| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78064684
Identifier: 78064684
GI number: 78064684
Start: 37879
End: 39102
Strand: Direct
Name: 78064684
Synonym: Bcep18194_A3207
Alternate gene names: NA
Gene position: 37879-39102 (Clockwise)
Preceding gene: 78064683
Following gene: 78064685
Centisome position: 1.03
GC content: 69.12
Gene sequence:
>1224_bases ATGAGCCTCCTTGCATCACAGCTTCAGCGCCGTTACCAGGACGTGCGCGCCCATAGCGTCGCGTTGACCGCGACGCTGTC CGCCGAGGATCAGGCCGTGCAGTCGATGCCCGACGCCAGCCCGACGAAATGGCACCTCGCGCATACGACCTGGTTCTTCG AAACCGTCGTGCTGATGCGCCGCGTGCCCGGCTACGCGCCGTTCGACGCGGCCTTCCAGTTCCTCTTCAACTCCTATTAC GAAGCGCTCGGCCCGCGCCATCCGCGGCCGCAACGCGGGCTGCTCACGCGCCCGTCGCTCGACGAGGTGCATGCGTACCG GCAGCACGTCGATGACGCGATGCTGCGCGCGCTGGCCGGCGCCGATGCGGCGTTGCTCGAGACGATCGCGCCCGAGGTCG TGCTCGGCCTGCATCACGAGCAGCAGCACCAGGAGCTGATCGTCACCGACATGCTGCACGCGTTCTCGTGCAACCCGCTG AAGCCGGCATTCCGGCCGCGCAACGGGACGGACGCGGGCGCGATGGCCGCGGGCGATGCCGGCCCGCAGCACTGGCTGCA TCAGCCGGGCGGGCTCGTCGAGATCGGCCACGACGGCGATGCGTTCTCGTTCGACAACGAACGGCCGCGCCACACGGCGC TCGTGCGGCCGTACGAGATCGCGAACCGCCTGGTGACGAATGCGGAATTCGCGGCGTTCGTCGCCGACGGCGGCTATACG CGGCCCGAGTTCTGGCTGTCGGACGGTTGGGCCACGGTGCAGCGGGAAGGGTGGCAAGGGCCCGCGTACTGGATGCCCGA CGACGACGATGCGGCCGCCACGCGCGTACGGCGCACGTTCGGCCTGCATGGCGTCGAACCGCTCGCTCCCGACGCACCGG TGTGCCACGTGAGCTTCTACGAAGCGGCCGCGTACGCGGACTGGGCTGGTGCGCGCCTGCCGACCGAATTCGAATGGGAA GCCGCGTTCCCCGCCGAAGGCATCCGGCAGATGCTCGGGCACGTGTGGCAATGGACGCGCTCGTCGTACGAGCCGTACCC GGGCTTCCGGCCGCTCGCGGGTGTCGCGGCCGAATACAACGGCAAGTTCATGGTCGGCCAGCAGGTCCTGCGCGGCAGCA GCATCGCAACGCCGCCTGGACACGAACGGCCGACGTACCGCAATTTCTTTCCGCCGGCCGCGCGCTGGCAATTCACGGGA GTGCGACTTGCGCGAGACGTCTGA
Upstream 100 bases:
>100_bases CGCAGCAGCAGGTCGCACGTCAGCCGCGCGCATCACGCGCAAGGCTTTCCCTTTTCCGGCAACACGCAACGCAGCGAATC GCGACGTGGACGGTAAACCG
Downstream 100 bases:
>100_bases CCAGACGGCCACGAGCGGTGGCCAGCAACCCGCCCGCGATTCGCGGCCGAGCGCGTTCGCGCGCGACCTGATCGACGGAC TGTCGCGTACGCCGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MSLLASQLQRRYQDVRAHSVALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMRRVPGYAPFDAAFQFLFNSYY EALGPRHPRPQRGLLTRPSLDEVHAYRQHVDDAMLRALAGADAALLETIAPEVVLGLHHEQQHQELIVTDMLHAFSCNPL KPAFRPRNGTDAGAMAAGDAGPQHWLHQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFVADGGYT RPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFYEAAAYADWAGARLPTEFEWE AAFPAEGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYNGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTG VRLARDV
Sequences:
>Translated_407_residues MSLLASQLQRRYQDVRAHSVALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMRRVPGYAPFDAAFQFLFNSYY EALGPRHPRPQRGLLTRPSLDEVHAYRQHVDDAMLRALAGADAALLETIAPEVVLGLHHEQQHQELIVTDMLHAFSCNPL KPAFRPRNGTDAGAMAAGDAGPQHWLHQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFVADGGYT RPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFYEAAAYADWAGARLPTEFEWE AAFPAEGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYNGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTG VRLARDV >Mature_406_residues SLLASQLQRRYQDVRAHSVALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMRRVPGYAPFDAAFQFLFNSYYE ALGPRHPRPQRGLLTRPSLDEVHAYRQHVDDAMLRALAGADAALLETIAPEVVLGLHHEQQHQELIVTDMLHAFSCNPLK PAFRPRNGTDAGAMAAGDAGPQHWLHQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFVADGGYTR PEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFYEAAAYADWAGARLPTEFEWEA AFPAEGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYNGKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTGV RLARDV
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45483; Mature: 45352
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLASQLQRRYQDVRAHSVALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMR CCHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH RVPGYAPFDAAFQFLFNSYYEALGPRHPRPQRGLLTRPSLDEVHAYRQHVDDAMLRALAG HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC ADAALLETIAPEVVLGLHHEQQHQELIVTDMLHAFSCNPLKPAFRPRNGTDAGAMAAGDA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GPQHWLHQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFVADGGYT CCHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHEECHHHHHHHHHCCCHHEEEEECCCCC RPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFY CCCEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHH EAAAYADWAGARLPTEFEWEAAFPAEGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYN HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC GKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTGVRLARDV CEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHCCCC >Mature Secondary Structure SLLASQLQRRYQDVRAHSVALTATLSAEDQAVQSMPDASPTKWHLAHTTWFFETVVLMR CHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH RVPGYAPFDAAFQFLFNSYYEALGPRHPRPQRGLLTRPSLDEVHAYRQHVDDAMLRALAG HCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC ADAALLETIAPEVVLGLHHEQQHQELIVTDMLHAFSCNPLKPAFRPRNGTDAGAMAAGDA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GPQHWLHQPGGLVEIGHDGDAFSFDNERPRHTALVRPYEIANRLVTNAEFAAFVADGGYT CCHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHEECHHHHHHHHHCCCHHEEEEECCCCC RPEFWLSDGWATVQREGWQGPAYWMPDDDDAAATRVRRTFGLHGVEPLAPDAPVCHVSFY CCCEEECCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHH EAAAYADWAGARLPTEFEWEAAFPAEGIRQMLGHVWQWTRSSYEPYPGFRPLAGVAAEYN HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC GKFMVGQQVLRGSSIATPPGHERPTYRNFFPPAARWQFTGVRLARDV CEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA