| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is livK [C]
Identifier: 78064858
GI number: 78064858
Start: 240778
End: 241920
Strand: Direct
Name: livK [C]
Synonym: Bcep18194_A3381
Alternate gene names: 78064858
Gene position: 240778-241920 (Clockwise)
Preceding gene: 78064857
Following gene: 78064860
Centisome position: 6.52
GC content: 63.78
Gene sequence:
>1143_bases ATGAATATCAAGATGCAAAAGCTGTTGCCGATCACCGCCGCGGCGATGCTGTGCGTTGCAGCTGCAAGCAACGCGGCCGC CGATCAAGTCGTCAAGATCGGCCACGTCGCGCCCTTGACGGGCGGCATTGCACACCTGGGCAAGGACAACGAAAACGGTG CGCGTCTCGCAGTCGAGGAGATCAACGCCAAGGGTCTCACGATCGGCGGCCAGAAAATCACGCTGCAACTCGACCCGCAG GATGACGCGGCCGACCCGCGGCAGGCCACGCAGGTTGCGCAGAAGCTCGTCGACGACAAGGTCGTCGCGGTGGTCGGCCA CCTGAACTCGGGCACGTCGATCCCGGCCTCGAAGATCTACAGCGATGCGGGCATCGTGCAGATCTCGCCGTCGGCCACCA ACCCGGCCTACACGCAGCAGGGCTTCAAGACCACGTACCGCGTGGTGGCCACCGATGCGCAGCAGGGCCCGGCACTCGCG AACTACGCGCACTCGAAGGGCATCAAGAGCGTGGCCGTGGTCGACGATTCGACCGCGTACGGCCAGGGTCTCGCGAACGA GTTCGAGAAGAAGGCCAAGGCGCTCGGCCTGAAGGTGATGTCGCATGACGCGACGAACGACAAGGCGGTCGACTTCCGCG CGATTCTGACCAAGATCAAGGGCGAGAATCCGGACGCGATCATGTACGGCGGCATGGACGCCACCGGCGGCCCGTTCGCG AAGCAGGCGAAGCAGCTCGGCCTGCGCGCGAAGATCTTCGCGGGCGACGGCGTGTGCACGGAAAAGCTGGCCGACCTGGC CGGCGACGCGACCGACAACGTGGTGTGCTCGGAAGCCGGTGCTTCGCTCGAGAAGATGTCGGGCGGCGCGGCGTTCAAGG CGAAGTACGAGAAGCGCTTTGGCCAGCCGATCCAGATCTACGCACCGTTCACGTATGACGCCGTGTACATCATCGTCGAT GCGATGAAGCGCGCGAACTCGACGGATCCGGCGAAGATCCTCGCCGCGATGCCGACGACGAACTACTCGGGCGTGATCGG CACGACGACCTTCGACTCGAAGGGCGACCTGCAGCACGGCGTGATCTCGCTGTACAACTACAAGAACGGCAAGAAGTCGC TGCTCGACGAAGTGAAGATGTAA
Upstream 100 bases:
>100_bases TGAACGATGCAACCGGCGAATCGTCCAGTGATTGCAAACACAGGGATGGCAGCGGGGCACCGGGCGATGGCGTTTATTGG GACCGAAACTGGAGACTTAT
Downstream 100 bases:
>100_bases CCAGAAAAGCGGTCAACAGAAGGGGTGAAAGCGCGCATGCGGTAACGCAGGCGCGCTTTCTTTTTGGGCCGGCGCCTGCC GCGCCCCGTCAGATCTTCAG
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNIKMQKLLPITAAAMLCVAAASNAAADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEEINAKGLTIGGQKITLQLDPQ DDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVVATDAQQGPALA NYAHSKGIKSVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMYGGMDATGGPFA KQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNVVCSEAGASLEKMSGGAAFKAKYEKRFGQPIQIYAPFTYDAVYIIVD AMKRANSTDPAKILAAMPTTNYSGVIGTTTFDSKGDLQHGVISLYNYKNGKKSLLDEVKM
Sequences:
>Translated_380_residues MNIKMQKLLPITAAAMLCVAAASNAAADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEEINAKGLTIGGQKITLQLDPQ DDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVVATDAQQGPALA NYAHSKGIKSVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMYGGMDATGGPFA KQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNVVCSEAGASLEKMSGGAAFKAKYEKRFGQPIQIYAPFTYDAVYIIVD AMKRANSTDPAKILAAMPTTNYSGVIGTTTFDSKGDLQHGVISLYNYKNGKKSLLDEVKM >Mature_380_residues MNIKMQKLLPITAAAMLCVAAASNAAADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEEINAKGLTIGGQKITLQLDPQ DDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIYSDAGIVQISPSATNPAYTQQGFKTTYRVVATDAQQGPALA NYAHSKGIKSVAVVDDSTAYGQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMYGGMDATGGPFA KQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNVVCSEAGASLEKMSGGAAFKAKYEKRFGQPIQIYAPFTYDAVYIIVD AMKRANSTDPAKILAAMPTTNYSGVIGTTTFDSKGDLQHGVISLYNYKNGKKSLLDEVKM
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=356, Percent_Identity=33.7078651685393, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI48994941, Length=369, Percent_Identity=31.9783197831978, Blast_Score=172, Evalue=3e-44,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39858; Mature: 39858
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKMQKLLPITAAAMLCVAAASNAAADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEE CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEE INAKGLTIGGQKITLQLDPQDDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIY CCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH SDAGIVQISPSATNPAYTQQGFKTTYRVVATDAQQGPALANYAHSKGIKSVAVVDDSTAY CCCCEEEECCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHH GQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMYGGMDATGGPFA CCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH KQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNVVCSEAGASLEKMSGGAAFKAKYEKRF HHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCEEEHHHHHC GQPIQIYAPFTYDAVYIIVDAMKRANSTDPAKILAAMPTTNYSGVIGTTTFDSKGDLQHG CCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEECCCCCCCCCCCC VISLYNYKNGKKSLLDEVKM EEEEEECCCCHHHHHHHHCC >Mature Secondary Structure MNIKMQKLLPITAAAMLCVAAASNAAADQVVKIGHVAPLTGGIAHLGKDNENGARLAVEE CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEE INAKGLTIGGQKITLQLDPQDDAADPRQATQVAQKLVDDKVVAVVGHLNSGTSIPASKIY CCCCCEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH SDAGIVQISPSATNPAYTQQGFKTTYRVVATDAQQGPALANYAHSKGIKSVAVVDDSTAY CCCCEEEECCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHH GQGLANEFEKKAKALGLKVMSHDATNDKAVDFRAILTKIKGENPDAIMYGGMDATGGPFA CCHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHH KQAKQLGLRAKIFAGDGVCTEKLADLAGDATDNVVCSEAGASLEKMSGGAAFKAKYEKRF HHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCEEEHHHHHC GQPIQIYAPFTYDAVYIIVDAMKRANSTDPAKILAAMPTTNYSGVIGTTTFDSKGDLQHG CCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEECCCCCCCCCCCC VISLYNYKNGKKSLLDEVKM EEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA