| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78050031
Identifier: 78050031
GI number: 78050031
Start: 5162566
End: 5162886
Strand: Reverse
Name: 78050031
Synonym: XCV4475
Alternate gene names: NA
Gene position: 5162886-5162566 (Counterclockwise)
Preceding gene: 78050032
Following gene: 78050030
Centisome position: 99.7
GC content: 65.42
Gene sequence:
>321_bases ATGACCTCCAGCGACGAAGACGAACGCAAGGCCCTGCGCCGCTTGCTGCGGCAGATCGAGCGGCCCAATGCCAGCCTGCT GGCCAGCAACTGGCCGGTGTTCGGCGTCTGGCTGCTGTTTTCCGGGGCTTTCATGTATCTGTTCCAGACTGGCGACGGTT CGCCGCTGCACCCGTTGCTGCTGGCGCTGGGCTCGACCTGTCTGGGCGTGTTCGGTGCGTGGATCGTGTTCCGTTCGGTG TGGGCGCGGCAGTGGCCGCATGTGCGCGAACACATCGATGTGGACAGCGTGCGCGCGCGTCTGGCAGAACTGGACGACTG A
Upstream 100 bases:
>100_bases GACGCCCGCTGCCGTGTGGCAGGCAGCGTCTTTCGCGGCGCGATGCCATCGCCGGCCAGCAGTAGGTCAACGCAGACATG CAACCAGGAGCCGGCAGCCG
Downstream 100 bases:
>100_bases GCGATACAGCGCGCGAGGCGGTTTGCTCGCGCTGCCAGGCAGATCAAACCGATCTGCAACGACGAGCGGCCGCCCGCGCC GTGGTTGCCGGCATGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTSSDEDERKALRRLLRQIERPNASLLASNWPVFGVWLLFSGAFMYLFQTGDGSPLHPLLLALGSTCLGVFGAWIVFRSV WARQWPHVREHIDVDSVRARLAELDD
Sequences:
>Translated_106_residues MTSSDEDERKALRRLLRQIERPNASLLASNWPVFGVWLLFSGAFMYLFQTGDGSPLHPLLLALGSTCLGVFGAWIVFRSV WARQWPHVREHIDVDSVRARLAELDD >Mature_105_residues TSSDEDERKALRRLLRQIERPNASLLASNWPVFGVWLLFSGAFMYLFQTGDGSPLHPLLLALGSTCLGVFGAWIVFRSVW ARQWPHVREHIDVDSVRARLAELDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12081; Mature: 11950
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSDEDERKALRRLLRQIERPNASLLASNWPVFGVWLLFSGAFMYLFQTGDGSPLHPLL CCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH LALGSTCLGVFGAWIVFRSVWARQWPHVREHIDVDSVRARLAELDD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure TSSDEDERKALRRLLRQIERPNASLLASNWPVFGVWLLFSGAFMYLFQTGDGSPLHPLL CCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH LALGSTCLGVFGAWIVFRSVWARQWPHVREHIDVDSVRARLAELDD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA