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The map label for this gene is 78049900

Identifier: 78049900

GI number: 78049900

Start: 4995543

End: 4996460

Strand: Reverse

Name: 78049900

Synonym: XCV4344

Alternate gene names: NA

Gene position: 4996460-4995543 (Counterclockwise)

Preceding gene: 78049901

Following gene: 78049898

Centisome position: 96.49

GC content: 67.54

Gene sequence:

>918_bases
GTGGCTCTGGCAAACACCGGCCGTGCAGGCGCATGGCTTGGCGGTGGCATGGCGCTACTGCAGACGATGGACGCCGCCTG
GCCGGCGCAATGCAGCAGCGACGCAACGGCGCAGGTGCAGTCGCGGTGGTCTGGCCGACGCATCACTCCGTGTTCGAGGA
ATCCCCCGCCCATGTCCACGACCAAGTCCCGTCCGCGCGCGCCGCTCAAGGCGCCTGCGCCCAGGCTGACCGGCAACAAG
CTCCCGGCCCAGCATCGCGCGACCGAGACCTACGAACATATCCTGGCGGTGACCGCGCAATTGCTCGGCGATGTCGGCGT
GGAACGGCTGTCCACCAATCTGGTCTGTGCGCATGCCGGACTGACGCCACCGGCGCTGTACCGCTACTTTCCCAACAAAT
ATGCCTTGTTGTCCGAGCTCGGCACGCGCCTGATGCAGCGGCAGAACGCGCTGGTGCCCAAGTGGATCACGCCGCAGGCG
ATGTCCGGTTCGCGCGAACAGGTGCAGCAGGCGCTGACCGGCTTGGTGCTGGAGACCTACCGGGTGACCAAGGCCACCGA
GGGCGGTGTCTGGATCCTGCGCGCGCTGCGTGCGGTGCCGGCCTTGCAGCAGGTGCGCCTGGACTCGCACGCGCAGGTCA
CCAAGGCGCAGGTGCGCATGCTCGCCGAATTCTTCCCCGATGCAGACCCGCGCCAACTGCGTCTGGTCAGCCGCATCGTG
GTGGACCTGATCTATGCGACCGTGGAGCTGCTGTTCGATGTGCGACTGAGCAGCCGTGCGGTGGCCGAGACAGTCGGCAC
GATGATCGCCGGCCACGTCGAGCAGTTGCGCGATGCAACGGCCGATGTGCCGAAAGGCAGCGCTGTGGAGCGCCGGCGAG
GTTCGCCACCGGCACGGCGTTCAAACCGCGCTGGGTGA

Upstream 100 bases:

>100_bases
TATCGGGGCTGGCAGCACCGCGTGGCCACCGCATTGACCGCCTGGCTGGCCCGCCGATGACGCGCGCGGCACAGATCGCC
CGCGACGCAGCGCGTATGAT

Downstream 100 bases:

>100_bases
TGGGCCGGCAGCGGGCGCGGTCGTCAGAGCCTGCGAAGGACGCGCCTTCCCTGCACCGAGGCATCTGGCAGGTGCAATGC
GGCTGCTCGCAGGCGCTGAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MALANTGRAGAWLGGGMALLQTMDAAWPAQCSSDATAQVQSRWSGRRITPCSRNPPPMSTTKSRPRAPLKAPAPRLTGNK
LPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAGLTPPALYRYFPNKYALLSELGTRLMQRQNALVPKWITPQA
MSGSREQVQQALTGLVLETYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQVRMLAEFFPDADPRQLRLVSRIV
VDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVERRRGSPPARRSNRAG

Sequences:

>Translated_305_residues
MALANTGRAGAWLGGGMALLQTMDAAWPAQCSSDATAQVQSRWSGRRITPCSRNPPPMSTTKSRPRAPLKAPAPRLTGNK
LPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAGLTPPALYRYFPNKYALLSELGTRLMQRQNALVPKWITPQA
MSGSREQVQQALTGLVLETYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQVRMLAEFFPDADPRQLRLVSRIV
VDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVERRRGSPPARRSNRAG
>Mature_304_residues
ALANTGRAGAWLGGGMALLQTMDAAWPAQCSSDATAQVQSRWSGRRITPCSRNPPPMSTTKSRPRAPLKAPAPRLTGNKL
PAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAGLTPPALYRYFPNKYALLSELGTRLMQRQNALVPKWITPQAM
SGSREQVQQALTGLVLETYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQVRMLAEFFPDADPRQLRLVSRIVV
DLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVERRRGSPPARRSNRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33241; Mature: 33110

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALANTGRAGAWLGGGMALLQTMDAAWPAQCSSDATAQVQSRWSGRRITPCSRNPPPMST
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
TKSRPRAPLKAPAPRLTGNKLPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
LTPPALYRYFPNKYALLSELGTRLMQRQNALVPKWITPQAMSGSREQVQQALTGLVLETY
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
RVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQVRMLAEFFPDADPRQLRLVSRIV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVERRRGSPPARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
SNRAG
CCCCC
>Mature Secondary Structure 
ALANTGRAGAWLGGGMALLQTMDAAWPAQCSSDATAQVQSRWSGRRITPCSRNPPPMST
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
TKSRPRAPLKAPAPRLTGNKLPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
LTPPALYRYFPNKYALLSELGTRLMQRQNALVPKWITPQAMSGSREQVQQALTGLVLETY
CCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
RVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQVRMLAEFFPDADPRQLRLVSRIV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVERRRGSPPARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCC
SNRAG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA