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The map label for this gene is glpQ [H]

Identifier: 78050035

GI number: 78050035

Start: 5166721

End: 5167779

Strand: Reverse

Name: glpQ [H]

Synonym: XCV4479

Alternate gene names: 78050035

Gene position: 5167779-5166721 (Counterclockwise)

Preceding gene: 78050036

Following gene: 78050032

Centisome position: 99.79

GC content: 64.87

Gene sequence:

>1059_bases
ATGGTTGGCATGAACGGCCCGGCAGTTGCCGAAGCGCCGCTGGCCAAGACGGTGCAGATCTTTGCGCACCGCGGCGCCAG
TGCGCTGCGTCCGGAACACACCCTGGCCTCCTATGCCAAAGCCATTGTCGATGGCGCCGATTTTGTCGAGCCGGATCTGG
TGTCCACCAAGGATGGCGTACTGATCGCGCGGCACGAGAACGAGATCGGTGGCACCACCGATGTGGCCAGCCACCCGGAA
TTCGCTGCGCGCAAGACCCGCAAGACCATCGACGGTCAGGCGATGGAAGGCTGGTTCACCGAAGATTTCACCCTGGCCGA
GTTGAAGACGCTACGTGCGCGCGAGCGGCTGCCGCAGCTGCGTGGCACGCGCTGGGATGGCCAGTTCCAGATCGTGACCT
TGGACGAGATCATCGATTTCGTCGCGGCCGAATCTGCCGCGACCGGCCGCACGATCGGGCTGATTCCGGAGATCAAGCAT
CCCAGCTATTTCAAGGCGCTGGGCCTGCCGATGGAAGACAAGATGCTGGCCACCTTGCAGGCGCATGCCTATACCCGGAC
TGCGCCGGTGATCATCCAGTCGTTCGAGACCGGCAATCTGCGCTATCTGCGCGACAAGATCGGGCGCACCAGCAACATCG
GCCTGCTGCAGTTGCTCGGTGGCGCGCAGATGGCGCTGCCCGCCGGCACGGACGATGCGCCGAAGACCTACGGGCAGATG
ATCACGCCGGACGGCCTGAAGCAGGTCGCGACATATGCCGATGCGATCGGCCCCGACATCCGCAGCATCATCCCGCTGGA
TGCGCAGCAACGTTTGGGCGCGCCCACCAGCCTGGTGCACGACGCACATGCGGCCGGGTTGCAGGTGCAGCCGTATACGT
TCCGTCCAGAAAATTATTTTCTGGCCGCCAACAACCGCAGCAGCGGCGCGGTGACCGAGCGCAACGACGCCGGTGCGTTG
GTCGAGTTGCAGGCGTATCTGGATGCGGGCATCGATGCGTTCTTCGCCGACGACCCGGGCCTGGCGCGGCGCGCATTGAG
CGGGCGCCCCGCGCGCTAA

Upstream 100 bases:

>100_bases
CGACCAGACTCGCCCGGCGGTCAGGCGTCGATTCGGTACCTGTTTTTCGTTGGAGAGATGCATGATGCAGTTCGGTCGTA
TCTGGTTGGTGGGAGCGATG

Downstream 100 bases:

>100_bases
TCAGCATCTGTAGGAGCGCGCCAGAGCGCAACGGGCTCTAGCGGTACAGCCCGTCGCGCGCAGGCACGCGCCTACGCAGG
GGATCGACCGATTCGTGGTT

Product: putative glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MVGMNGPAVAEAPLAKTVQIFAHRGASALRPEHTLASYAKAIVDGADFVEPDLVSTKDGVLIARHENEIGGTTDVASHPE
FAARKTRKTIDGQAMEGWFTEDFTLAELKTLRARERLPQLRGTRWDGQFQIVTLDEIIDFVAAESAATGRTIGLIPEIKH
PSYFKALGLPMEDKMLATLQAHAYTRTAPVIIQSFETGNLRYLRDKIGRTSNIGLLQLLGGAQMALPAGTDDAPKTYGQM
ITPDGLKQVATYADAIGPDIRSIIPLDAQQRLGAPTSLVHDAHAAGLQVQPYTFRPENYFLAANNRSSGAVTERNDAGAL
VELQAYLDAGIDAFFADDPGLARRALSGRPAR

Sequences:

>Translated_352_residues
MVGMNGPAVAEAPLAKTVQIFAHRGASALRPEHTLASYAKAIVDGADFVEPDLVSTKDGVLIARHENEIGGTTDVASHPE
FAARKTRKTIDGQAMEGWFTEDFTLAELKTLRARERLPQLRGTRWDGQFQIVTLDEIIDFVAAESAATGRTIGLIPEIKH
PSYFKALGLPMEDKMLATLQAHAYTRTAPVIIQSFETGNLRYLRDKIGRTSNIGLLQLLGGAQMALPAGTDDAPKTYGQM
ITPDGLKQVATYADAIGPDIRSIIPLDAQQRLGAPTSLVHDAHAAGLQVQPYTFRPENYFLAANNRSSGAVTERNDAGAL
VELQAYLDAGIDAFFADDPGLARRALSGRPAR
>Mature_352_residues
MVGMNGPAVAEAPLAKTVQIFAHRGASALRPEHTLASYAKAIVDGADFVEPDLVSTKDGVLIARHENEIGGTTDVASHPE
FAARKTRKTIDGQAMEGWFTEDFTLAELKTLRARERLPQLRGTRWDGQFQIVTLDEIIDFVAAESAATGRTIGLIPEIKH
PSYFKALGLPMEDKMLATLQAHAYTRTAPVIIQSFETGNLRYLRDKIGRTSNIGLLQLLGGAQMALPAGTDDAPKTYGQM
ITPDGLKQVATYADAIGPDIRSIIPLDAQQRLGAPTSLVHDAHAAGLQVQPYTFRPENYFLAANNRSSGAVTERNDAGAL
VELQAYLDAGIDAFFADDPGLARRALSGRPAR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=348, Percent_Identity=32.7586206896552, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 37973; Mature: 37973

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGMNGPAVAEAPLAKTVQIFAHRGASALRPEHTLASYAKAIVDGADFVEPDLVSTKDGV
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
LIARHENEIGGTTDVASHPEFAARKTRKTIDGQAMEGWFTEDFTLAELKTLRARERLPQL
EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
RGTRWDGQFQIVTLDEIIDFVAAESAATGRTIGLIPEIKHPSYFKALGLPMEDKMLATLQ
CCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHH
AHAYTRTAPVIIQSFETGNLRYLRDKIGRTSNIGLLQLLGGAQMALPAGTDDAPKTYGQM
HHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCHHEECCCCCEEECCCCCCCCHHHCCC
ITPDGLKQVATYADAIGPDIRSIIPLDAQQRLGAPTSLVHDAHAAGLQVQPYTFRPENYF
CCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCHHHHHHHHHCCEEECCEEECCCCEE
LAANNRSSGAVTERNDAGALVELQAYLDAGIDAFFADDPGLARRALSGRPAR
EEECCCCCCCEEECCCCCCEEEEHHHHHCCCEEEECCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MVGMNGPAVAEAPLAKTVQIFAHRGASALRPEHTLASYAKAIVDGADFVEPDLVSTKDGV
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
LIARHENEIGGTTDVASHPEFAARKTRKTIDGQAMEGWFTEDFTLAELKTLRARERLPQL
EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
RGTRWDGQFQIVTLDEIIDFVAAESAATGRTIGLIPEIKHPSYFKALGLPMEDKMLATLQ
CCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHH
AHAYTRTAPVIIQSFETGNLRYLRDKIGRTSNIGLLQLLGGAQMALPAGTDDAPKTYGQM
HHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCHHEECCCCCEEECCCCCCCCHHHCCC
ITPDGLKQVATYADAIGPDIRSIIPLDAQQRLGAPTSLVHDAHAAGLQVQPYTFRPENYF
CCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCHHHHHHHHHCCEEECCEEECCCCEE
LAANNRSSGAVTERNDAGALVELQAYLDAGIDAFFADDPGLARRALSGRPAR
EEECCCCCCCEEECCCCCCEEEEHHHHHCCCEEEECCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]