| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78064799
Identifier: 78064799
GI number: 78064799
Start: 167527
End: 168663
Strand: Reverse
Name: 78064799
Synonym: Bcep18194_A3322
Alternate gene names: NA
Gene position: 168663-167527 (Counterclockwise)
Preceding gene: 78064800
Following gene: 78064798
Centisome position: 4.57
GC content: 69.39
Gene sequence:
>1137_bases ATGGTGCGTCCGATGTTTCCGGGCCATGGTGCAATGCAAAGGCGGCCGCGCGCGCGCCGCGTCGTGCCGATGCTCGTTGC GTCGCTGTCGTTTGCCGCCGCCGGCCTCGGCGCGTCCGGCAGCGCGCGCGCGGCGATGAATTTCTGCGCGGCGCCGGCAC TGCAGGCGAGCGAGACGACACAGGCCGAGCCGGGCATCCAGGCGCTGATCCGCAGCGTCGACGCGCGTATCGGCGAGCAG CCGAAGGCGATGGCGCGCGTGCACACCGAGGGCACGCTGCCGCACGAAGGTATCTACGACCAGAGCGCCGCCGCGCTGAA GGATCTCGACCTGATGCGCGATGCGGCGCTCGCGTGGCGCGTGACGAACGCGCCGCGCTACCTGCAGCTCGTCGACCGCT TCCTGTCCGCGTGGGTTTCGACCTACCAGCCGAGTTTCAACCCGATCGACGAGACGCGTTTTGAAAGCCTGATCGTCGCG TACGACATGACCGCGAGCGCGCTGCCGGTGAAGACCCGCAACGCGACGGCCGCGTTCATCGCGAAGCTCGGCGCCGGCTA TGTCGCGCAGATCGACGCGCAGAAGCGCCCGCTCACCGGCACCTGGCGCAACAACTGGCAGAGCCACCGGATCAAGCTGA TCGCGCTGTCCGCGTTCACGCTCGGCGATCGCAAGATGATGAATGCCGCGCAGCGGCTGTTCGTCGAGCATCTCGCCGAC AACATCGGCCCGGACGGCAAGACCTGGGACTTCGAGGAACGCGATGCGCTGCATTACGCGGTCTACGACCTGCAGCCGCT GGTGACGGCCGCGCTCGCCGCGCGCCGCTTCAACCGCAACTGGCTGCGCGAACGGGGCGCGAACGGCGCGACGCTCGCGG CCGCGCTCGACTGGCTCGTGCCGTACGCGCTCGGCGAGAAAACGCACGAGGAGTTCGTGAATTCGCCGGTGCCGTTCGAC GCGAAGCGCCGCGAGGCCGGCCTGCCGGGCTACACGGGGCAGTGGGACCCGAAAAACGCCACCGAACTCTTTCATCTGGC CGCGCGGCTCGACGGACGCTATGCCCGCGTCGCGCAGCAGCTTTCCCCAACGCCGCCCGCATGGCTCGCCGCGTGCCTGC CATTGCAGGCGCGCTAG
Upstream 100 bases:
>100_bases GGGTTGCGTGCGGTTTTTTTGATCGCCGCTCGAACCGGTTCACGTTCGCCCGCCAATCCGGCTAACATCACACGCGATCC AGCCAATGAAGGAGTTCCGC
Downstream 100 bases:
>100_bases CATTATTCTTAAAGCAAGGCAGGAATCAACATGGCAGTCAGCGTCTTTGACCTCTTCAAGATCGGTATCGGTCCGTCCAG CTCGCATACGGTCGGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MVRPMFPGHGAMQRRPRARRVVPMLVASLSFAAAGLGASGSARAAMNFCAAPALQASETTQAEPGIQALIRSVDARIGEQ PKAMARVHTEGTLPHEGIYDQSAAALKDLDLMRDAALAWRVTNAPRYLQLVDRFLSAWVSTYQPSFNPIDETRFESLIVA YDMTASALPVKTRNATAAFIAKLGAGYVAQIDAQKRPLTGTWRNNWQSHRIKLIALSAFTLGDRKMMNAAQRLFVEHLAD NIGPDGKTWDFEERDALHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLAAALDWLVPYALGEKTHEEFVNSPVPFD AKRREAGLPGYTGQWDPKNATELFHLAARLDGRYARVAQQLSPTPPAWLAACLPLQAR
Sequences:
>Translated_378_residues MVRPMFPGHGAMQRRPRARRVVPMLVASLSFAAAGLGASGSARAAMNFCAAPALQASETTQAEPGIQALIRSVDARIGEQ PKAMARVHTEGTLPHEGIYDQSAAALKDLDLMRDAALAWRVTNAPRYLQLVDRFLSAWVSTYQPSFNPIDETRFESLIVA YDMTASALPVKTRNATAAFIAKLGAGYVAQIDAQKRPLTGTWRNNWQSHRIKLIALSAFTLGDRKMMNAAQRLFVEHLAD NIGPDGKTWDFEERDALHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLAAALDWLVPYALGEKTHEEFVNSPVPFD AKRREAGLPGYTGQWDPKNATELFHLAARLDGRYARVAQQLSPTPPAWLAACLPLQAR >Mature_378_residues MVRPMFPGHGAMQRRPRARRVVPMLVASLSFAAAGLGASGSARAAMNFCAAPALQASETTQAEPGIQALIRSVDARIGEQ PKAMARVHTEGTLPHEGIYDQSAAALKDLDLMRDAALAWRVTNAPRYLQLVDRFLSAWVSTYQPSFNPIDETRFESLIVA YDMTASALPVKTRNATAAFIAKLGAGYVAQIDAQKRPLTGTWRNNWQSHRIKLIALSAFTLGDRKMMNAAQRLFVEHLAD NIGPDGKTWDFEERDALHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLAAALDWLVPYALGEKTHEEFVNSPVPFD AKRREAGLPGYTGQWDPKNATELFHLAARLDGRYARVAQQLSPTPPAWLAACLPLQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41643; Mature: 41643
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPMFPGHGAMQRRPRARRVVPMLVASLSFAAAGLGASGSARAAMNFCAAPALQASETT CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC QAEPGIQALIRSVDARIGEQPKAMARVHTEGTLPHEGIYDQSAAALKDLDLMRDAALAWR CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE VTNAPRYLQLVDRFLSAWVSTYQPSFNPIDETRFESLIVAYDMTASALPVKTRNATAAFI ECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH AKLGAGYVAQIDAQKRPLTGTWRNNWQSHRIKLIALSAFTLGDRKMMNAAQRLFVEHLAD HHHCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHH NIGPDGKTWDFEERDALHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLAAALDWLV HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PYALGEKTHEEFVNSPVPFDAKRREAGLPGYTGQWDPKNATELFHLAARLDGRYARVAQQ HHHHCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH LSPTPPAWLAACLPLQAR CCCCCHHHHHHHCCCCCC >Mature Secondary Structure MVRPMFPGHGAMQRRPRARRVVPMLVASLSFAAAGLGASGSARAAMNFCAAPALQASETT CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC QAEPGIQALIRSVDARIGEQPKAMARVHTEGTLPHEGIYDQSAAALKDLDLMRDAALAWR CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE VTNAPRYLQLVDRFLSAWVSTYQPSFNPIDETRFESLIVAYDMTASALPVKTRNATAAFI ECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHH AKLGAGYVAQIDAQKRPLTGTWRNNWQSHRIKLIALSAFTLGDRKMMNAAQRLFVEHLAD HHHCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHH NIGPDGKTWDFEERDALHYAVYDLQPLVTAALAARRFNRNWLRERGANGATLAAALDWLV HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PYALGEKTHEEFVNSPVPFDAKRREAGLPGYTGQWDPKNATELFHLAARLDGRYARVAQQ HHHHCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH LSPTPPAWLAACLPLQAR CCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA