| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is mod [H]
Identifier: 78064690
GI number: 78064690
Start: 44862
End: 46880
Strand: Reverse
Name: mod [H]
Synonym: Bcep18194_A3213
Alternate gene names: 78064690
Gene position: 46880-44862 (Counterclockwise)
Preceding gene: 78064691
Following gene: 78064689
Centisome position: 1.27
GC content: 67.61
Gene sequence:
>2019_bases ATGGAAAAGACGATGCAGAAACTCGATGCGGCAAGCCCGCAGGCGATGTCGACCGATTTCACCGCCGACAACGTCGCGCG CCTGAAGGCGCTGTTCCCCGAACTCGTGACCGAAGGCCCCGGCGGCGCGTCGGTCGACGTCGACGTGCTGAAGGCGCTGA TCGGCGAACGCACGGTCGGCGACGCCGACGAGCGCTACGGCTTCCACTGGCATGGCAAGCGCAGCGCGCGCCAGGCCGCG CTCACGCCGTCGACGGGCACGCTGCGCCCCTGCCCCGACGACAGCGTCGCGTGGGACGACACGCGCCATCTCGTGATCGA GGGCGACAACCTCGACGTGATGAAGCTGCTGCACAAGAGTTACGCAGGCAAGGTGAAGCTCGTCTACATCGACCCGCCGT ACAACACCGGCAGCGATTTCGTCTATCCGGACGACTTCAGCGACAGCATCCGCCACTACCTGGCGATGACCGGGCAGACC CAGGGCGGCGTGAAGCGCAGCACCAATACCGAGGCGAACGGCCGGTTCCACACCGACTGGCTGAACATGATGTATCCGCG CCTGAAGCTCGCGCACGCGCTGCTGTCCGACGAAGGGCTGATCGCCGTGCACATCGACGAGCATGAAGTGCATGCGCTCG TGCTGATGCTGCGCGAGATCTTCGGCGAGGAGAACGAGCTCGGCGTCGCCGTGTGGGACAAGCGCAACCCGAAGGGCGAC GCGCGCGGCGTCGCGTACCAGCACGAATCGCTGGTGCTGTTCGCGCGCAACGCCGAGACGCTGCTCGAACAGGCGCCGCT CAAGCGCCCGAAGCGCAATGCGCAGCGCATGCTCGACGCCGCGCACGACGCCGTGTACCGCAGCGGCAACCCGAAGGACG CGCAGAAGGCGTACCGCGCGTGGATGAAGGCGCAGACCAACCTGTCCGGCGGCGAGGTGATGTACGACCGGCTGTCGGAA GAAGGCCGCGTGTACCGCCTCGTGTCGATGGCCTGGCCGAACAAGAAGAAGGCGCCGGAAGAGTATTTCACGCCGCTGAT CCACCCGGTCACCGGCAAGCCGTGCGCGATGCCTGCGCGCGGCTGGCGCAACCCGCCCGCGACGATGCAGGCGCTGATCG AGCGCGGCCAGATCGAATTCGGCGCGGATGAAAGCACGCAGCCGCAACGGATCTACTACCTCGACGAGAACATGTACGAG AACGTGCCGTCGGTGCTGCCGTTCGCCGGCTCCGACGACGCGCTGCTGAAGACGCTCGGCATCCCGTTCGACCTGCCGAA GCCGGTCGATTTCGCGGCGGCCGTGATCGGCTGGTGCACGCGCGGCGACGACATCGTGCTCGACTGCTTCGCCGGCTCCG GCTCGACCGGCCACGCGGTGATGCAGGTGAACGCGACCGACGGCGGCGCGCGCCGCTACGTGCTCGTGCAGTTGCCCGAA GCGCTCGACCGCCGCGACAAGACGCAGCAGAGCGCCGCCGATTTCTGCACGAAGCTGAAGAAGCCGCTGACGCTCGCCGA AATCACGAAGGAACGCCTGCGCCGCGCCGCGCAGCAGGTCGCACGCGACTATCCGGAAAGCTATGGCGACCTCGGCTTCC GCGTGTACCGGCTCGACACGACCAACGTGATCGAGTGGGATCCGCGCCGCGACGACTTCGACCATGCGCTGTTCGCGTCC GTCGAGCACGTGAAGACCGGCCGCACCGAGGACGACCTGCTCGCCGAGCTGACGCTGAAGCTCGGCCTCGACCTGTGCAC GCCGGTCGAGCATCACCAGGTGGCGGGCAAGACCGTGCACCTGATCGGCCGCTCGATCGTCGCGTGCTTCGATGCGCGCA TCGCGCGCGACGACGCGGGCCCGCTCGCCGACGGCATCGTCGACCTGCTCGATGCGACCGGCACGACGCACGACGTCACG TGCCTGTTCCGCGACAGCGGCTTCGTCGACGACGTCGCGAAGCTCAATCTCGCCGCGCTGCTCGAACAGCACGGCGTGAA GCGCGTGCGGAGCCTGTGA
Upstream 100 bases:
>100_bases TCGGCCGGGTGACTCGATAGCGTTTCGGGTTTGCCCGGGCGGCCGTTGCCGCCGGTGCTGCGAGCGCGCCCGATGTCCTG GCGCGCGCGGCCGGGCTCCG
Downstream 100 bases:
>100_bases TGCGGCTGCATTTCGAAGCGGATCTCGACTACCAGCGCGAGGCGATCGACGCCGTCTGCGACCTGTTTCGCGGCCAGGAA TCGTATCGCGGCGACTTCAG
Product: site-specific DNA-methyltransferase (adenine-specific)
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MEKTMQKLDAASPQAMSTDFTADNVARLKALFPELVTEGPGGASVDVDVLKALIGERTVGDADERYGFHWHGKRSARQAA LTPSTGTLRPCPDDSVAWDDTRHLVIEGDNLDVMKLLHKSYAGKVKLVYIDPPYNTGSDFVYPDDFSDSIRHYLAMTGQT QGGVKRSTNTEANGRFHTDWLNMMYPRLKLAHALLSDEGLIAVHIDEHEVHALVLMLREIFGEENELGVAVWDKRNPKGD ARGVAYQHESLVLFARNAETLLEQAPLKRPKRNAQRMLDAAHDAVYRSGNPKDAQKAYRAWMKAQTNLSGGEVMYDRLSE EGRVYRLVSMAWPNKKKAPEEYFTPLIHPVTGKPCAMPARGWRNPPATMQALIERGQIEFGADESTQPQRIYYLDENMYE NVPSVLPFAGSDDALLKTLGIPFDLPKPVDFAAAVIGWCTRGDDIVLDCFAGSGSTGHAVMQVNATDGGARRYVLVQLPE ALDRRDKTQQSAADFCTKLKKPLTLAEITKERLRRAAQQVARDYPESYGDLGFRVYRLDTTNVIEWDPRRDDFDHALFAS VEHVKTGRTEDDLLAELTLKLGLDLCTPVEHHQVAGKTVHLIGRSIVACFDARIARDDAGPLADGIVDLLDATGTTHDVT CLFRDSGFVDDVAKLNLAALLEQHGVKRVRSL
Sequences:
>Translated_672_residues MEKTMQKLDAASPQAMSTDFTADNVARLKALFPELVTEGPGGASVDVDVLKALIGERTVGDADERYGFHWHGKRSARQAA LTPSTGTLRPCPDDSVAWDDTRHLVIEGDNLDVMKLLHKSYAGKVKLVYIDPPYNTGSDFVYPDDFSDSIRHYLAMTGQT QGGVKRSTNTEANGRFHTDWLNMMYPRLKLAHALLSDEGLIAVHIDEHEVHALVLMLREIFGEENELGVAVWDKRNPKGD ARGVAYQHESLVLFARNAETLLEQAPLKRPKRNAQRMLDAAHDAVYRSGNPKDAQKAYRAWMKAQTNLSGGEVMYDRLSE EGRVYRLVSMAWPNKKKAPEEYFTPLIHPVTGKPCAMPARGWRNPPATMQALIERGQIEFGADESTQPQRIYYLDENMYE NVPSVLPFAGSDDALLKTLGIPFDLPKPVDFAAAVIGWCTRGDDIVLDCFAGSGSTGHAVMQVNATDGGARRYVLVQLPE ALDRRDKTQQSAADFCTKLKKPLTLAEITKERLRRAAQQVARDYPESYGDLGFRVYRLDTTNVIEWDPRRDDFDHALFAS VEHVKTGRTEDDLLAELTLKLGLDLCTPVEHHQVAGKTVHLIGRSIVACFDARIARDDAGPLADGIVDLLDATGTTHDVT CLFRDSGFVDDVAKLNLAALLEQHGVKRVRSL >Mature_672_residues MEKTMQKLDAASPQAMSTDFTADNVARLKALFPELVTEGPGGASVDVDVLKALIGERTVGDADERYGFHWHGKRSARQAA LTPSTGTLRPCPDDSVAWDDTRHLVIEGDNLDVMKLLHKSYAGKVKLVYIDPPYNTGSDFVYPDDFSDSIRHYLAMTGQT QGGVKRSTNTEANGRFHTDWLNMMYPRLKLAHALLSDEGLIAVHIDEHEVHALVLMLREIFGEENELGVAVWDKRNPKGD ARGVAYQHESLVLFARNAETLLEQAPLKRPKRNAQRMLDAAHDAVYRSGNPKDAQKAYRAWMKAQTNLSGGEVMYDRLSE EGRVYRLVSMAWPNKKKAPEEYFTPLIHPVTGKPCAMPARGWRNPPATMQALIERGQIEFGADESTQPQRIYYLDENMYE NVPSVLPFAGSDDALLKTLGIPFDLPKPVDFAAAVIGWCTRGDDIVLDCFAGSGSTGHAVMQVNATDGGARRYVLVQLPE ALDRRDKTQQSAADFCTKLKKPLTLAEITKERLRRAAQQVARDYPESYGDLGFRVYRLDTTNVIEWDPRRDDFDHALFAS VEHVKTGRTEDDLLAELTLKLGLDLCTPVEHHQVAGKTVHLIGRSIVACFDARIARDDAGPLADGIVDLLDATGTTHDVT CLFRDSGFVDDVAKLNLAALLEQHGVKRVRSL
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 74648; Mature: 74648
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTMQKLDAASPQAMSTDFTADNVARLKALFPELVTEGPGGASVDVDVLKALIGERTVG CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC DADERYGFHWHGKRSARQAALTPSTGTLRPCPDDSVAWDDTRHLVIEGDNLDVMKLLHKS CCHHCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH YAGKVKLVYIDPPYNTGSDFVYPDDFSDSIRHYLAMTGQTQGGVKRSTNTEANGRFHTDW HCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHH LNMMYPRLKLAHALLSDEGLIAVHIDEHEVHALVLMLREIFGEENELGVAVWDKRNPKGD HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC ARGVAYQHESLVLFARNAETLLEQAPLKRPKRNAQRMLDAAHDAVYRSGNPKDAQKAYRA CCCEEEECCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WMKAQTNLSGGEVMYDRLSEEGRVYRLVSMAWPNKKKAPEEYFTPLIHPVTGKPCAMPAR HHHHHCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCC GWRNPPATMQALIERGQIEFGADESTQPQRIYYLDENMYENVPSVLPFAGSDDALLKTLG CCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCHHHHHHHC IPFDLPKPVDFAAAVIGWCTRGDDIVLDCFAGSGSTGHAVMQVNATDGGARRYVLVQLPE CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCH ALDRRDKTQQSAADFCTKLKKPLTLAEITKERLRRAAQQVARDYPESYGDLGFRVYRLDT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECC TNVIEWDPRRDDFDHALFASVEHVKTGRTEDDLLAELTLKLGLDLCTPVEHHQVAGKTVH CCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH LIGRSIVACFDARIARDDAGPLADGIVDLLDATGTTHDVTCLFRDSGFVDDVAKLNLAAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH LEQHGVKRVRSL HHHHHHHHHHCC >Mature Secondary Structure MEKTMQKLDAASPQAMSTDFTADNVARLKALFPELVTEGPGGASVDVDVLKALIGERTVG CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCC DADERYGFHWHGKRSARQAALTPSTGTLRPCPDDSVAWDDTRHLVIEGDNLDVMKLLHKS CCHHCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH YAGKVKLVYIDPPYNTGSDFVYPDDFSDSIRHYLAMTGQTQGGVKRSTNTEANGRFHTDW HCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHH LNMMYPRLKLAHALLSDEGLIAVHIDEHEVHALVLMLREIFGEENELGVAVWDKRNPKGD HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC ARGVAYQHESLVLFARNAETLLEQAPLKRPKRNAQRMLDAAHDAVYRSGNPKDAQKAYRA CCCEEEECCEEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WMKAQTNLSGGEVMYDRLSEEGRVYRLVSMAWPNKKKAPEEYFTPLIHPVTGKPCAMPAR HHHHHCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCC GWRNPPATMQALIERGQIEFGADESTQPQRIYYLDENMYENVPSVLPFAGSDDALLKTLG CCCCCHHHHHHHHHCCCEEECCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCHHHHHHHC IPFDLPKPVDFAAAVIGWCTRGDDIVLDCFAGSGSTGHAVMQVNATDGGARRYVLVQLPE CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCH ALDRRDKTQQSAADFCTKLKKPLTLAEITKERLRRAAQQVARDYPESYGDLGFRVYRLDT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECC TNVIEWDPRRDDFDHALFASVEHVKTGRTEDDLLAELTLKLGLDLCTPVEHHQVAGKTVH CCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHH LIGRSIVACFDARIARDDAGPLADGIVDLLDATGTTHDVTCLFRDSGFVDDVAKLNLAAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH LEQHGVKRVRSL HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]