKSIQQAIARHEPRLQQVQVTFELNEQATNAL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEECHHHHHHH
YFAIQALLVVHPAEEPVSFDAMLQPSTLQYSVTRARAARMQ
HHHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRFEPSFLDKLFDDEPHLPASAAMRQLSLDELKNTVARDVEAILNTRIAHTENELAALP
CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCH
ECQKSVLTYGLNDFAGLSLASHYDRAFICKSIQQAIARHEPRLQQVQVTFELNEQATNAL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEECHHHHHHH
YFAIQALLVVHPAEEPVSFDAMLQPSTLQYSVTRARAARMQ
HHHHHHHHHHCCCCCCCCCHHEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA