Click here to switch to the map view.

The map label for this gene is 78049956

Identifier: 78049956

GI number: 78049956

Start: 5074832

End: 5075533

Strand: Reverse

Name: 78049956

Synonym: XCV4400

Alternate gene names: NA

Gene position: 5075533-5074832 (Counterclockwise)

Preceding gene: 78049957

Following gene: 78049955

Centisome position: 98.01

GC content: 67.09

Gene sequence:

>702_bases
ATGAACTGGTCTGAGGACGCCGGCCCGGACGCCGACGAGAGCACCGCGGTGTCGGCCATCGACGACCGCATGCCGATGAC
GCAAGCCTCCAGTGCCGAGCCGCGCGGCGAGCTGTTTTTAGGCGACACCGGCACGCTGCCGTTCGACGCGCGGCGTGCGC
TGTGCCAGTTGCTGGCAGGGCCCAGCATCGATGCGCAACGGCACGGTGCGCTGTGGCCGGCGTTGTTGCGCAACGAGGTG
GCGATCCGCCAGGTGCTGTGCGAGCTGTTTCTGGAGCTGGTGCTCGACCGCGAGGGCGGGGTGGCCTTCACCCGCCAGGC
CGACACCGCCGAGCTCGAATCGCCCACCTTGCTGCGCAGCGCGCCGCTGACGTTCATCGAGTCGGTGTTGCTGCTGTTCC
TGCGCCAGCAACTGGCCGAGGCCGATACGCGCGGCGAGCGTGCGGTGGTGGACGAAGCGCAGTTGGTGGAGGCGTTGTCG
GTCTACGAGAAGAACGTGTCCACCGATCGGGCGGGCTTCGCGCGGCGGGTGATGACGGCCATCGGCAAGATGCGCGACAA
CCAGTTGCTGTCGCGTTTGCGCGGCAGCGAGGAGCGCTATGAAGTCTCGCCGGTGCTGAAGCTGTTGTTCTCGGCAGAGG
ATGTGCAGGCCTTGGTGGTCGCGTATCGCGGTTTGCGGGAAGGGGATGTAGCTGCTGAGTAA

Upstream 100 bases:

>100_bases
GTGATCGAAGGACAGATGGAAACGGTGCAATGGGAAGGCAGCGACGGCGCCGTGCGGCGCGCGCGCATTCCCTTGGTGTG
GTTTACCCGGGAGAAACGCA

Downstream 100 bases:

>100_bases
TTTTCCTTCTCCCGCGCCGGCGCGCCGGCTTCCGTTCTCGCGTCGGGACATTGTCCTCCTTCATCGGGAAGAAGCTGCCC
GCAGGGCGGATGAGGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNWSEDAGPDADESTAVSAIDDRMPMTQASSAEPRGELFLGDTGTLPFDARRALCQLLAGPSIDAQRHGALWPALLRNEV
AIRQVLCELFLELVLDREGGVAFTRQADTAELESPTLLRSAPLTFIESVLLLFLRQQLAEADTRGERAVVDEAQLVEALS
VYEKNVSTDRAGFARRVMTAIGKMRDNQLLSRLRGSEERYEVSPVLKLLFSAEDVQALVVAYRGLREGDVAAE

Sequences:

>Translated_233_residues
MNWSEDAGPDADESTAVSAIDDRMPMTQASSAEPRGELFLGDTGTLPFDARRALCQLLAGPSIDAQRHGALWPALLRNEV
AIRQVLCELFLELVLDREGGVAFTRQADTAELESPTLLRSAPLTFIESVLLLFLRQQLAEADTRGERAVVDEAQLVEALS
VYEKNVSTDRAGFARRVMTAIGKMRDNQLLSRLRGSEERYEVSPVLKLLFSAEDVQALVVAYRGLREGDVAAE
>Mature_233_residues
MNWSEDAGPDADESTAVSAIDDRMPMTQASSAEPRGELFLGDTGTLPFDARRALCQLLAGPSIDAQRHGALWPALLRNEV
AIRQVLCELFLELVLDREGGVAFTRQADTAELESPTLLRSAPLTFIESVLLLFLRQQLAEADTRGERAVVDEAQLVEALS
VYEKNVSTDRAGFARRVMTAIGKMRDNQLLSRLRGSEERYEVSPVLKLLFSAEDVQALVVAYRGLREGDVAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25605; Mature: 25605

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWSEDAGPDADESTAVSAIDDRMPMTQASSAEPRGELFLGDTGTLPFDARRALCQLLAG
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCC
PSIDAQRHGALWPALLRNEVAIRQVLCELFLELVLDREGGVAFTRQADTAELESPTLLRS
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCHHHHH
APLTFIESVLLLFLRQQLAEADTRGERAVVDEAQLVEALSVYEKNVSTDRAGFARRVMTA
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IGKMRDNQLLSRLRGSEERYEVSPVLKLLFSAEDVQALVVAYRGLREGDVAAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNWSEDAGPDADESTAVSAIDDRMPMTQASSAEPRGELFLGDTGTLPFDARRALCQLLAG
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCC
PSIDAQRHGALWPALLRNEVAIRQVLCELFLELVLDREGGVAFTRQADTAELESPTLLRS
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCHHHHH
APLTFIESVLLLFLRQQLAEADTRGERAVVDEAQLVEALSVYEKNVSTDRAGFARRVMTA
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IGKMRDNQLLSRLRGSEERYEVSPVLKLLFSAEDVQALVVAYRGLREGDVAAE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA