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The map label for this gene is bkdR [H]

Identifier: 78064737

GI number: 78064737

Start: 93430

End: 93915

Strand: Direct

Name: bkdR [H]

Synonym: Bcep18194_A3260

Alternate gene names: 78064737

Gene position: 93430-93915 (Clockwise)

Preceding gene: 78064734

Following gene: 78064740

Centisome position: 2.53

GC content: 66.87

Gene sequence:

>486_bases
ATGCTGGAACTCGATCACTTCGATCTCGCGCTGCTGGACGTGCTGCAGCGCTTCGGCCGCGCGACGCATCAGCAGCTCGG
CGAGGAGGTGCCGCTGTCGCCGTCGCAGATCGGCCGGCGGCTGCAGCGGCTCGAGGCGGCCGGCGTGATCGAAGGCTACC
GCGTGATGCTGCGCCCCGAAAAGCTCGGGCTCGGCGTCACCGCGTTCACGAGCCTCAAGCTCAAGCATCACGGCGATTCG
ATCATCGAGCAGTTCCAGCAGCAGATCGACGTGCTGCCCGAAGTGCTCGAATGCCATGCGGTGGTGGGCGATGCCGACTA
CCTGCTGCGGATCGTCGCGCCCGACCTGAACGCGCTGTCGCAATTCGTGATGAAGAAGCTGATGCGCGTGCCGGGCGTCG
ACAGCGTGCGCTCGAACATCGTGCTGACGACCTTCAAGCGCAACGGCGCGCTGCCGCTCGCGCACCTGGCGCCCGGCGCC
GCATAA

Upstream 100 bases:

>100_bases
GTAGAGCGGGCTGCGCGCGGAATGGGCGCAATATTGGCGATGATTCGCTAGATGATGCGATAATCGCGCATCAAATCACG
AATCAATGCGGGGAATACTC

Downstream 100 bases:

>100_bases
CGCGGCGACAGGGCGGCGGCAGGGTTGAAGGCGGCGCGGGTTGCGCCGCCTCGGGGCAGGGCCGGATCAGGCCGTTTCGT
GCTGCGTGTCGGCGTTCAGC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIEGYRVMLRPEKLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSQFVMKKLMRVPGVDSVRSNIVLTTFKRNGALPLAHLAPGA
A

Sequences:

>Translated_161_residues
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIEGYRVMLRPEKLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSQFVMKKLMRVPGVDSVRSNIVLTTFKRNGALPLAHLAPGA
A
>Mature_161_residues
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIEGYRVMLRPEKLGLGVTAFTSLKLKHHGDS
IIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALSQFVMKKLMRVPGVDSVRSNIVLTTFKRNGALPLAHLAPGA
A

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=35.5704697986577, Blast_Score=106, Evalue=6e-25,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34.6666666666667, Blast_Score=97, Evalue=5e-22,
Organism=Escherichia coli, GI1790182, Length=139, Percent_Identity=25.1798561151079, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17780; Mature: 17780

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIEGYRVMLRPE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECHH
KLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
QFVMKKLMRVPGVDSVRSNIVLTTFKRNGALPLAHLAPGAA
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCHHHCCCCCC
>Mature Secondary Structure
MLELDHFDLALLDVLQRFGRATHQQLGEEVPLSPSQIGRRLQRLEAAGVIEGYRVMLRPE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECHH
KLGLGVTAFTSLKLKHHGDSIIEQFQQQIDVLPEVLECHAVVGDADYLLRIVAPDLNALS
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
QFVMKKLMRVPGVDSVRSNIVLTTFKRNGALPLAHLAPGAA
HHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]