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The map label for this gene is 78065031

Identifier: 78065031

GI number: 78065031

Start: 420931

End: 421713

Strand: Reverse

Name: 78065031

Synonym: Bcep18194_A3555

Alternate gene names: NA

Gene position: 421713-420931 (Counterclockwise)

Preceding gene: 78065032

Following gene: 78065025

Centisome position: 11.42

GC content: 63.98

Gene sequence:

>783_bases
ATGAGCTACGCGCCTTCCCTGTTCGGCGACAACGCGCCGGCACCGCTGCATACGCCCGCGTCGACCGACGCCTCGTTCCA
GGCCCGTTCGCTGCTCGACCTGCTGTACGACGGGTTCTTCATGCTGTTCCTGCTTAAGAACGGGCGGGAACCGGAGAGCG
CGGGCGAATTCAGCACGCGGATCCAGGAATTCCTGTCGGATTTCGAGCGCGGTGCGAAGAAGCTGAATATCGCGGCTGAA
GACGTGTACGGCGCGAAGTTCGCGTTCTGCGCGGCGATCGACGAGATGGTGCTGTCGTCGCAGTTCAAGATCCGCACGGA
CTGGGAACGCCGGCCGCTGCAGCTCGTGCTGTTCGGCGAGCAGCTCGCGGGCGAGAAGTTCTTCCAGTATCTCGAGGAAT
GTCGCGCGCAGGGCGCGGCGCGGCTGCAGTCGCTCGAGGTGTTTCACATGTGCCTGCTGCTCGGGTTCCAGGGGAAGTAT
CTGCTGGAAGGGCCGGAGAAGCTGGCTTACCTCACCGCGCGGCTGGGGGACGAGATCGCGCACATGAAGGGCAAGCGGGC
GCCGTTCGCGCCCCATTGGCCGCTGCCGGATCAGATCGCGCATCGGTTGAAGCGTGAGGTGCCGGTGTGGGCGATTGGGG
CGGTGTTCGCGCTCGTGGCGCTGCTCGGGTATCTCGGGCTCAACACGTACCTGAAGGACAAGACGCTGCAGGCGTTGGCG
CCTTATTCGCAGGTGATCAAGGTCGGGCCGGAGTCGGCTAATTTGACGATTTCGTTGCCTTGA

Upstream 100 bases:

>100_bases
GTGGTGCGCTGTACGAGCGCATGCTGCAGGCCCAGTCCGCGATGATCTACGCGCCGACTGGCATCAATGACCTGAAATTC
GAACTGATCGCGGTCACATC

Downstream 100 bases:

>100_bases
GGGGTGAGCTTCGTACCGCCGCTGATGCTTCATGAAAAAAGGACCGCTTGGCGGTCCTTTTTTGTTTGTGGCGTGCTCGC
TGCGTGACGTCAGAACAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Family Protein; Outer Membrane Protein; Type VI Secretion System Core Protein; Type IV/VI Secretion System Protein; OmpA/MotB Domain-Containing Protein; Secretion System Protein; DotU Family Type IV / VI Secretion System Protein; Transmembrane Protein; OmpA/MotB Domain Protein; Type VI Secretion System Protein ImpK; OmpA-Family Protein; OmpA/MotB; Type IV / VI Secretion System Transmembrane Protein; Type IV / VI Secretion System Family Protein DotU; Outer Membrane Protein Ompa/Motb Family

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSYAPSLFGDNAPAPLHTPASTDASFQARSLLDLLYDGFFMLFLLKNGREPESAGEFSTRIQEFLSDFERGAKKLNIAAE
DVYGAKFAFCAAIDEMVLSSQFKIRTDWERRPLQLVLFGEQLAGEKFFQYLEECRAQGAARLQSLEVFHMCLLLGFQGKY
LLEGPEKLAYLTARLGDEIAHMKGKRAPFAPHWPLPDQIAHRLKREVPVWAIGAVFALVALLGYLGLNTYLKDKTLQALA
PYSQVIKVGPESANLTISLP

Sequences:

>Translated_260_residues
MSYAPSLFGDNAPAPLHTPASTDASFQARSLLDLLYDGFFMLFLLKNGREPESAGEFSTRIQEFLSDFERGAKKLNIAAE
DVYGAKFAFCAAIDEMVLSSQFKIRTDWERRPLQLVLFGEQLAGEKFFQYLEECRAQGAARLQSLEVFHMCLLLGFQGKY
LLEGPEKLAYLTARLGDEIAHMKGKRAPFAPHWPLPDQIAHRLKREVPVWAIGAVFALVALLGYLGLNTYLKDKTLQALA
PYSQVIKVGPESANLTISLP
>Mature_259_residues
SYAPSLFGDNAPAPLHTPASTDASFQARSLLDLLYDGFFMLFLLKNGREPESAGEFSTRIQEFLSDFERGAKKLNIAAED
VYGAKFAFCAAIDEMVLSSQFKIRTDWERRPLQLVLFGEQLAGEKFFQYLEECRAQGAARLQSLEVFHMCLLLGFQGKYL
LEGPEKLAYLTARLGDEIAHMKGKRAPFAPHWPLPDQIAHRLKREVPVWAIGAVFALVALLGYLGLNTYLKDKTLQALAP
YSQVIKVGPESANLTISLP

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29007; Mature: 28876

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAPSLFGDNAPAPLHTPASTDASFQARSLLDLLYDGFFMLFLLKNGREPESAGEFSTR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IQEFLSDFERGAKKLNIAAEDVYGAKFAFCAAIDEMVLSSQFKIRTDWERRPLQLVLFGE
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECH
QLAGEKFFQYLEECRAQGAARLQSLEVFHMCLLLGFQGKYLLEGPEKLAYLTARLGDEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH
HMKGKRAPFAPHWPLPDQIAHRLKREVPVWAIGAVFALVALLGYLGLNTYLKDKTLQALA
HHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYSQVIKVGPESANLTISLP
HHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure 
SYAPSLFGDNAPAPLHTPASTDASFQARSLLDLLYDGFFMLFLLKNGREPESAGEFSTR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IQEFLSDFERGAKKLNIAAEDVYGAKFAFCAAIDEMVLSSQFKIRTDWERRPLQLVLFGE
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECH
QLAGEKFFQYLEECRAQGAARLQSLEVFHMCLLLGFQGKYLLEGPEKLAYLTARLGDEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH
HMKGKRAPFAPHWPLPDQIAHRLKREVPVWAIGAVFALVALLGYLGLNTYLKDKTLQALA
HHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYSQVIKVGPESANLTISLP
HHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA