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The map label for this gene is yraN [C]

Identifier: 78064868

GI number: 78064868

Start: 250423

End: 250809

Strand: Direct

Name: yraN [C]

Synonym: Bcep18194_A3391

Alternate gene names: 78064868

Gene position: 250423-250809 (Clockwise)

Preceding gene: 78064866

Following gene: 78064869

Centisome position: 6.78

GC content: 74.16

Gene sequence:

>387_bases
TTGCCGCGTGCGGGCGACAACTTTTCCGGTGCGGCGCGATCCAAACCGGTCGGCGCGGCGTTCGAGCAGCGTGCGCGGCA
GTTTCTCGAGCGCCGCGGCCTTGTGTTCGTCGCGGCGAACGTGACGATGCGCGGCGGCGAGCTCGATCTCGTGATGCGCG
AGCCCGACGGCATGCTCGTGTTCGTCGAGGTGCGCGCGCGGCGCAGCGCCCGGCATGGCGGCGCGGCCGCGAGCGTGGGC
TGGCGCAAGCGGCGGCGCCTGGTGGCGGCCGCGCTGCAGTTCTGGGCGCGGCACGGCGCCGGTGCCGCGTGCCGCTTCGA
CGTCGTCGCGTTCGAGGCCGGGCAGCTCGCGTGGCTGCGCGACGCATTTCGTGCCGACGATGCGTAG

Upstream 100 bases:

>100_bases
GAGGGCAGTCATGGCAGGCAATGCGCGCAATCGCGGCGCAAGCGGAACAAGGACGGCATTGTGCCACGCGGCGCCGGCCC
GGCCGGGCGACGGGCGCGGT

Downstream 100 bases:

>100_bases
CCGCGAGCTGTGACGAGATGTAAAGAGTTCGTGCCGGACCCCCGGAGAGGGTGCCGGAGTACGGTAAACTCGCCGCACCC
ACGATGTCGCGCGATGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPRAGDNFSGAARSKPVGAAFEQRARQFLERRGLVFVAANVTMRGGELDLVMREPDGMLVFVEVRARRSARHGGAAASVG
WRKRRRLVAAALQFWARHGAGAACRFDVVAFEAGQLAWLRDAFRADDA

Sequences:

>Translated_128_residues
MPRAGDNFSGAARSKPVGAAFEQRARQFLERRGLVFVAANVTMRGGELDLVMREPDGMLVFVEVRARRSARHGGAAASVG
WRKRRRLVAAALQFWARHGAGAACRFDVVAFEAGQLAWLRDAFRADDA
>Mature_127_residues
PRAGDNFSGAARSKPVGAAFEQRARQFLERRGLVFVAANVTMRGGELDLVMREPDGMLVFVEVRARRSARHGGAAASVGW
RKRRRLVAAALQFWARHGAGAACRFDVVAFEAGQLAWLRDAFRADDA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=121, Percent_Identity=50.4132231404959, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14043; Mature: 13912

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAGDNFSGAARSKPVGAAFEQRARQFLERRGLVFVAANVTMRGGELDLVMREPDGMLV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECEEEECCCEEEEEECCCCEEE
FVEVRARRSARHGGAAASVGWRKRRRLVAAALQFWARHGAGAACRFDVVAFEAGQLAWLR
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHH
DAFRADDA
HHHCCCCC
>Mature Secondary Structure 
PRAGDNFSGAARSKPVGAAFEQRARQFLERRGLVFVAANVTMRGGELDLVMREPDGMLV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECEEEECCCEEEEEECCCCEEE
FVEVRARRSARHGGAAASVGWRKRRRLVAAALQFWARHGAGAACRFDVVAFEAGQLAWLR
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHH
DAFRADDA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA