| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064716
Identifier: 78064716
GI number: 78064716
Start: 70370
End: 70939
Strand: Reverse
Name: 78064716
Synonym: Bcep18194_A3239
Alternate gene names: NA
Gene position: 70939-70370 (Counterclockwise)
Preceding gene: 78064717
Following gene: 78064715
Centisome position: 1.92
GC content: 71.93
Gene sequence:
>570_bases ATGCTCGCCATTCGCACGACCTCCCGCTGCGGCCGCGATCGCCGTGTGCGTCGCGGCGCGGCTTCGTCCGCGCCGGCGCA TGCCGACGGCGGGCGGGCGTTGCACTGCGCGCGGCGTCATCGCGCGCGCGGCTTCACGCTGCTCGAAATGCTGGTCGTGC TCGTGATCGCGGGCCTGCTCGTGTCGCTCGCGTCCTTGTCGCTCACGCGCAATCCGCGCACCGACCTGCGCGAGGAAGCG CAGCGCATCGCGCTGCTGTTCGAGACGGCCGGCGACGAAGCGCAGGTGCGGGCCCGGCCGATCGCGTGGCAGCCGACCGC GCACGGCTTCCGTTTCGACGTGAGCTCGTCCGACGGCTGGCGCACGCTGCGCGACGACCTGCTGCGCCCGCGTGACTGGG ACGGCGGCGTCACCGGCGCCGATATCGACTATCCGGGGTCCGACACGCATGCGAATCGTGTCGTGTTCGGTACCGAGAGC ATCGACACGCCGGTGCGCGTGACGCTGCATTCGGCGGCCGGCAGCGCGACGATCGTCGGCACCGGCAACGGCCGCTACGA GGTGCAATGA
Upstream 100 bases:
>100_bases CGGCGCCGACGGCAAGGAAGGCGGCGAAGGCAACGACACCGACATCGGTTCGTGGCAATAAGCCTTCACTGACCGGCCAG ACGCATCGTTCCCGTTCTCC
Downstream 100 bases:
>100_bases CGATGCGTCGTCGCCTGCCCTCTTCCGTTTCTTCATCGCGCGGTTTCACGATGATCGAGGTGCTGGTCGCACTCGCGATC ATCGCGGTCGCGCTCGCCGC
Product: general secretion pathway protein H
Products: NA
Alternate protein names: Type II Secretory Pathway Pseudopilin PulG
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MLAIRTTSRCGRDRRVRRGAASSAPAHADGGRALHCARRHRARGFTLLEMLVVLVIAGLLVSLASLSLTRNPRTDLREEA QRIALLFETAGDEAQVRARPIAWQPTAHGFRFDVSSSDGWRTLRDDLLRPRDWDGGVTGADIDYPGSDTHANRVVFGTES IDTPVRVTLHSAAGSATIVGTGNGRYEVQ
Sequences:
>Translated_189_residues MLAIRTTSRCGRDRRVRRGAASSAPAHADGGRALHCARRHRARGFTLLEMLVVLVIAGLLVSLASLSLTRNPRTDLREEA QRIALLFETAGDEAQVRARPIAWQPTAHGFRFDVSSSDGWRTLRDDLLRPRDWDGGVTGADIDYPGSDTHANRVVFGTES IDTPVRVTLHSAAGSATIVGTGNGRYEVQ >Mature_189_residues MLAIRTTSRCGRDRRVRRGAASSAPAHADGGRALHCARRHRARGFTLLEMLVVLVIAGLLVSLASLSLTRNPRTDLREEA QRIALLFETAGDEAQVRARPIAWQPTAHGFRFDVSSSDGWRTLRDDLLRPRDWDGGVTGADIDYPGSDTHANRVVFGTES IDTPVRVTLHSAAGSATIVGTGNGRYEVQ
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20568; Mature: 20568
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIRTTSRCGRDRRVRRGAASSAPAHADGGRALHCARRHRARGFTLLEMLVVLVIAGLL CEEEECCHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSLASLSLTRNPRTDLREEAQRIALLFETAGDEAQVRARPIAWQPTAHGFRFDVSSSDGW HHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCEEEECCEEECCCCCCEEEECCCCCCC RTLRDDLLRPRDWDGGVTGADIDYPGSDTHANRVVFGTESIDTPVRVTLHSAAGSATIVG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEE TGNGRYEVQ CCCCEEEEC >Mature Secondary Structure MLAIRTTSRCGRDRRVRRGAASSAPAHADGGRALHCARRHRARGFTLLEMLVVLVIAGLL CEEEECCHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH VSLASLSLTRNPRTDLREEAQRIALLFETAGDEAQVRARPIAWQPTAHGFRFDVSSSDGW HHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCEEEECCEEECCCCCCEEEECCCCCCC RTLRDDLLRPRDWDGGVTGADIDYPGSDTHANRVVFGTESIDTPVRVTLHSAAGSATIVG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEEEEE TGNGRYEVQ CCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA