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The map label for this gene is 78049871

Identifier: 78049871

GI number: 78049871

Start: 4964392

End: 4966236

Strand: Reverse

Name: 78049871

Synonym: XCV4315

Alternate gene names: NA

Gene position: 4966236-4964392 (Counterclockwise)

Preceding gene: 78049872

Following gene: 78049870

Centisome position: 95.9

GC content: 63.85

Gene sequence:

>1845_bases
TTGAAGAAGTCGCTCGCGGGCAGATTGACTAAATTTCCGGGCATGAAAACCCATGCCACCAATCCAACTGCGTTCCGCAC
AAACTCGCCCTACGCTCATGCCGAAAAGTCCGGGCTAACGGAGGATCAGTCAGCAGCCAGCAGCAGCGGCGCGCAGCAAC
CGCTTGGACGGCCGCCTAGAAAACGGCAGAGGATGGAGTCGGATGACCCAAGGGCCTCGACGCGCGACAGGCAGCCCTTT
ACGGCAAACGCCTTAAAGAAAGAGGAAATCGATGCCAGCGAAGGCGCATGGGACAGGCGCTTTCGGCCGTGGCAGCCGGC
TGCCGTCAAAAACGCGCGCATCAAAACCGAGGGCTACCCGGATAGGGCGACTGACGACGTCGGCACGTCGTCAGCGCAGC
ATCGGCCACAACGCTCGTCGCAGCATTATGGTGTGGAGGCAAGGGCATTTCGGCCGCGCGAACCACCGTTCGAATGGTCC
GCCAGAAAGCGACCACGTGAAGAGCAGGCGCCATCCCGGCAGCCAAAGCGGCCATTCCATGGCATGGGGCTGACGACCGA
GGATCTGCGTAGGGCCGAACATCAGCTGGACTGGGCGGCAAAAAAACGGCTACAGGCGCAGCGACAGCAACAGCAGCGAC
AGTTGAGCGAGCCCCACGGAATCGGGAGGAACCACAACGCGGGCCGGTGCGTGTCGATGGCATATGACAACGAGCTGGCG
CATCGCATGCGTGGCGGGATGGCGTTGCCCTTCCTGGAAGAGAGTGTCAACGCGCAAGTCAACGCGCAGCGGCTGGACAA
ATATCTTCAGTTGATTGCCACTGCACGGTGCGCCAGGGCAGGCGTGACGCCCGGCGATCTGGATCGTTGCACCGAGCTCG
CGGCGCAATACCTGTTTGGGACCGGATGGTTCGAAGGGGCATCGCTGGCGCAGCTGGCGCATCTGGGCAACAAGCTGAGC
AAGCACCCGAATCAGCCCGCATGCATGGAGGCAATCGCGTGGATCGCCGGAGAGCTCACGCAGGTTGACGATCTGGTGGG
GCTGGGAGGCTACCCGTCGGTTCTGCTTCTGAATGCCTTCTCGAAGAATCTCGACAGCGGCCGGTGTGAGCGCGCGGTGG
CGCGTCTGGCCCGTCATCTGCGACGTGACGACCACGCCCGGCAGACTCTGAATGCGCAGAACATCAGCCTGGCACTCAAT
GCCCTCAGCAAGTGGTCCGATAACCCAGAGTGCCAGGCGACGGCACACCGGTTTGCCGCGCTTGTCGCCAGCGACTATCG
CCTGCGTTGCGCCATGGATGCCCAGAGCGTGGCGACCGCGCTCAACGCCCTGTGCAAATGGCCCGACACGCCGGACTGCG
GGAATGCCGTCAGCGCGCTCGCCGAGCGGTTGGCCGACGAGTCCAGATTGCGCAAGGAACTGAAACCGCAAGAACTGGGA
AACGCGCTCAACGCCCTGAGCAAATGGGCCGACACCCCGGTCTGTGCAGCTGCCGCCAGTGCGCTGGCCGAACGGTTGGT
GGACGATCCCGGCTTGCGCAAGGCCCTGGACCCGATCAACGTGAGTCAGGCGCTTAACGCGCTGAGCAAATGGGCCGATA
TACCGGTGTGTGCGGCCGCCGCCAGCGCACTGGCCGAGCGGTTGGCCGACGACCCCAAGCTATGCCGGGCCCTGAATGCG
CGAGGCCTGTCCAATGCGCTCAACGCCCTGAGTAAATGGCCCGACAGCCAGGTCTGTGCGGTGGCCGTCAGTGCGCTGGC
CGAGCGGGTCGCCGACGACCCCGAGCTGCGCAAGGACCTGGACCCGCAGGGCGTGTCCAACGTGCTCAACGCGCTGAGCA
AATGA

Upstream 100 bases:

>100_bases
CGTGCCGGCGTGCTGCATCCCACGCGTTCGATCCATGCAATGTAGTAGGGCCATTGGCCCAACGCGCAGCGGGCGTCGCA
CACGTCGTCGGCGCTTCGTA

Downstream 100 bases:

>100_bases
CCCGACACCCCGGTCTGTGCCGCCGCCAGTGCGCTGGCCGAACGCGTGGTCGACGATCTCCAATTGCGCGAGGGTCTGGA
CGCGCAAGGTGTGGCCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: Shikimate Kinase; Type III Effector; Type III Effector Protein Skwp-Related

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MKKSLAGRLTKFPGMKTHATNPTAFRTNSPYAHAEKSGLTEDQSAASSSGAQQPLGRPPRKRQRMESDDPRASTRDRQPF
TANALKKEEIDASEGAWDRRFRPWQPAAVKNARIKTEGYPDRATDDVGTSSAQHRPQRSSQHYGVEARAFRPREPPFEWS
ARKRPREEQAPSRQPKRPFHGMGLTTEDLRRAEHQLDWAAKKRLQAQRQQQQRQLSEPHGIGRNHNAGRCVSMAYDNELA
HRMRGGMALPFLEESVNAQVNAQRLDKYLQLIATARCARAGVTPGDLDRCTELAAQYLFGTGWFEGASLAQLAHLGNKLS
KHPNQPACMEAIAWIAGELTQVDDLVGLGGYPSVLLLNAFSKNLDSGRCERAVARLARHLRRDDHARQTLNAQNISLALN
ALSKWSDNPECQATAHRFAALVASDYRLRCAMDAQSVATALNALCKWPDTPDCGNAVSALAERLADESRLRKELKPQELG
NALNALSKWADTPVCAAAASALAERLVDDPGLRKALDPINVSQALNALSKWADIPVCAAAASALAERLADDPKLCRALNA
RGLSNALNALSKWPDSQVCAVAVSALAERVADDPELRKDLDPQGVSNVLNALSK

Sequences:

>Translated_614_residues
MKKSLAGRLTKFPGMKTHATNPTAFRTNSPYAHAEKSGLTEDQSAASSSGAQQPLGRPPRKRQRMESDDPRASTRDRQPF
TANALKKEEIDASEGAWDRRFRPWQPAAVKNARIKTEGYPDRATDDVGTSSAQHRPQRSSQHYGVEARAFRPREPPFEWS
ARKRPREEQAPSRQPKRPFHGMGLTTEDLRRAEHQLDWAAKKRLQAQRQQQQRQLSEPHGIGRNHNAGRCVSMAYDNELA
HRMRGGMALPFLEESVNAQVNAQRLDKYLQLIATARCARAGVTPGDLDRCTELAAQYLFGTGWFEGASLAQLAHLGNKLS
KHPNQPACMEAIAWIAGELTQVDDLVGLGGYPSVLLLNAFSKNLDSGRCERAVARLARHLRRDDHARQTLNAQNISLALN
ALSKWSDNPECQATAHRFAALVASDYRLRCAMDAQSVATALNALCKWPDTPDCGNAVSALAERLADESRLRKELKPQELG
NALNALSKWADTPVCAAAASALAERLVDDPGLRKALDPINVSQALNALSKWADIPVCAAAASALAERLADDPKLCRALNA
RGLSNALNALSKWPDSQVCAVAVSALAERVADDPELRKDLDPQGVSNVLNALSK
>Mature_614_residues
MKKSLAGRLTKFPGMKTHATNPTAFRTNSPYAHAEKSGLTEDQSAASSSGAQQPLGRPPRKRQRMESDDPRASTRDRQPF
TANALKKEEIDASEGAWDRRFRPWQPAAVKNARIKTEGYPDRATDDVGTSSAQHRPQRSSQHYGVEARAFRPREPPFEWS
ARKRPREEQAPSRQPKRPFHGMGLTTEDLRRAEHQLDWAAKKRLQAQRQQQQRQLSEPHGIGRNHNAGRCVSMAYDNELA
HRMRGGMALPFLEESVNAQVNAQRLDKYLQLIATARCARAGVTPGDLDRCTELAAQYLFGTGWFEGASLAQLAHLGNKLS
KHPNQPACMEAIAWIAGELTQVDDLVGLGGYPSVLLLNAFSKNLDSGRCERAVARLARHLRRDDHARQTLNAQNISLALN
ALSKWSDNPECQATAHRFAALVASDYRLRCAMDAQSVATALNALCKWPDTPDCGNAVSALAERLADESRLRKELKPQELG
NALNALSKWADTPVCAAAASALAERLVDDPGLRKALDPINVSQALNALSKWADIPVCAAAASALAERLADDPKLCRALNA
RGLSNALNALSKWPDSQVCAVAVSALAERVADDPELRKDLDPQGVSNVLNALSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67305; Mature: 67305

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLAGRLTKFPGMKTHATNPTAFRTNSPYAHAEKSGLTEDQSAASSSGAQQPLGRPPR
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCH
KRQRMESDDPRASTRDRQPFTANALKKEEIDASEGAWDRRFRPWQPAAVKNARIKTEGYP
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCHHHCCCEEECCCCC
DRATDDVGTSSAQHRPQRSSQHYGVEARAFRPREPPFEWSARKRPREEQAPSRQPKRPFH
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCC
GMGLTTEDLRRAEHQLDWAAKKRLQAQRQQQQRQLSEPHGIGRNHNAGRCVSMAYDNELA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHH
HRMRGGMALPFLEESVNAQVNAQRLDKYLQLIATARCARAGVTPGDLDRCTELAAQYLFG
HHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TGWFEGASLAQLAHLGNKLSKHPNQPACMEAIAWIAGELTQVDDLVGLGGYPSVLLLNAF
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SKNLDSGRCERAVARLARHLRRDDHARQTLNAQNISLALNALSKWSDNPECQATAHRFAA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVASDYRLRCAMDAQSVATALNALCKWPDTPDCGNAVSALAERLADESRLRKELKPQELG
HHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
NALNALSKWADTPVCAAAASALAERLVDDPGLRKALDPINVSQALNALSKWADIPVCAAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
ASALAERLADDPKLCRALNARGLSNALNALSKWPDSQVCAVAVSALAERVADDPELRKDL
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCC
DPQGVSNVLNALSK
CHHHHHHHHHHHCC
>Mature Secondary Structure
MKKSLAGRLTKFPGMKTHATNPTAFRTNSPYAHAEKSGLTEDQSAASSSGAQQPLGRPPR
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCH
KRQRMESDDPRASTRDRQPFTANALKKEEIDASEGAWDRRFRPWQPAAVKNARIKTEGYP
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCHHHCCCEEECCCCC
DRATDDVGTSSAQHRPQRSSQHYGVEARAFRPREPPFEWSARKRPREEQAPSRQPKRPFH
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCC
GMGLTTEDLRRAEHQLDWAAKKRLQAQRQQQQRQLSEPHGIGRNHNAGRCVSMAYDNELA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHH
HRMRGGMALPFLEESVNAQVNAQRLDKYLQLIATARCARAGVTPGDLDRCTELAAQYLFG
HHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TGWFEGASLAQLAHLGNKLSKHPNQPACMEAIAWIAGELTQVDDLVGLGGYPSVLLLNAF
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SKNLDSGRCERAVARLARHLRRDDHARQTLNAQNISLALNALSKWSDNPECQATAHRFAA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LVASDYRLRCAMDAQSVATALNALCKWPDTPDCGNAVSALAERLADESRLRKELKPQELG
HHHHCCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
NALNALSKWADTPVCAAAASALAERLVDDPGLRKALDPINVSQALNALSKWADIPVCAAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
ASALAERLADDPKLCRALNARGLSNALNALSKWPDSQVCAVAVSALAERVADDPELRKDL
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCC
DPQGVSNVLNALSK
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA