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The map label for this gene is sspB [H]

Identifier: 78065020

GI number: 78065020

Start: 405166

End: 405693

Strand: Direct

Name: sspB [H]

Synonym: Bcep18194_A3543

Alternate gene names: 78065020

Gene position: 405166-405693 (Clockwise)

Preceding gene: 78065019

Following gene: 78065022

Centisome position: 10.97

GC content: 62.88

Gene sequence:

>528_bases
ATGCAAGAGATTTCAACGAAGCCTTATCTGCTGCGCGCGCTGTACGAGTGGTGCACCGATAACGGTTACACGCCGCATAT
CGCGGTGAGGGTCGATAACTCGACGCGCGTGCCGCGTCAGTTCGTGCGTGACGGCGAGATCGTGCTCAACATCAGCTTCG
AGGCGACCAGCCAGTTGCAGATGGGCAACGAGTGGATCGAGTTCACGGCCCGGTTCTCCGGGAAGGCGCACAAGATCGAG
ATTCCGGTTGCCAACGTGCTCGCGATCTATGCGCGCGAGAACGGGCAGGGCATGGCGTTCCAGGTCGATGCGGTCGCGGG
CGAAGGTGCGGATTCGGGTGCGTTCGACGAAGATGCGGCGCAGACGGATGATGCGCCGCGCGACGAATCGCCTGTTGCGT
TGACGCCGGTGGCCGACAGCGGCGCGAACGAGGAGCCCTCCGAAGGCGCCGACGAGCCGCCGAAAACCGACGGCGATGGC
GACGGTTCAAAAGGTGGCAGCAGACCTCGCCTCAAGATCGTGAAATGA

Upstream 100 bases:

>100_bases
CGCCGTCCGAAAAGGTCATGCGTCGTTGATGGTGCAATGAGTGCATGACGGAGAGGGCGGCGCGGCGTGCCGCGCCCCCG
CTCCGGGTTCGAGGATTGTG

Downstream 100 bases:

>100_bases
GGTAGAATCTCGCGCTACGCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCGGGTTCGAGTCC
TGCAGCCGGCACCATATCTG

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
IPVANVLAIYARENGQGMAFQVDAVAGEGADSGAFDEDAAQTDDAPRDESPVALTPVADSGANEEPSEGADEPPKTDGDG
DGSKGGSRPRLKIVK

Sequences:

>Translated_175_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
IPVANVLAIYARENGQGMAFQVDAVAGEGADSGAFDEDAAQTDDAPRDESPVALTPVADSGANEEPSEGADEPPKTDGDG
DGSKGGSRPRLKIVK
>Mature_175_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
IPVANVLAIYARENGQGMAFQVDAVAGEGADSGAFDEDAAQTDDAPRDESPVALTPVADSGANEEPSEGADEPPKTDGDG
DGSKGGSRPRLKIVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=119, Percent_Identity=45.3781512605042, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 18899; Mature: 18899

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKIEIPVANVLAIYARENGQGMAFQVDAVAGEGADSGAFDEDAA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
QTDDAPRDESPVALTPVADSGANEEPSEGADEPPKTDGDGDGSKGGSRPRLKIVK
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKIEIPVANVLAIYARENGQGMAFQVDAVAGEGADSGAFDEDAA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
QTDDAPRDESPVALTPVADSGANEEPSEGADEPPKTDGDGDGSKGGSRPRLKIVK
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]