| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is exuT [H]
Identifier: 78049917
GI number: 78049917
Start: 5014904
End: 5016217
Strand: Reverse
Name: exuT [H]
Synonym: XCV4361
Alternate gene names: 78049917
Gene position: 5016217-5014904 (Counterclockwise)
Preceding gene: 78049922
Following gene: 78049916
Centisome position: 96.87
GC content: 65.22
Gene sequence:
>1314_bases ATGAGCGAGGTGCCCGCCGCGGCCCCGGGGGCCGCAACGGCAAGGCTCGGCCGGGTGCGTTGGCGGGTCTGCGCCCTGCT GCTAGCCGCCACCACCATCAACTATGTGGACCGCCAGGTACTGGGCGTGCTGGCGCCGTTCCTGCAGACGCAGATCGGTT GGAACGAAATCCAGTACGGCTATATCGTCACCGCATTCCAGGCGGCGTATGCGCTGGGCTTGCTGTGCAGCGGTGCGGTG ATCGACCGCTTCGGCACTCGGCTCGGCTATGCGCTGGCGATCGGCCTGTGGAGCCTGGCGGCGATGGGGCATGCCTTGGC CACCAGCGTGGTGGGGTTTGCGATTGCGCGGTTTTTCCTGGGCCTTGGCGAATCGGGCAATTTTCCTGCAGCGCTCAAGA CGGTGGCCGAATGGTTCCCGCGCCGTGAGCGCGCGCTGGCCACCGGCATCTTCAATTCCGGCTCCAATATCGGGGCCATT GTTGCCCCATTGTTGGTGCCGTTGATTGCCACCGCCTGGGGCTGGCAGGCGGCATTCCTGTTCACCGGCGTGCTCAGTGC AACCTGGTTGGCGGTGTGGTGGTTCAGCTATCACCCGCCCGAGCAACAACCCCGGTTGTCTGCTGCAGAACTGGCGCACA TCCGCAGCGATGCGCATGAGCCGGTGCAGCGCCGGCTGTCGTGGCTACAGGTGCTTCGGCATCGGCAAGCCTGGGCGTTT GTGCTGGGCAAGTTCATCACCGACCCGATCTGGTGGTTCTTCCTGTTCTGGCTGCCGAAGTTCCTGCACGCCGAATATGG CCTGAGTCTGCTGCAATTGGGCGTGCCCTTGATCGTGATCTTCGTGCTGGCCGACATCGGCAGCATTGCCGGTGGTTGGG TGGCCGGGCGTTTCATCGCACGTGGCTGGAGCGTCAACCGCGCACGCAAGACCGCGATGCTGATCTGCGCGATTTCCGTC GTGCCCATCGTCTTTGCCGCACGCGCCGACAACCTGTGGCTGGCGGTCGCGCTGATCGGGCTGGCCACCGCCGCCCATCA GGGCTGGTCGGCGAATCTGTTTACGCTGCCTTCGGACATGTTTCCGCGCCACGCGGTTGCCACGGTGGTGGGCATCGGCG GTTTTGCCGGTGCGGTGGGCGGCATGCTGATCGCCACCTTCATCGGCTTTCTGTTGCAAGCCACCGGCAGCTATGTGCCG GTGTTTCTGATGGCAGGCTCTGCCTATCTGCTGGCCTTGGCCGTCGTGCACACGCTGGTGCCGCGGCTGGAGCCGGCGCA GTTGCCTGCCGATCCAGCGCCGACATCGTCCTGA
Upstream 100 bases:
>100_bases GCGACGGACCCGATCGGCACCTGATGGGTGCACGCTTGCAGGACATCGGCCAATCCGCGCAGGAAGCCGGCGCGCTGGCG CGCCCGCATAGGCCACGCGC
Downstream 100 bases:
>100_bases GGTGAGCCTATGCACAAGCGCGCAGTAGCACTGGGGTTATTGATGGTGGCCGGCATGGCCGCGCCAACCCACGCGGCACC GCTGGCAGCGGCGGCGTCCA
Product: anion:cation symporter family protein
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSEVPAAAPGAATARLGRVRWRVCALLLAATTINYVDRQVLGVLAPFLQTQIGWNEIQYGYIVTAFQAAYALGLLCSGAV IDRFGTRLGYALAIGLWSLAAMGHALATSVVGFAIARFFLGLGESGNFPAALKTVAEWFPRRERALATGIFNSGSNIGAI VAPLLVPLIATAWGWQAAFLFTGVLSATWLAVWWFSYHPPEQQPRLSAAELAHIRSDAHEPVQRRLSWLQVLRHRQAWAF VLGKFITDPIWWFFLFWLPKFLHAEYGLSLLQLGVPLIVIFVLADIGSIAGGWVAGRFIARGWSVNRARKTAMLICAISV VPIVFAARADNLWLAVALIGLATAAHQGWSANLFTLPSDMFPRHAVATVVGIGGFAGAVGGMLIATFIGFLLQATGSYVP VFLMAGSAYLLALAVVHTLVPRLEPAQLPADPAPTSS
Sequences:
>Translated_437_residues MSEVPAAAPGAATARLGRVRWRVCALLLAATTINYVDRQVLGVLAPFLQTQIGWNEIQYGYIVTAFQAAYALGLLCSGAV IDRFGTRLGYALAIGLWSLAAMGHALATSVVGFAIARFFLGLGESGNFPAALKTVAEWFPRRERALATGIFNSGSNIGAI VAPLLVPLIATAWGWQAAFLFTGVLSATWLAVWWFSYHPPEQQPRLSAAELAHIRSDAHEPVQRRLSWLQVLRHRQAWAF VLGKFITDPIWWFFLFWLPKFLHAEYGLSLLQLGVPLIVIFVLADIGSIAGGWVAGRFIARGWSVNRARKTAMLICAISV VPIVFAARADNLWLAVALIGLATAAHQGWSANLFTLPSDMFPRHAVATVVGIGGFAGAVGGMLIATFIGFLLQATGSYVP VFLMAGSAYLLALAVVHTLVPRLEPAQLPADPAPTSS >Mature_436_residues SEVPAAAPGAATARLGRVRWRVCALLLAATTINYVDRQVLGVLAPFLQTQIGWNEIQYGYIVTAFQAAYALGLLCSGAVI DRFGTRLGYALAIGLWSLAAMGHALATSVVGFAIARFFLGLGESGNFPAALKTVAEWFPRRERALATGIFNSGSNIGAIV APLLVPLIATAWGWQAAFLFTGVLSATWLAVWWFSYHPPEQQPRLSAAELAHIRSDAHEPVQRRLSWLQVLRHRQAWAFV LGKFITDPIWWFFLFWLPKFLHAEYGLSLLQLGVPLIVIFVLADIGSIAGGWVAGRFIARGWSVNRARKTAMLICAISVV PIVFAARADNLWLAVALIGLATAAHQGWSANLFTLPSDMFPRHAVATVVGIGGFAGAVGGMLIATFIGFLLQATGSYVPV FLMAGSAYLLALAVVHTLVPRLEPAQLPADPAPTSS
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI154350196, Length=381, Percent_Identity=25.4593175853018, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI21322234, Length=407, Percent_Identity=23.0958230958231, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI6912666, Length=342, Percent_Identity=24.2690058479532, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI148743791, Length=329, Percent_Identity=22.4924012158055, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI2367193, Length=430, Percent_Identity=33.953488372093, Blast_Score=209, Evalue=3e-55, Organism=Escherichia coli, GI87082320, Length=396, Percent_Identity=30.5555555555556, Blast_Score=185, Evalue=4e-48, Organism=Escherichia coli, GI1789515, Length=431, Percent_Identity=28.3062645011601, Blast_Score=168, Evalue=6e-43, Organism=Escherichia coli, GI1789152, Length=448, Percent_Identity=26.1160714285714, Blast_Score=161, Evalue=8e-41, Organism=Escherichia coli, GI2367379, Length=414, Percent_Identity=26.0869565217391, Blast_Score=151, Evalue=9e-38, Organism=Escherichia coli, GI87082231, Length=223, Percent_Identity=26.9058295964126, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87082404, Length=347, Percent_Identity=24.4956772334294, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87082071, Length=420, Percent_Identity=23.5714285714286, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115533556, Length=399, Percent_Identity=25.5639097744361, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115533554, Length=399, Percent_Identity=25.5639097744361, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17535049, Length=450, Percent_Identity=21.7777777777778, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17552542, Length=290, Percent_Identity=28.9655172413793, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI32565914, Length=382, Percent_Identity=22.2513089005236, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71991448, Length=405, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71991453, Length=405, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32565916, Length=247, Percent_Identity=25.5060728744939, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17560030, Length=216, Percent_Identity=23.6111111111111, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193205400, Length=235, Percent_Identity=25.1063829787234, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17566884, Length=198, Percent_Identity=24.7474747474747, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24583789, Length=397, Percent_Identity=24.4332493702771, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24584153, Length=393, Percent_Identity=22.9007633587786, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19920686, Length=388, Percent_Identity=22.1649484536082, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24648416, Length=368, Percent_Identity=24.1847826086957, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI21356189, Length=368, Percent_Identity=24.1847826086957, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24580790, Length=295, Percent_Identity=23.728813559322, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24639764, Length=336, Percent_Identity=25.8928571428571, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641682, Length=386, Percent_Identity=22.7979274611399, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI62484226, Length=341, Percent_Identity=24.3401759530792, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI28573708, Length=384, Percent_Identity=24.21875, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573707, Length=384, Percent_Identity=24.21875, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573299, Length=241, Percent_Identity=25.7261410788382, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47028; Mature: 46896
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVPAAAPGAATARLGRVRWRVCALLLAATTINYVDRQVLGVLAPFLQTQIGWNEIQYG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH YIVTAFQAAYALGLLCSGAVIDRFGTRLGYALAIGLWSLAAMGHALATSVVGFAIARFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGESGNFPAALKTVAEWFPRRERALATGIFNSGSNIGAIVAPLLVPLIATAWGWQAAFL HCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH FTGVLSATWLAVWWFSYHPPEQQPRLSAAELAHIRSDAHEPVQRRLSWLQVLRHRQAWAF HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLGKFITDPIWWFFLFWLPKFLHAEYGLSLLQLGVPLIVIFVLADIGSIAGGWVAGRFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGWSVNRARKTAMLICAISVVPIVFAARADNLWLAVALIGLATAAHQGWSANLFTLPSDM CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHH FPRHAVATVVGIGGFAGAVGGMLIATFIGFLLQATGSYVPVFLMAGSAYLLALAVVHTLV CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH PRLEPAQLPADPAPTSS CCCCCCCCCCCCCCCCC >Mature Secondary Structure SEVPAAAPGAATARLGRVRWRVCALLLAATTINYVDRQVLGVLAPFLQTQIGWNEIQYG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH YIVTAFQAAYALGLLCSGAVIDRFGTRLGYALAIGLWSLAAMGHALATSVVGFAIARFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGESGNFPAALKTVAEWFPRRERALATGIFNSGSNIGAIVAPLLVPLIATAWGWQAAFL HCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH FTGVLSATWLAVWWFSYHPPEQQPRLSAAELAHIRSDAHEPVQRRLSWLQVLRHRQAWAF HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLGKFITDPIWWFFLFWLPKFLHAEYGLSLLQLGVPLIVIFVLADIGSIAGGWVAGRFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGWSVNRARKTAMLICAISVVPIVFAARADNLWLAVALIGLATAAHQGWSANLFTLPSDM CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHH FPRHAVATVVGIGGFAGAVGGMLIATFIGFLLQATGSYVPVFLMAGSAYLLALAVVHTLV CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH PRLEPAQLPADPAPTSS CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]