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The map label for this gene is ugpB [H]

Identifier: 78064969

GI number: 78064969

Start: 355761

End: 357095

Strand: Direct

Name: ugpB [H]

Synonym: Bcep18194_A3492

Alternate gene names: 78064969

Gene position: 355761-357095 (Clockwise)

Preceding gene: 78064968

Following gene: 78064970

Centisome position: 9.63

GC content: 66.07

Gene sequence:

>1335_bases
ATGAAGAAGAAGCCTGCGGGGACACTGGTTCGTTCGATCGCGCTCGGCGGCGCGCTGATGTTCGGGGTGCAGCACGTGGC
GCTCGCCGCGACGGAAATCCAGTTCTGGCATGCGATGGAAGCCGCGCTCGGCGAGCGGGTCAACGCGATCGCCGACCAGT
TCAATGCGTCGCAGAGCGACTACAAGATCGTGCCGGTCTTCAAGGGCACCTACGACCAGGCGCTCGCGGCCGGCATCGCC
GCCTATCGCAGCGGCAACGCGCCGGCGATCCTCCAGGTCTATGAAGTCGGCACGGCCACGATGATGCAGGCGAAGAAGGC
CGTCGTGCCCGTCTACGACGTGTTCAAGCAGGCCGGCGTGCCGCTCGACGAGAAGGCGTTCGTGCCCACCATCGCGAGCT
ACTACAGCGACGCGAAGACGGGCCATCTCGTATCGATGCCGTTCAACAGCTCGACGCCGGTGCTGTACTACAACAAGGAC
GCGTTCAAGAAGGCCGGCATCGATCCGAACCAGCCGCCGAAGACGTGGGCCGATGTGCAGGCCGATGCCGAGAAGCTGCG
CAAGTCGGGGATGGCATGCGGCTTCACGACCGGCTGGCAGGGCTGGATCCAGCTCGAGAACTACAGCGCGTGGCACGCGC
TGCCGTTCGCGAGCCGCAACAACGGCTTCGACGGCGCCGACGCCGTGCTGGAGTTCAACAAGCCGCAGCAGATCGCGCAC
ATCTCGTTCCTGCAGCAGATGGCGAAGGACGGCACGTTCACGTACGCGGGCCGCAAGGATGAAGCGTCGGCGAAGTTCTA
CAGCGGCGACTGCGGGATCATGACGACGTCGTCGGGCGCGCTCGCGAACGTGCAGAAGTTCGCGAAGTTCAGCTACGGCA
CCGGCATGATGCCGTACGACGCGAACGTGAAGGGCGCTCCGCAGAACGCGATCATCGGCGGCGCGAGCCTGTGGGTGCTG
GCGGGCAAGGATCCGGCGACCTACAAGGGCGTCGCGAAATTCCTCGCGTACCTGGCCTCGCCGGCCGTCGCCGCGAAGTG
GCACCAGGACACGGGCTACCTGCCCGTGACGACCGCCGCGTACGACCTCACGCGCCAGCAGGGCTTCTACGCGAAGAACC
CGAGCGCCGAAACCGCGATCAAGCAGATGCTGAACAAGCCGCCGCTGCCGTACACGAAGGGGCTGCGCCTGGGCAACATG
CCGCAGATCCGCACGGTGGTCGACGAGGAGTTCGAGCAGGTCTGGGCGCAGAAGAAGTCGCCGAAGGACGCGCTCGATTC
GGCTGCGTCGCGCGGCGACGAGCTGCTGCGCCGCTTCGAGAAGTCGGGCGGCTGA

Upstream 100 bases:

>100_bases
CGACAACTGACTGTCACAAACGATCACTAGACTTCGCCGGTTCAATGGCGATGGGAATGTTGCACACGCTGTTGGTAACG
TTTTCATAGGAGAGAGGTCG

Downstream 100 bases:

>100_bases
GCCCGCATCGCATCGTGCCGCCGGCCGCGTCGCATCCTGTACGGATGCACGCGCCGGCTGGCGGCACGGCCACCTTTCCG
TTGCGCCTGACCGGATATCC

Product: glycerol-3-phosphate transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKKKPAGTLVRSIALGGALMFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDYKIVPVFKGTYDQALAAGIA
AYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVPLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKD
AFKKAGIDPNQPPKTWADVQADAEKLRKSGMACGFTTGWQGWIQLENYSAWHALPFASRNNGFDGADAVLEFNKPQQIAH
ISFLQQMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYDANVKGAPQNAIIGGASLWVL
AGKDPATYKGVAKFLAYLASPAVAAKWHQDTGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNM
PQIRTVVDEEFEQVWAQKKSPKDALDSAASRGDELLRRFEKSGG

Sequences:

>Translated_444_residues
MKKKPAGTLVRSIALGGALMFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDYKIVPVFKGTYDQALAAGIA
AYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVPLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKD
AFKKAGIDPNQPPKTWADVQADAEKLRKSGMACGFTTGWQGWIQLENYSAWHALPFASRNNGFDGADAVLEFNKPQQIAH
ISFLQQMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYDANVKGAPQNAIIGGASLWVL
AGKDPATYKGVAKFLAYLASPAVAAKWHQDTGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNM
PQIRTVVDEEFEQVWAQKKSPKDALDSAASRGDELLRRFEKSGG
>Mature_444_residues
MKKKPAGTLVRSIALGGALMFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDYKIVPVFKGTYDQALAAGIA
AYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVPLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKD
AFKKAGIDPNQPPKTWADVQADAEKLRKSGMACGFTTGWQGWIQLENYSAWHALPFASRNNGFDGADAVLEFNKPQQIAH
ISFLQQMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYDANVKGAPQNAIIGGASLWVL
AGKDPATYKGVAKFLAYLASPAVAAKWHQDTGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNM
PQIRTVVDEEFEQVWAQKKSPKDALDSAASRGDELLRRFEKSGG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=416, Percent_Identity=69.9519230769231, Blast_Score=640, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48075; Mature: 48075

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKPAGTLVRSIALGGALMFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKIVPVFKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGV
EEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHCCC
PLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDAFKKAGIDPNQPPKTWADVQ
CCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHH
ADAEKLRKSGMACGFTTGWQGWIQLENYSAWHALPFASRNNGFDGADAVLEFNKPQQIAH
HHHHHHHHCCCEECCCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHEEECCCCHHHHH
ISFLQQMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYD
HHHHHHHHHCCCEEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCC
ANVKGAPQNAIIGGASLWVLAGKDPATYKGVAKFLAYLASPAVAAKWHQDTGYLPVTTAA
CCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEECCCCCCEEEEHHH
YDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMPQIRTVVDEEFEQVWAQKKS
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PKDALDSAASRGDELLRRFEKSGG
CHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKPAGTLVRSIALGGALMFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKIVPVFKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGV
EEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHCCC
PLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDAFKKAGIDPNQPPKTWADVQ
CCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHH
ADAEKLRKSGMACGFTTGWQGWIQLENYSAWHALPFASRNNGFDGADAVLEFNKPQQIAH
HHHHHHHHCCCEECCCCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHEEECCCCHHHHH
ISFLQQMAKDGTFTYAGRKDEASAKFYSGDCGIMTTSSGALANVQKFAKFSYGTGMMPYD
HHHHHHHHHCCCEEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCC
ANVKGAPQNAIIGGASLWVLAGKDPATYKGVAKFLAYLASPAVAAKWHQDTGYLPVTTAA
CCCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEECCCCCCEEEEHHH
YDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMPQIRTVVDEEFEQVWAQKKS
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PKDALDSAASRGDELLRRFEKSGG
CHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA