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The map label for this gene is xylB4 [H]

Identifier: 78049906

GI number: 78049906

Start: 5002031

End: 5003677

Strand: Reverse

Name: xylB4 [H]

Synonym: XCV4350

Alternate gene names: 78049906

Gene position: 5003677-5002031 (Counterclockwise)

Preceding gene: 78049907

Following gene: 78049905

Centisome position: 96.62

GC content: 68.91

Gene sequence:

>1647_bases
ATGCGCACCCAAACGCTCGCAGACGACACCGGCGGCAATGCGCCGCTGGTGCTGGCGGTGGACCTGGGAACCTCTGGCTG
CAAATGCGCGTTGGTGACGCTGGACGGCAAGGTGCTCGCCTGGGCGTTCGAACCGGTGCAACTGCACGTGCAGGGCGTCG
CTGCCGAACAAGACCCGCACGCGTGGTGGGACGCGTTCAGCGCCACCGCCGCTGCCGTGGTGCAGGGCGATGCGGCACTG
CGCCGACGCGTGGTGGCCGTGTGTTGCTCGACCCAGGGCGAAGGCACCGTCTGCGTGGACCATAACGGCCAGGCGCTCGG
GCGCGCCATGCTGTGGCTGGACATGCGCGGCCAGGCGGCCATCGCCCGGCGTCTGCAGGGGCGTTGGCTCAATGTGCGCG
GCTACGATCCCCTGCGCCTGTGGCGATGGTTGCGCCTGAGCGGTGGCGCGCCTGCGCGCAGCGGCAAGGATTGCGCCGGC
CACATCGCCTATCTGCGCGATCACCAGCCCGTGCGTTACCAGCGCACGCACAAGTTTCTCAACGTGCTCGATTACATGAA
CCTGCGCCTGACCGGCCGGTTCTGCGCCACTCCCGATTCGATGCTGACCACCTGGGTCACCGACAATCGCGACCCGCACC
ATATTCGCTACGACGCGGGCCTGCTGGACATGGTCGGCGTGGAGCGCGACAAGTTGCCGGACCTGGTGCCGTCCACTGCC
GTGCTGGGTCCGCTGCTGCCGCAGGTGGCCCAGGCGCTGGGCCTGTCGCCGCAGACCGTGGTGGTGGCCGGCGCGATCGA
CACGTCGGCCGTGGCGGTCGCCGCGGCGGTGGAAGACCACGCCGCGCACCTGTACCTGGGCACCTCGTCGTGGTTGGGCG
CGCATGTGCCGCGCATGAAAACCGACGTGCGCAGTACGATCGCCGCGGTGCCGTGCGCGGTGGAAGGGCGCTATCTGGCG
ATCGCCCTGCAGACCACCGCCGGTGCCAACCTGTCCTTCCTGCGCGACCGCATCCTGTTCCATGCCGACGAACTGCTCAG
CGACGAGCAGCGCCCGGACGTCTATGAAGTGCTCAATCGCATCGCCGCACGCGTGCCCGCAGGGTCCAACGGGTTGATCT
ACATGCCCTGGCTGTTCGGCGAACGCACGCCGGTGGAAGACCCGAGCCTGCGTGCGGGCCTGATCAATCTCTCGTTGATG
CACAGCCGCGAGGACATGATCCGCGCGGTGATGGAAGGGGTGGCGTTCAACACGCGCTGGATGATGGAGCCGTTCGCGCG
CCTGCTTGGCTGCGACCCAGGCACGATTGCCGCGGTCGGTGGCGGCGCGCAGTCGGATCTGTGGTGCCAGATCATCGCCG
ATGTCAGCGGCCGGCCGATCCGGCAATTGCACAATCCGATCCAGGCCAACGCAGTGGGCGCGGCCTTCATCGCCGGGGTC
GGCCTGGGCCGGCTCGGCTTCGGCGACCTGGCGGCATTGCAGCGCCCCCGGCGGGTCTACGAGCCGGATGCGGGCACGCG
TGCGCTGTACGACGACCGCTACGCGGTGTTCAAGGACCTGCAGCGCACCTTGGCGCCGATCTACCGACGGCTCAATCCCT
CCACGCCTGCGCCCGCCCCGGAGGTCGCCACGCATGTTTGCCCTTGA

Upstream 100 bases:

>100_bases
CCAACACCAACGCGCACCAGTTGTACTGGGTGCAGGACGGCGAGCGTATCCGCAAGACCGACGGCGATGCGCTGGTGTTC
TCGATCGGCTACACGTTCTG

Downstream 100 bases:

>100_bases
ACAACGCCAGCGCGTGGTCGCGCTGTGCATCGAACTGTCGCGCCGCGGCTATCTGGCCGGCACCGGCGGCAATGTCGCCT
TGCGTATCGATGCCGAGTGT

Product: xylulose kinase

Products: ADP; D-xylulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MRTQTLADDTGGNAPLVLAVDLGTSGCKCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPHAWWDAFSATAAAVVQGDAAL
RRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAAIARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAG
HIAYLRDHQPVRYQRTHKFLNVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLVPSTA
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMKTDVRSTIAAVPCAVEGRYLA
IALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNRIAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLM
HSREDMIRAVMEGVAFNTRWMMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTPAPAPEVATHVCP

Sequences:

>Translated_548_residues
MRTQTLADDTGGNAPLVLAVDLGTSGCKCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPHAWWDAFSATAAAVVQGDAAL
RRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAAIARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAG
HIAYLRDHQPVRYQRTHKFLNVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLVPSTA
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMKTDVRSTIAAVPCAVEGRYLA
IALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNRIAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLM
HSREDMIRAVMEGVAFNTRWMMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTPAPAPEVATHVCP
>Mature_548_residues
MRTQTLADDTGGNAPLVLAVDLGTSGCKCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPHAWWDAFSATAAAVVQGDAAL
RRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAAIARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAG
HIAYLRDHQPVRYQRTHKFLNVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLVPSTA
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMKTDVRSTIAAVPCAVEGRYLA
IALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNRIAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLM
HSREDMIRAVMEGVAFNTRWMMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTPAPAPEVATHVCP

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789987, Length=521, Percent_Identity=25.9117082533589, Blast_Score=135, Evalue=9e-33,
Organism=Escherichia coli, GI1790005, Length=531, Percent_Identity=25.6120527306968, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1787789, Length=378, Percent_Identity=29.1005291005291, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1789138, Length=361, Percent_Identity=27.1468144044321, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790361, Length=524, Percent_Identity=22.5190839694656, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789168, Length=488, Percent_Identity=21.3114754098361, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.17

Molecular weight: Translated: 59481; Mature: 59481

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS00297 HSP70_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQTLADDTGGNAPLVLAVDLGTSGCKCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPH
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEECCEEEEEEEECCCCCCH
AWWDAFSATAAAVVQGDAALRRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCEEEEECCCCHHHCEEEEEEECCCHHH
IARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAGHIAYLRDHQPVRYQRTHKFL
HHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
NVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLVPSTA
HHHHHCCEEEEEEEECCCHHHEEEEECCCCCCCEEEECCCCHHHHCCCHHCCCCCCCCHH
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMK
HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCHHH
TDVRSTIAAVPCAVEGRYLAIALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNR
HHHHHHHHHCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLMHSREDMIRAVMEGVAFNTRW
HHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHH
MMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
HHHHHHHHHCCCCCCEEEECCCCCCCHHEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHC
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTPAPAP
CCCCCCCHHHHHHHCCCHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EVATHVCP
HHHHCCCC
>Mature Secondary Structure
MRTQTLADDTGGNAPLVLAVDLGTSGCKCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPH
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEEEEECCEEEEEEEECCCCCCH
AWWDAFSATAAAVVQGDAALRRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCEEEEECCCCHHHCEEEEEEECCCHHH
IARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAGHIAYLRDHQPVRYQRTHKFL
HHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
NVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLVPSTA
HHHHHCCEEEEEEEECCCHHHEEEEECCCCCCCEEEECCCCHHHHCCCHHCCCCCCCCHH
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMK
HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCHHH
TDVRSTIAAVPCAVEGRYLAIALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNR
HHHHHHHHHCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLMHSREDMIRAVMEGVAFNTRW
HHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHH
MMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
HHHHHHHHHCCCCCCEEEECCCCCCCHHEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHC
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTPAPAP
CCCCCCCHHHHHHHCCCHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
EVATHVCP
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-xylulose

Specific reaction: ATP + D-xylulose = ADP + D-xylulose 5-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA