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The map label for this gene is xcpS [H]

Identifier: 78064719

GI number: 78064719

Start: 72053

End: 73270

Strand: Reverse

Name: xcpS [H]

Synonym: Bcep18194_A3242

Alternate gene names: 78064719

Gene position: 73270-72053 (Counterclockwise)

Preceding gene: 78064720

Following gene: 78064717

Centisome position: 1.98

GC content: 68.64

Gene sequence:

>1218_bases
ATGCCGGCATTCCGTTTCGAAGCAATCGATTCGGCGGGACGCGCGCAGAAAGGCGTCATCGACGCCGACAGCGCACGTGC
CGCGCGCGGCCAGCTGCGTACGCAGGGGCTGACGCCGCTCGTCGTCGAGCCGGCAGCCAGCGCGACGCGCGGGGCGCGGT
CGCAGCGGCTCGCGTTCGGCCGCAAGCTGTCGCAGCGCGAACAGGCGATCCTCACGCGCCAGCTCGCGAGCCTGCTGATC
GCCGGGCTGCCGCTCGACGAGGCGCTCGGCGTGCTGACCGAGCAGGCCGAGCGCGACTACATCCGCGAACTGATGGCCGC
GATCCGCGCCGAGGTGCTCGGCGGCCATTCGCTCGCGAATGCGCTGGGCCAGCATCCGCGCGACTTCCCGGAAATCTACC
GCGCGCTCGTCGCGGCGGGCGAGCACACCGGCAAGCTCGGCATCGTGCTGTCGCGCCTCGCCGACTACATCGAGCAGAGC
AACGCGCTGAAGCAGAAGATCCTGCTGGCGTTCACGTATCCGGGGATCGTCACGCTGATCGCATTCGGCATCGTCACGTT
CCTGCTGAGCTACGTCGTGCCGCAGGTCGTCAACGTGTTCGCGAGCACGAAGCAGCAACTGCCCGTGCTGACGATCGTGA
TGATGGCGCTGTCGGATTTCGTGCGGCACTGGTGGTGGGCGATCCTGATCGCGGTCGTGCTGATCGTGTGGTTCGTGAAG
GCGACGCTGTCGCGCGACGGGCCTCGCCTCGCGTTCGACCGCTGGGTGCTCACCGCGCCGCTCGCGGGCAAGCTCGTGCG
CGGCTACAACACGGTGCGCTTCGCGAGCACGCTCGGCATCCTCACCGCGGCGGGCGTGCCGATCCTGCGCGCGTTGCAGG
CGGCCGGCGAGACGCTGTCGAACCGTGCGATGCGCGCGAACATCGACGACGCGATCGTGCGGGTGCGCGAAGGCTCCGCG
CTGTCGCGCGCGCTGAACAACGTGAAGACGTTTCCGCCGGTGCTCGTGCACCTGATCCGCTCGGGTGAAGCGACGGGCGA
CGTGACGACGATGCTGGATCGCGCGGCCGAAGGTGAGGCGCGCGAGCTCGAGCGCCGCACGATGTTCCTGACGAGCCTGC
TCGAGCCGCTGCTGATCCTGGCAATGGGGGGCATCGTGCTCGTGATCGTGCTGGCGGTGATGCTGCCGATCATCGAGCTG
AACAACATGGTGCAGTGA

Upstream 100 bases:

>100_bases
GAAGGGATGCGCACGCTGCGCGACGATGCCGAGCGCTGGCTCGCGTCGGGCGCGACGTCGCTCGAGGAAGTGCTGCGCGT
GACGGGAGGCGCATAGCGCG

Downstream 100 bases:

>100_bases
CGGCCTGACCGCTGGTCGGGCCGTCGCCTTCGGCTTCAGCGCACGTAGATCGCCGGGGACGGCGTGTTGGCGGGCAGCTG
GACTTCGGTGCGGGCGCCGT

Product: general secretion pathway protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPAFRFEAIDSAGRAQKGVIDADSARAARGQLRTQGLTPLVVEPAASATRGARSQRLAFGRKLSQREQAILTRQLASLLI
AGLPLDEALGVLTEQAERDYIRELMAAIRAEVLGGHSLANALGQHPRDFPEIYRALVAAGEHTGKLGIVLSRLADYIEQS
NALKQKILLAFTYPGIVTLIAFGIVTFLLSYVVPQVVNVFASTKQQLPVLTIVMMALSDFVRHWWWAILIAVVLIVWFVK
ATLSRDGPRLAFDRWVLTAPLAGKLVRGYNTVRFASTLGILTAAGVPILRALQAAGETLSNRAMRANIDDAIVRVREGSA
LSRALNNVKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEARELERRTMFLTSLLEPLLILAMGGIVLVIVLAVMLPIIEL
NNMVQ

Sequences:

>Translated_405_residues
MPAFRFEAIDSAGRAQKGVIDADSARAARGQLRTQGLTPLVVEPAASATRGARSQRLAFGRKLSQREQAILTRQLASLLI
AGLPLDEALGVLTEQAERDYIRELMAAIRAEVLGGHSLANALGQHPRDFPEIYRALVAAGEHTGKLGIVLSRLADYIEQS
NALKQKILLAFTYPGIVTLIAFGIVTFLLSYVVPQVVNVFASTKQQLPVLTIVMMALSDFVRHWWWAILIAVVLIVWFVK
ATLSRDGPRLAFDRWVLTAPLAGKLVRGYNTVRFASTLGILTAAGVPILRALQAAGETLSNRAMRANIDDAIVRVREGSA
LSRALNNVKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEARELERRTMFLTSLLEPLLILAMGGIVLVIVLAVMLPIIEL
NNMVQ
>Mature_404_residues
PAFRFEAIDSAGRAQKGVIDADSARAARGQLRTQGLTPLVVEPAASATRGARSQRLAFGRKLSQREQAILTRQLASLLIA
GLPLDEALGVLTEQAERDYIRELMAAIRAEVLGGHSLANALGQHPRDFPEIYRALVAAGEHTGKLGIVLSRLADYIEQSN
ALKQKILLAFTYPGIVTLIAFGIVTFLLSYVVPQVVNVFASTKQQLPVLTIVMMALSDFVRHWWWAILIAVVLIVWFVKA
TLSRDGPRLAFDRWVLTAPLAGKLVRGYNTVRFASTLGILTAAGVPILRALQAAGETLSNRAMRANIDDAIVRVREGSAL
SRALNNVKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEARELERRTMFLTSLLEPLLILAMGGIVLVIVLAVMLPIIELN
NMVQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=402, Percent_Identity=34.5771144278607, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1786295, Length=399, Percent_Identity=28.5714285714286, Blast_Score=148, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44063; Mature: 43932

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFRFEAIDSAGRAQKGVIDADSARAARGQLRTQGLTPLVVEPAASATRGARSQRLAFG
CCCCHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHCHHHHHHHHH
RKLSQREQAILTRQLASLLIAGLPLDEALGVLTEQAERDYIRELMAAIRAEVLGGHSLAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ALGQHPRDFPEIYRALVAAGEHTGKLGIVLSRLADYIEQSNALKQKILLAFTYPGIVTLI
HHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGIVTFLLSYVVPQVVNVFASTKQQLPVLTIVMMALSDFVRHWWWAILIAVVLIVWFVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLSRDGPRLAFDRWVLTAPLAGKLVRGYNTVRFASTLGILTAAGVPILRALQAAGETLS
HHHCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NRAMRANIDDAIVRVREGSALSRALNNVKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEA
CCHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
RELERRTMFLTSLLEPLLILAMGGIVLVIVLAVMLPIIELNNMVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAFRFEAIDSAGRAQKGVIDADSARAARGQLRTQGLTPLVVEPAASATRGARSQRLAFG
CCCHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHCHHHHHHHHH
RKLSQREQAILTRQLASLLIAGLPLDEALGVLTEQAERDYIRELMAAIRAEVLGGHSLAN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ALGQHPRDFPEIYRALVAAGEHTGKLGIVLSRLADYIEQSNALKQKILLAFTYPGIVTLI
HHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGIVTFLLSYVVPQVVNVFASTKQQLPVLTIVMMALSDFVRHWWWAILIAVVLIVWFVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLSRDGPRLAFDRWVLTAPLAGKLVRGYNTVRFASTLGILTAAGVPILRALQAAGETLS
HHHCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NRAMRANIDDAIVRVREGSALSRALNNVKTFPPVLVHLIRSGEATGDVTTMLDRAAEGEA
CCHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHH
RELERRTMFLTSLLEPLLILAMGGIVLVIVLAVMLPIIELNNMVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]