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The map label for this gene is 78064807

Identifier: 78064807

GI number: 78064807

Start: 178967

End: 179857

Strand: Reverse

Name: 78064807

Synonym: Bcep18194_A3330

Alternate gene names: NA

Gene position: 179857-178967 (Counterclockwise)

Preceding gene: 78064810

Following gene: 78064805

Centisome position: 4.87

GC content: 69.25

Gene sequence:

>891_bases
ATGAGCGAAGCACCCCACGAATCTCCCGTCAAAACCCCCGGGCAGCTGATTGCCGTCATCATCGCGTCGTTCGCGATTCC
GATCATCCTGATCGTCCTGTTCGCCAACTATGCGAACCATGCGTTCCGTTACGGCGCCGGCACGGACGCGCTATCCGACG
AACAGGTTGCCGCACGTGTCGCCCCGCTCGCCAAGGTCGACGTGAAGGACGCCAACGCGCCCCGCACGTACAAGACCGGC
GAGGAAGTCTACAAGGCCGTCTGCGTGACCTGCCACGGCACGGGCGCCGCCGGCGCACCGAAGTTCGGCAACAAGGACGA
CTGGGCGCCGCGCATCTCGCAAGGCTTCGACACGCTGCTGAAGACGGCGCTCGCCGGCAAGGGCGCGATGCCGCCGCGCG
GCGGCACGAGCCCCGACGACGTCAGCGACTATGAAATCGCCCGTGCGATCGTCTACATGGCGAACAACGACGGCGCGAAC
TTCCCCGAACCGGCCGCACCGGCCGCCAACGCGGCGCAGCTCGCCAGCGGCGCCGCAGCCGCGTCGGGCACGGCGGACGC
CGCCAGCGCGCAAATCGCCGCGGCCCAGGCCGCGATCGCTGCGATCCCGAAGGCCGGTGAAGCGCCCGCGGCTGCGGCTG
CCCCGGCCGGCGCCGACGCCGGCAAGGCGCTGTACACGTCGACCTGTCAGGCCTGCCACGCGGCGGGCGTGCTCGGAGCG
CCGAAGTTCGGCAGCAAGGAAGACTGGGCGCCGCGCCTGAAGGACTCGATGGATACGGTCTACAACTACGCGCTGCACGG
CAAGGGCGCGATGCCGCCGAAGGGCGGGTCGAGCGCGTCGGATGCCGATGTGAAGGCCGCCGTCGACTACATGGTCAACG
CGTCGAAATAA

Upstream 100 bases:

>100_bases
CGTGATGTAAACGTTCCGTCTATAATCGACCGGGCTTCATTGGACTGCCATTTGCCGTTGCACCGCGCTCACAATTCCTA
ATCATGGAGACGAGGCAAGC

Downstream 100 bases:

>100_bases
CACCGGCCCGGCCGTGCAGTAAAAAACCCCCGCGACGCCTACGCATCGCGGGGGTTTTGTTTTGTCGTTTTGTCGGCGCT
CCACCGGAACGCTCGGCATC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRYGAGTDALSDEQVAARVAPLAKVDVKDANAPRTYKTG
EEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLLKTALAGKGAMPPRGGTSPDDVSDYEIARAIVYMANNDGAN
FPEPAAPAANAAQLASGAAAASGTADAASAQIAAAQAAIAAIPKAGEAPAAAAAPAGADAGKALYTSTCQACHAAGVLGA
PKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSSASDADVKAAVDYMVNASK

Sequences:

>Translated_296_residues
MSEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRYGAGTDALSDEQVAARVAPLAKVDVKDANAPRTYKTG
EEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLLKTALAGKGAMPPRGGTSPDDVSDYEIARAIVYMANNDGAN
FPEPAAPAANAAQLASGAAAASGTADAASAQIAAAQAAIAAIPKAGEAPAAAAAPAGADAGKALYTSTCQACHAAGVLGA
PKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSSASDADVKAAVDYMVNASK
>Mature_295_residues
SEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRYGAGTDALSDEQVAARVAPLAKVDVKDANAPRTYKTGE
EVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLLKTALAGKGAMPPRGGTSPDDVSDYEIARAIVYMANNDGANF
PEPAAPAANAAQLASGAAAASGTADAASAQIAAAQAAIAAIPKAGEAPAAAAAPAGADAGKALYTSTCQACHAAGVLGAP
KFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSSASDADVKAAVDYMVNASK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 29788; Mature: 29656

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRYGAGTDALSDEQVAARV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHH
APLAKVDVKDANAPRTYKTGEEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLL
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KTALAGKGAMPPRGGTSPDDVSDYEIARAIVYMANNDGANFPEPAAPAANAAQLASGAAA
HHHHHCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHH
ASGTADAASAQIAAAQAAIAAIPKAGEAPAAAAAPAGADAGKALYTSTCQACHAAGVLGA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSSASDADVKAAVDYMVNASK
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEAPHESPVKTPGQLIAVIIASFAIPIILIVLFANYANHAFRYGAGTDALSDEQVAARV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHH
APLAKVDVKDANAPRTYKTGEEVYKAVCVTCHGTGAAGAPKFGNKDDWAPRISQGFDTLL
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
KTALAGKGAMPPRGGTSPDDVSDYEIARAIVYMANNDGANFPEPAAPAANAAQLASGAAA
HHHHHCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHCCHH
ASGTADAASAQIAAAQAAIAAIPKAGEAPAAAAAPAGADAGKALYTSTCQACHAAGVLGA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PKFGSKEDWAPRLKDSMDTVYNYALHGKGAMPPKGGSSASDADVKAAVDYMVNASK
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]