Click here to switch to the map view.

The map label for this gene is 78049785

Identifier: 78049785

GI number: 78049785

Start: 4858477

End: 4858866

Strand: Reverse

Name: 78049785

Synonym: XCV4229

Alternate gene names: NA

Gene position: 4858866-4858477 (Counterclockwise)

Preceding gene: 78049786

Following gene: 78049784

Centisome position: 93.83

GC content: 65.9

Gene sequence:

>390_bases
ATGAAAATAAGTCTTGCGGTGGTGATGTGCGTGTTGTCGTTACCGGCAGCGGCGCAGTCGGCCTACAAGTGCAGCGATGC
AAAGCTGGGGACCGTTTACCAGTCCACGCCGTGCGCCGACGGCGCCGAGCAGAAGCGTTGGAACAAGCAAGCCGGGCCGG
CTCCGACCGCAACGGTTGCGGCGACGCAGGCAGGCCCGAACACGGCGTCTGCCACGGGCCAGGAGTCAAACCTGGGCTTA
CGCCTGATCAGCTACGAGCGCCAGCCGAGCCCGGAGGCGTGTACGCGCGCCACCCATGTGCGCGACAGCGCCCGCGCCGA
TCCTACGATGCGTGGCGATCCGGATTTCATGCAGGCTCTTGAGCGAGCGGTCGTGCAGGCCTGTCGCTAG

Upstream 100 bases:

>100_bases
CTTTACCCGTCTTCGTCACTGAAGAAGAGAACGCGTGCGCCAAGAGACAACGCTTCGTTCTCCGCTATCGGTAAGCTATG
CCGTTTGGGGGGAGGCGTAA

Downstream 100 bases:

>100_bases
CAAGGGTGTTCAAGTCGCGCATCTGCAATCAAGGCACGGCAAGGAAGATCGATGCAAGGACGTGAAGGGGCTTTTTCCAA
ATGGTGCGAGTTGCTGATCG

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKISLAVVMCVLSLPAAAQSAYKCSDAKLGTVYQSTPCADGAEQKRWNKQAGPAPTATVAATQAGPNTASATGQESNLGL
RLISYERQPSPEACTRATHVRDSARADPTMRGDPDFMQALERAVVQACR

Sequences:

>Translated_129_residues
MKISLAVVMCVLSLPAAAQSAYKCSDAKLGTVYQSTPCADGAEQKRWNKQAGPAPTATVAATQAGPNTASATGQESNLGL
RLISYERQPSPEACTRATHVRDSARADPTMRGDPDFMQALERAVVQACR
>Mature_129_residues
MKISLAVVMCVLSLPAAAQSAYKCSDAKLGTVYQSTPCADGAEQKRWNKQAGPAPTATVAATQAGPNTASATGQESNLGL
RLISYERQPSPEACTRATHVRDSARADPTMRGDPDFMQALERAVVQACR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13611; Mature: 13611

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISLAVVMCVLSLPAAAQSAYKCSDAKLGTVYQSTPCADGAEQKRWNKQAGPAPTATVA
CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCEEE
ATQAGPNTASATGQESNLGLRLISYERQPSPEACTRATHVRDSARADPTMRGDPDFMQAL
ECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHCCCCCCCCCHHHHHHH
ERAVVQACR
HHHHHHHCC
>Mature Secondary Structure
MKISLAVVMCVLSLPAAAQSAYKCSDAKLGTVYQSTPCADGAEQKRWNKQAGPAPTATVA
CCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCEEE
ATQAGPNTASATGQESNLGLRLISYERQPSPEACTRATHVRDSARADPTMRGDPDFMQAL
ECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHCCCCCCCCCHHHHHHH
ERAVVQACR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA