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The map label for this gene is 78049798

Identifier: 78049798

GI number: 78049798

Start: 4871139

End: 4872632

Strand: Reverse

Name: 78049798

Synonym: XCV4242

Alternate gene names: NA

Gene position: 4872632-4871139 (Counterclockwise)

Preceding gene: 78049799

Following gene: 78049797

Centisome position: 94.09

GC content: 62.45

Gene sequence:

>1494_bases
ATGTCCGCGACCGAAGCCGCACTGGCCACCAGTAGCACCGAAACAACCGAACAGGGCGACTTTGCCGCGCTGCTCAATCG
CGAGTTCCGCCCCAAGAGCGAGCGCGCCAAGGAAGAAGTGGAATCGGCCGTGCGCACGCTGGCCGAGCAGGTGCTCAACC
GCAGCGATGTGGTCAGCGAAGACGTGTCGCAGACCATCAAGGCCTATATCGCCGAGATCGATCGCGCCCTCACCGAGCAG
CTCAACCACATCCTGCATCACGCCGATCTGCAGCAGCTCGAAGGCGCCTGGCGCGGCCTGCATTATCTGGTCAACAACAC
CGAGACCGACCAGCAGCTCAAGATCCGCGTGCTGAACATCAGCAAGAAGGAACTGGGCAAGGTGCTCAAGCGCTACAAGG
GCACCGCCTGGGACCAGAGCCCCATCTTCAAGAAGGTCTACGAGCAGGAATACGGCCAGCTCGGTGGCGAACCGTATGGC
TGCCTGGTCGGCGATTACTATTTCGACCAAAGCCCGCCGGATGTGGAACTGCTCAACGGCATGGCGCAGGTGGCTGCTGC
CGCGCATGCACCGTTCATTGCCGCGGCCGCGCCCAAGTTGATGGGCATGGACAACTGGAGCGAGCTCTCCAACCCGCGCG
ACCTGGCGAAGATTTTCTCCACGCCCGATTACGCCGCATGGCGCTCGCTGCGCGAATCGGAAGATTCCAAGTACATCGGC
CTGGCCATGCCGCGCACGCTGTCGCGTCTGCCTTACGGCGCGGCCACCAGCCCGGTGGATGAATTCGATTTCGAAGAAGA
CACTGCCGGCGCTGACTCGTCCAAGTACACCTGGCAGAACGCTGCCTATGCGATGGCAGTGAACATCAATCGCTCGTTCA
AGCAGTACGGCTGGTGCTCGCGCATTCGCGGTATCGAATCCGGCGGCGCAGTGGAAGGCTTGCCCACCCACACCTTTCCC
ACCGACGACGGTGGCGTGGACATGAAGTGCCCGACCGAAGTGGCGATCACCGACCGCCGCTCTGCCGAATTGGACAAGAT
GGGCCTGATGCCGCTGGTGCATCGCAAGAACTCGGACATGGCCGCCTTCATCAGCGCGCAGTCGCTCAACAAGCCCGACG
AATACGACGACCCGGATGCCACCGCCAACGCAGCGTTGGGCGCGCGCTTGCCGTACATGTTCGCGTGCTGCCGCTTTGCG
CATTACCTCAAGTGCATCGTGCGCGACAAGATCGGTTCGTTCTCCGATCGCGAACAGATGCAGAGCTGGCTGACGCGTTG
GGTCACCCAGTACATCGACGGCGACCCGTCCAACTCAAGCGAAGAAACCAAGGCGCGCAAGCCGCTGGCTGCCGCCGAGG
TGGTGGTGGAAGAAGTGGAAGGCGCGCCGGGCTATTACAGCTCCAAGTTCTTCCTCAAGCCGCATTACCAGCTGGAGGGC
CTGACCGTGTCGTTGCGGTTGGTCTCGCGCCTTCCCTCGGCCGCCAAGGCCTGA

Upstream 100 bases:

>100_bases
GCAGAGCAGCTGATTGCCAACGCCATCCGCGACCCGGCGTTGCTGCAGTCGCTGGTGTCGGCCGCCAAGCCTGCCTCCGA
ACCGGAAGGAGCCTGACGCC

Downstream 100 bases:

>100_bases
TCCGACGCATTCGCGTCACGGGCACGACGCGAATGCGCGTCGCGCCACCTCGTGTTGTCACTCTCATTGAAGGAGCAGTT
CCATGGCGTTCGACATGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSATEAALATSSTETTEQGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVSEDVSQTIKAYIAEIDRALTEQ
LNHILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNISKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYG
CLVGDYYFDQSPPDVELLNGMAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG
LAMPRTLSRLPYGAATSPVDEFDFEEDTAGADSSKYTWQNAAYAMAVNINRSFKQYGWCSRIRGIESGGAVEGLPTHTFP
TDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDMAAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFA
HYLKCIVRDKIGSFSDREQMQSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG
LTVSLRLVSRLPSAAKA

Sequences:

>Translated_497_residues
MSATEAALATSSTETTEQGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVSEDVSQTIKAYIAEIDRALTEQ
LNHILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNISKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYG
CLVGDYYFDQSPPDVELLNGMAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG
LAMPRTLSRLPYGAATSPVDEFDFEEDTAGADSSKYTWQNAAYAMAVNINRSFKQYGWCSRIRGIESGGAVEGLPTHTFP
TDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDMAAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFA
HYLKCIVRDKIGSFSDREQMQSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG
LTVSLRLVSRLPSAAKA
>Mature_496_residues
SATEAALATSSTETTEQGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVSEDVSQTIKAYIAEIDRALTEQL
NHILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNISKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYGC
LVGDYYFDQSPPDVELLNGMAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIGL
AMPRTLSRLPYGAATSPVDEFDFEEDTAGADSSKYTWQNAAYAMAVNINRSFKQYGWCSRIRGIESGGAVEGLPTHTFPT
DDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDMAAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFAH
YLKCIVRDKIGSFSDREQMQSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEGL
TVSLRLVSRLPSAAKA

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55240; Mature: 55109

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATEAALATSSTETTEQGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVSE
CCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
DVSQTIKAYIAEIDRALTEQLNHILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
SKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYGCLVGDYYFDQSPPDVELLNG
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCHHHHHH
MAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG
HHHHHHHHCCCHHHHHCHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEE
LAMPRTLSRLPYGAATSPVDEFDFEEDTAGADSSKYTWQNAAYAMAVNINRSFKQYGWCS
EECCHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEECCCEEEEEEECCHHHHHHHHHH
RIRGIESGGAVEGLPTHTFPTDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDM
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCHHHCCCCCCC
AAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFAHYLKCIVRDKIGSFSDREQM
EEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG
HHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECC
LTVSLRLVSRLPSAAKA
CEEHHHHHHHCCHHCCC
>Mature Secondary Structure 
SATEAALATSSTETTEQGDFAALLNREFRPKSERAKEEVESAVRTLAEQVLNRSDVVSE
CCHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
DVSQTIKAYIAEIDRALTEQLNHILHHADLQQLEGAWRGLHYLVNNTETDQQLKIRVLNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
SKKELGKVLKRYKGTAWDQSPIFKKVYEQEYGQLGGEPYGCLVGDYYFDQSPPDVELLNG
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCHHHHHH
MAQVAAAAHAPFIAAAAPKLMGMDNWSELSNPRDLAKIFSTPDYAAWRSLRESEDSKYIG
HHHHHHHHCCCHHHHHCHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEE
LAMPRTLSRLPYGAATSPVDEFDFEEDTAGADSSKYTWQNAAYAMAVNINRSFKQYGWCS
EECCHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEECCCEEEEEEECCHHHHHHHHHH
RIRGIESGGAVEGLPTHTFPTDDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNSDM
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCHHHCCCCCCC
AAFISAQSLNKPDEYDDPDATANAALGARLPYMFACCRFAHYLKCIVRDKIGSFSDREQM
EEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QSWLTRWVTQYIDGDPSNSSEETKARKPLAAAEVVVEEVEGAPGYYSSKFFLKPHYQLEG
HHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEECC
LTVSLRLVSRLPSAAKA
CEEHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA