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The map label for this gene is fecI [C]

Identifier: 78064681

GI number: 78064681

Start: 35982

End: 36863

Strand: Reverse

Name: fecI [C]

Synonym: Bcep18194_A3204

Alternate gene names: 78064681

Gene position: 36863-35982 (Counterclockwise)

Preceding gene: 78064682

Following gene: 78064679

Centisome position: 1.0

GC content: 66.78

Gene sequence:

>882_bases
ATGCCGAACCTCGACCCGGCCAAGGGCAGCGCCGAAGAACGGGCCGATGCGGCCGCGAGTTTCGACCCGCTGCGCCGCAC
GCTGATCCGCGTCGCGTACCGGATGCTCGGTTCCGTCGCGGATGCCGAGGACATGGTGCAGGAGGCGTTCATCCGCTGGA
TGGACGTCGACCGCACCGAGGTGCGCATCCCTGAAGCGTTCCTGCGCCGCATGGTGATGCGCATGTGCCTCGACCAGCTG
AAGTCCGCGCGGCACCAGCGCGAGACGTATATCGGCCCGTGGCTGCCCGAGCCGGTCGTCGAGGAAGATGAACAGGAAGA
CGTCACGCTGCCGCTGATGCTCGCACTCGAACGGCTCTCGCCGCTCGAACGCGCGGCGTTCCTGCTCCATGACGTATTCG
GCCTCGAGTTCGACGAGGTAGCCACGACGATCCAGCGCGACCCGGCCGCGTGCCGGCAGCTCGCCGCGCGGGCCCGCACG
CATGTGCGCGAGGCGCGGCCGCGTTTCCACGTCGAGAAGCAGCGCGGGATCGAATTGGCGGAAGCGTTCTTTGCGGCGTC
ACGCAGCGGCGACATGCGCGCACTCGGCGCGATGCTCGCCGAGGACGTGAGCCTGCATTCGGACGGCGGCGGCAAGCGCA
CGGCTGCAGGCAAGCCCGTGTTCGGCTTCGAACTCGTGATGAAGGTGCACGCGTACCTGGCCGAGCTGTTCACCACGCAT
GCGTCGAAGCTCGTGCGGGCCGGGTTCATCAACGGGCTGCCGGGTTTCGTCACGGAGGAATCCGATGGCGAGCTGCAGAC
CACCGCGCTCGAGATCGAGGACGGGAAGATCGTTGCGATCTATGTCGTGCGCAATCCTGACAAGTTGAAGCATCTGCATT
GA

Upstream 100 bases:

>100_bases
TGATCAACGTGATCAACGGCTGGAACCGGCTCGCGGTCGGCTTCGGGCTGTGGATCGATCCGGCTGATGCAAAAGCCGCC
GCCGCGAAGATGGTGGCCTG

Downstream 100 bases:

>100_bases
GTGCGGCGGGATCGCATGTCGGGTGCCGTGCGCATGTACGACCGCGATGCGCCCTTTTCTCCGTCCTGCCGCCCTGCCTT
ACCGGCGGCCGGTTCCTGCG

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma Factor Sigma; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-70-Like Factor; RNA Polymerase Sigma Subunit; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; ECF Subfamily RNA Polymerase Sigma-; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPNLDPAKGSAEERADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTEVRIPEAFLRRMVMRMCLDQL
KSARHQRETYIGPWLPEPVVEEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARART
HVREARPRFHVEKQRGIELAEAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMKVHAYLAELFTTH
ASKLVRAGFINGLPGFVTEESDGELQTTALEIEDGKIVAIYVVRNPDKLKHLH

Sequences:

>Translated_293_residues
MPNLDPAKGSAEERADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTEVRIPEAFLRRMVMRMCLDQL
KSARHQRETYIGPWLPEPVVEEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARART
HVREARPRFHVEKQRGIELAEAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMKVHAYLAELFTTH
ASKLVRAGFINGLPGFVTEESDGELQTTALEIEDGKIVAIYVVRNPDKLKHLH
>Mature_292_residues
PNLDPAKGSAEERADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTEVRIPEAFLRRMVMRMCLDQLK
SARHQRETYIGPWLPEPVVEEDEQEDVTLPLMLALERLSPLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARARTH
VREARPRFHVEKQRGIELAEAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMKVHAYLAELFTTHA
SKLVRAGFINGLPGFVTEESDGELQTTALEIEDGKIVAIYVVRNPDKLKHLH

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32864; Mature: 32733

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLDPAKGSAEERADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
VRIPEAFLRRMVMRMCLDQLKSARHQRETYIGPWLPEPVVEEDEQEDVTLPLMLALERLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARARTHVREARPRFHVEKQRGIELA
HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMKVHAYLAELFTTH
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ASKLVRAGFINGLPGFVTEESDGELQTTALEIEDGKIVAIYVVRNPDKLKHLH
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC
>Mature Secondary Structure 
PNLDPAKGSAEERADAAASFDPLRRTLIRVAYRMLGSVADAEDMVQEAFIRWMDVDRTE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
VRIPEAFLRRMVMRMCLDQLKSARHQRETYIGPWLPEPVVEEDEQEDVTLPLMLALERLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PLERAAFLLHDVFGLEFDEVATTIQRDPAACRQLAARARTHVREARPRFHVEKQRGIELA
HHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
EAFFAASRSGDMRALGAMLAEDVSLHSDGGGKRTAAGKPVFGFELVMKVHAYLAELFTTH
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ASKLVRAGFINGLPGFVTEESDGELQTTALEIEDGKIVAIYVVRNPDKLKHLH
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA