Definition Burkholderia sp. 383 chromosome 1, complete genome.
Accession NC_007510
Length 3,694,126

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The map label for this gene is 78064816

Identifier: 78064816

GI number: 78064816

Start: 192531

End: 194729

Strand: Direct

Name: 78064816

Synonym: Bcep18194_A3339

Alternate gene names: NA

Gene position: 192531-194729 (Clockwise)

Preceding gene: 78064815

Following gene: 78064817

Centisome position: 5.21

GC content: 70.44

Gene sequence:

>2199_bases
ATGGACGGAACAGGACAGGCATTGCAGGCGGCGCTCGCGCATCATGAGGCGGGGCGTCTCGCCGAAGCGAAGACGCTGTA
CGACGCGATCCTCACCGCGCAGCCGGGCCAGCCGGATGCGCTGCATTTTCTCGGGCTGCTGGCGTGCCAGCTGAAGCAGT
ACGACGCGGGCATCGCGCTGATGGAGCAATCGCTCGTCGAGCGACCGGACGCGTCGTACTTCAACAACCTGGGCAACATG
CTGCGCGAAAACGGTCGGCTCGACGACGCGATCGCGCACTATCGGCGCGCGGTGGCGCTGCGGCCGGACTATCCGGAGGC
GCACAACAATCTCGGCAACGCGTTGCGCGACGCGCGCGAGCCGGCGGCCGCGATGGAGAGCTGCGCGCGTGCGATCGAGC
TGCGCCCCGGTTACGCGGAGGCGTACAACAACCTTGGCAACGCGCTGCAGGATCTGGGCGACTTTGATCGCGCCGCGTCG
CACTACGGCCGCGCGATCGAGCTGGACCCGTCGATGGCGATGGCCCACGCGAACTTGAGCGCGGTGCGTCACCGGCAGCT
GCGCTGCGCGGAAGCGCTCGCGCATGCGCAGGACGCGATCCGGCTCGCGCCGAACCTCGCCGACGCGCACAACCACGCGG
GCAACGCGTATCACGGACTGGACCGGCTCGATGCGGCGCAGGCCAGCCACCGCACGGCTGTCACGCTGAATCCGGCGGAC
GCCGGCGCGTGCCACAACCTGTCCGTCGTGCTGCTGAAGCTGCAGCGGCTCGACGAGGCGCTCGTGTATTGCCGGCAGGC
GTTGCAGGCCGGCCCGCCGGCCGCGTTGATGCACGTCAATCTCGGCGACATCCTGCGCGCGCAGGGCAACGTCGATGCCG
CGGTCCACGCGTATCGCGATGCGCTTGCGCTGGTGCGCGACGACGCCGACGACGTCGCGGCGACCGTGCTGAACCGGCTG
CTGTTCAGCGCGGCGGCGTCCGCTTGCGTGAACCCCGCCGACTACCTGGCCGACGCGCGGCGCTACGGCCGGCACCTGGC
CGCGCGTTCGACGCGCCATGCGCACGATCCGCGTGAGCGGGCCGCGCGCGCGCAGGGGCGGCCACTGCGTGTCGGCTTCG
TGTCCGGCGACCTGCGCCTGCATCCGGTCGGCATCTTCCTGGAAAGCGTGCTCGCGCACCTCGAGCGCACGCGCATCGAC
CTGCGCGTGTACGTGACCACGGACGAGGAGGACGCGATCACCGCGAAACTGAAGCCGCACGCGAGCGGCTGGCGTTCGAT
CGCCGCGCTGGGTCCGGACGCGGCCGCGCGGATGATTCACGACGACGAAATCGACGTCCTCGTCGACCTCGCCGGCCATA
CGCAGTCGAGCGGGTTGGCCGTTTTTGGCTGGAAACCCGCGCCGGTACAGGCGAGCTGGCTCGGCTTCTTCGCGTCGACC
GGCTGCGACGCGATCGATTACTTCATCGGCGACCGCTACACGCAGCCGGACGCCGAAGCGCATCACTTCGTCGAGAAGCC
GTGGCGGCTGCCGGACAGCTTCCTGTGCTTCACGCCGCCGGCCTGCGACGTCGAGGTCGGGCCGCTGCCGATGGCGGCGC
GCGGCCATCCGACGTTCGGTTGCTTCGGCCAGCTCGTGAAGATCGGCGACGACGTCGTGCGCGCATGGTCGCGCATCCTG
CACGCGCTGCCGGACGCGCGGCTGCTGCTCAAGGCGCACGAACTCGGCCGCGAGGGCGTGCGCGACGCGACCGCCGCGCG
CTTCGCGCGGCATGGCATCGACCCGGACCGGCTGATCCTCGAGGGCGGTTCGCCGCGCGCGGAATACTTTGCCGCGTATA
ACCGCATCGACGTCGCGCTGAGCCCGTTTCCGTACCCGGGCGGCACGACCACCGCCGAAGCGCTGTGGATGGGCGTGCCG
GTGCTCGGGATGAAGGGCGGCCGGTTCGTCACGCACATTTGCGAAAGCGTGCTGCACGCGGCGGGCATGGGCGAATGGGT
CGCTGACGGCGAGGACGCCTACGTCGCGAAGGCGATCGCGGCGGTGCGCGACCGCGAGCCGCTCGCGACGCTGCGCGCCG
GGCTGCGCGCGCAACTGCTCGCGTCGCCGCTGTGCGACGCGCGCCGGTTCGCGGCGCATCTCGAAGCGGCGTTCATCGGC
ATGTGGCAACGCTATACGAACTCGGAACACGAAGCATGA

Upstream 100 bases:

>100_bases
CGCGCGATGGGATGGCGGCGTCGGCCGTGATGATCGGGCACGGCGGCAGGCTGATCGACTTCGGACGCGAACCGCATCCC
TATTGAGCAGAGCAGACGAG

Downstream 100 bases:

>100_bases
ACGATATTCAAGACACGCTGCAGTCCGCGCTGGCGCATCATCAGGCGGGCCGTCTCGCCGAAGCGAAGACGCTGTACGAC
GCGATCCTCACCGCGCAGCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Methyltransferase Type; TPR Repeat Protein; TPR Domain Protein; Glycosyl Transferase Family Protein; SPY Protein; Glycosyltransferase TPR Domain Protein; Sulfotransferase; TPR Repeat; Tetratricopeptide Repeat-Containing Protein; Tpr Repeat-Containing Protein; Tetratricopeptide Repeat Family; Methyltransferase Regulatory Domain; Porphyrin Biosynthesis Protein; Tetratricopeptide Domain Protein; Transferase; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Glycosyl Transferase; Peptidase S1 And S6 Chymotrypsin/Hap; FkbM Family Methyltransferase; O-Linked GLCNAC Transferase; TPR Domain/SEC-C Motif Domain Protein; Glycosyl Transferase TPR Repeat Protein; O-Linked N-Acetylglucosamine TransferaNDLY Family; Glycosyl Transferase; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase

Number of amino acids: Translated: 732; Mature: 732

Protein sequence:

>732_residues
MDGTGQALQAALAHHEAGRLAEAKTLYDAILTAQPGQPDALHFLGLLACQLKQYDAGIALMEQSLVERPDASYFNNLGNM
LRENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDAREPAAAMESCARAIELRPGYAEAYNNLGNALQDLGDFDRAAS
HYGRAIELDPSMAMAHANLSAVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTLNPAD
AGACHNLSVVLLKLQRLDEALVYCRQALQAGPPAALMHVNLGDILRAQGNVDAAVHAYRDALALVRDDADDVAATVLNRL
LFSAAASACVNPADYLADARRYGRHLAARSTRHAHDPRERAARAQGRPLRVGFVSGDLRLHPVGIFLESVLAHLERTRID
LRVYVTTDEEDAITAKLKPHASGWRSIAALGPDAAARMIHDDEIDVLVDLAGHTQSSGLAVFGWKPAPVQASWLGFFAST
GCDAIDYFIGDRYTQPDAEAHHFVEKPWRLPDSFLCFTPPACDVEVGPLPMAARGHPTFGCFGQLVKIGDDVVRAWSRIL
HALPDARLLLKAHELGREGVRDATAARFARHGIDPDRLILEGGSPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVP
VLGMKGGRFVTHICESVLHAAGMGEWVADGEDAYVAKAIAAVRDREPLATLRAGLRAQLLASPLCDARRFAAHLEAAFIG
MWQRYTNSEHEA

Sequences:

>Translated_732_residues
MDGTGQALQAALAHHEAGRLAEAKTLYDAILTAQPGQPDALHFLGLLACQLKQYDAGIALMEQSLVERPDASYFNNLGNM
LRENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDAREPAAAMESCARAIELRPGYAEAYNNLGNALQDLGDFDRAAS
HYGRAIELDPSMAMAHANLSAVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTLNPAD
AGACHNLSVVLLKLQRLDEALVYCRQALQAGPPAALMHVNLGDILRAQGNVDAAVHAYRDALALVRDDADDVAATVLNRL
LFSAAASACVNPADYLADARRYGRHLAARSTRHAHDPRERAARAQGRPLRVGFVSGDLRLHPVGIFLESVLAHLERTRID
LRVYVTTDEEDAITAKLKPHASGWRSIAALGPDAAARMIHDDEIDVLVDLAGHTQSSGLAVFGWKPAPVQASWLGFFAST
GCDAIDYFIGDRYTQPDAEAHHFVEKPWRLPDSFLCFTPPACDVEVGPLPMAARGHPTFGCFGQLVKIGDDVVRAWSRIL
HALPDARLLLKAHELGREGVRDATAARFARHGIDPDRLILEGGSPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVP
VLGMKGGRFVTHICESVLHAAGMGEWVADGEDAYVAKAIAAVRDREPLATLRAGLRAQLLASPLCDARRFAAHLEAAFIG
MWQRYTNSEHEA
>Mature_732_residues
MDGTGQALQAALAHHEAGRLAEAKTLYDAILTAQPGQPDALHFLGLLACQLKQYDAGIALMEQSLVERPDASYFNNLGNM
LRENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDAREPAAAMESCARAIELRPGYAEAYNNLGNALQDLGDFDRAAS
HYGRAIELDPSMAMAHANLSAVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTLNPAD
AGACHNLSVVLLKLQRLDEALVYCRQALQAGPPAALMHVNLGDILRAQGNVDAAVHAYRDALALVRDDADDVAATVLNRL
LFSAAASACVNPADYLADARRYGRHLAARSTRHAHDPRERAARAQGRPLRVGFVSGDLRLHPVGIFLESVLAHLERTRID
LRVYVTTDEEDAITAKLKPHASGWRSIAALGPDAAARMIHDDEIDVLVDLAGHTQSSGLAVFGWKPAPVQASWLGFFAST
GCDAIDYFIGDRYTQPDAEAHHFVEKPWRLPDSFLCFTPPACDVEVGPLPMAARGHPTFGCFGQLVKIGDDVVRAWSRIL
HALPDARLLLKAHELGREGVRDATAARFARHGIDPDRLILEGGSPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVP
VLGMKGGRFVTHICESVLHAAGMGEWVADGEDAYVAKAIAAVRDREPLATLRAGLRAQLLASPLCDARRFAAHLEAAFIG
MWQRYTNSEHEA

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=499, Percent_Identity=29.0581162324649, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI32307148, Length=499, Percent_Identity=29.0581162324649, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI118766330, Length=265, Percent_Identity=30.9433962264151, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI118766328, Length=265, Percent_Identity=30.9433962264151, Blast_Score=97, Evalue=6e-20,
Organism=Homo sapiens, GI301336134, Length=235, Percent_Identity=30.2127659574468, Blast_Score=93, Evalue=1e-18,
Organism=Homo sapiens, GI83415184, Length=235, Percent_Identity=30.2127659574468, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI224809432, Length=218, Percent_Identity=27.0642201834862, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=499, Percent_Identity=27.6553106212425, Blast_Score=187, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI115532690, Length=499, Percent_Identity=27.6553106212425, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI25147174, Length=223, Percent_Identity=28.6995515695067, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647755, Length=504, Percent_Identity=27.3809523809524, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24585827, Length=504, Percent_Identity=27.3809523809524, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24585829, Length=504, Percent_Identity=27.3809523809524, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24647123, Length=250, Percent_Identity=29.6, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI161076610, Length=265, Percent_Identity=27.5471698113208, Blast_Score=74, Evalue=4e-13,
Organism=Drosophila melanogaster, GI19920486, Length=265, Percent_Identity=27.5471698113208, Blast_Score=74, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281364285, Length=338, Percent_Identity=26.3313609467456, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581187, Length=336, Percent_Identity=26.4880952380952, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79337; Mature: 79337

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTGQALQAALAHHEAGRLAEAKTLYDAILTAQPGQPDALHFLGLLACQLKQYDAGIAL
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHH
MEQSLVERPDASYFNNLGNMLRENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARE
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
PAAAMESCARAIELRPGYAEAYNNLGNALQDLGDFDRAASHYGRAIELDPSMAMAHANLS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
AVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTLNPAD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCHHHHHHHHHCCCEEEEECCCC
AGACHNLSVVLLKLQRLDEALVYCRQALQAGPPAALMHVNLGDILRAQGNVDAAVHAYRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHH
ALALVRDDADDVAATVLNRLLFSAAASACVNPADYLADARRYGRHLAARSTRHAHDPRER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AARAQGRPLRVGFVSGDLRLHPVGIFLESVLAHLERTRIDLRVYVTTDEEDAITAKLKPH
HHHCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECCC
ASGWRSIAALGPDAAARMIHDDEIDVLVDLAGHTQSSGLAVFGWKPAPVQASWLGFFAST
CCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHC
GCDAIDYFIGDRYTQPDAEAHHFVEKPWRLPDSFLCFTPPACDVEVGPLPMAARGHPTFG
CCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHH
CFGQLVKIGDDVVRAWSRILHALPDARLLLKAHELGREGVRDATAARFARHGIDPDRLIL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
EGGSPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKGGRFVTHICESVLHA
ECCCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGMGEWVADGEDAYVAKAIAAVRDREPLATLRAGLRAQLLASPLCDARRFAAHLEAAFIG
CCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MWQRYTNSEHEA
HHHHHCCCCCCC
>Mature Secondary Structure
MDGTGQALQAALAHHEAGRLAEAKTLYDAILTAQPGQPDALHFLGLLACQLKQYDAGIAL
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHH
MEQSLVERPDASYFNNLGNMLRENGRLDDAIAHYRRAVALRPDYPEAHNNLGNALRDARE
HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
PAAAMESCARAIELRPGYAEAYNNLGNALQDLGDFDRAASHYGRAIELDPSMAMAHANLS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
AVRHRQLRCAEALAHAQDAIRLAPNLADAHNHAGNAYHGLDRLDAAQASHRTAVTLNPAD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHCHHHHHHHHHCCCEEEEECCCC
AGACHNLSVVLLKLQRLDEALVYCRQALQAGPPAALMHVNLGDILRAQGNVDAAVHAYRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHH
ALALVRDDADDVAATVLNRLLFSAAASACVNPADYLADARRYGRHLAARSTRHAHDPRER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AARAQGRPLRVGFVSGDLRLHPVGIFLESVLAHLERTRIDLRVYVTTDEEDAITAKLKPH
HHHCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEEEECCC
ASGWRSIAALGPDAAARMIHDDEIDVLVDLAGHTQSSGLAVFGWKPAPVQASWLGFFAST
CCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHC
GCDAIDYFIGDRYTQPDAEAHHFVEKPWRLPDSFLCFTPPACDVEVGPLPMAARGHPTFG
CCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHH
CFGQLVKIGDDVVRAWSRILHALPDARLLLKAHELGREGVRDATAARFARHGIDPDRLIL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
EGGSPRAEYFAAYNRIDVALSPFPYPGGTTTAEALWMGVPVLGMKGGRFVTHICESVLHA
ECCCCHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AGMGEWVADGEDAYVAKAIAAVRDREPLATLRAGLRAQLLASPLCDARRFAAHLEAAFIG
CCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MWQRYTNSEHEA
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA