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The map label for this gene is motB [C]

Identifier: 78049766

GI number: 78049766

Start: 4833826

End: 4835082

Strand: Reverse

Name: motB [C]

Synonym: XCV4210

Alternate gene names: 78049766

Gene position: 4835082-4833826 (Counterclockwise)

Preceding gene: 78049767

Following gene: 78049765

Centisome position: 93.37

GC content: 70.25

Gene sequence:

>1257_bases
ATGAGCCGACCTGTTGCCGATCTGGCGCCTGCCTACGCCGCACCGCTGCCGGCCGCAGAGGGCGGCGGCGTGCCCAGCGA
AGATACCGACATCAGCGAACTGCTGGGCCGCAGCGTCAACCCGTTGGTGCAGGCCGCCACGCCGCTGCTGCTGTTGGCGG
TGCAGTTGCGCCACAGCGCGCAATCGCCCGATGTGGCCCGCCTGCGCGAGCAGGTGATGGCGCAGGTGCGCCGCTTCGAA
CAACGTGCACGCGATGGCGGCGCGCCGGTGGAGGCGGTCACCGCCGCGCGCTACGTGTTGTGCGCGCTGCTGGACGAAGC
GGTGCTCAATGCGCCGTGGGGCGAGCGCAGCGGCTGGTCGCAGAAGACCTTGCTGGTGACCTTCCACAGCGAATCGTACG
GCGGCGCCAAGTTCTTCCAGATCCTGGAGCGCTTGTGCGCCGATGTGCCACGGCATCTGGACTTGATCGAGCTGATGTAC
CTGTGCCTGGCGCTGGGGTTTGTCGGCCGCTACCAGATCGAGTCCGGCGGCATGGTGACGCTGGCGGCCATCCAGGACGA
TGTCTATCGCCGCATCCGTGCGGCGCGCGGCCCGGCGCCGGACAGCCTGGCCCCGCGTTGGCGCGGGGTGGAAGACCGCC
GCCGGCTGGGCCGTTATCTGCCGGTGTGGGCGGCTGCGTTGCTGGGGGTGAGCGTGGTGGTGGTGACGTTCGTGTGGTTG
CAGGCGCGTTTGAACAGCCTGTCCGCACCGATCAGTGCGCAGGCTGCCCAATGGGGCATTGCGCCGGCCACGCCACCGGA
CGCTGCGCCCGTGCCGCCGCCGGTGCGGCTCAAGCAGTTGCTCTCCGCGCAGGAACGCGCCGGCCTGCTGCGCGTGGACG
AACAGGCCGACGGGCAGACGCGCGTGCGCCTGAGCAGCGCGGCGATGTTCGCCTCCGGCGGGGTGGAGGTGGAGCCGCAG
CAGCGCGGCTTGATCGCGCAGATTGCAGCGGCCATCGAGCAATTGCCGGGGCGGGTGATCGTGGTCGGGCACACCGACGA
CGTGCCGGTGCGCTCGCTGCGCTTCCAGGACAACTACGCCTTGTCGGCCGCACGTGCGCAGGCGCTTGCGCAGGTGTTGC
AGGCGCAGCTGAGTACGCCGGGGCGGGTGGACGCCATCGGCGCTGGCGATTCGCAACCGATCGCACGGCCAGTGCAATTG
CCGGCCAACCGCGCGCGCAATCGCCGCGTGGAGATCCTGTTCCAGCCTGGGGAATGA

Upstream 100 bases:

>100_bases
CGTTGTGGCGAACGCTGAAGACCTCCGGCGGTATCGCATTCCACTTCGGCAGCGAATTCGCCGGGCTGGACCTGCAACTG
TGGGCGATCCGGAGCTGAGC

Downstream 100 bases:

>100_bases
CGATGAAGACGCTGTTGTCCAAGCTGAGCGCAACGGTAGTGGTTGGCCTGCTGGCGCTGTGCCTGCTGTCGGTGCTGCTG
TGGGTGGGTGGGCCGTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Family Protein; Type VI Secretion System OmpA/MotB Family Protein; OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; DotU Family Type IV/VI Secretion System Protein; Outer Membrane Protein; Type VI Secretion System Core Protein; OmpA/MotB; SciP Protein; Flagellar Motor Rotation Protein MotB; Replication/Virulence Associated Protein; Ompa/Motb Domain Protein; Type IV/VI Secretion System Protein; DotU Family Type IV / VI Secretion System Protein; Outer Membrane Porin Involved In Nitrogen Fixation; Type VI Secretion System Protein ImpK; Aspartyl/Glutamyl-TRNA(Asn/Gln) Amidotransferase Subunit B; OmpA-Family Protein; Type IV / VI Secretion System Protein; Type VI Secretion; Outer Membrane Protein Ompa/Motb Family; OmpA-Type Porin; OmpA-Like Porin; OmpA/MotB Family Outer Membrane Protein; T6ss U; Flagellar Motor Protein; OmpA/MotB-Family Outer Membrane Protein; Type IV / VI Secretion System Family Protein DotU; Type VI Secretion System VasF

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSRPVADLAPAYAAPLPAAEGGGVPSEDTDISELLGRSVNPLVQAATPLLLLAVQLRHSAQSPDVARLREQVMAQVRRFE
QRARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTFHSESYGGAKFFQILERLCADVPRHLDLIELMY
LCLALGFVGRYQIESGGMVTLAAIQDDVYRRIRAARGPAPDSLAPRWRGVEDRRRLGRYLPVWAAALLGVSVVVVTFVWL
QARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPVRLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVEPQ
QRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAIGAGDSQPIARPVQL
PANRARNRRVEILFQPGE

Sequences:

>Translated_418_residues
MSRPVADLAPAYAAPLPAAEGGGVPSEDTDISELLGRSVNPLVQAATPLLLLAVQLRHSAQSPDVARLREQVMAQVRRFE
QRARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTFHSESYGGAKFFQILERLCADVPRHLDLIELMY
LCLALGFVGRYQIESGGMVTLAAIQDDVYRRIRAARGPAPDSLAPRWRGVEDRRRLGRYLPVWAAALLGVSVVVVTFVWL
QARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPVRLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVEPQ
QRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAIGAGDSQPIARPVQL
PANRARNRRVEILFQPGE
>Mature_417_residues
SRPVADLAPAYAAPLPAAEGGGVPSEDTDISELLGRSVNPLVQAATPLLLLAVQLRHSAQSPDVARLREQVMAQVRRFEQ
RARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWSQKTLLVTFHSESYGGAKFFQILERLCADVPRHLDLIELMYL
CLALGFVGRYQIESGGMVTLAAIQDDVYRRIRAARGPAPDSLAPRWRGVEDRRRLGRYLPVWAAALLGVSVVVVTFVWLQ
ARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPVRLKQLLSAQERAGLLRVDEQADGQTRVRLSSAAMFASGGVEVEPQQ
RGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYALSAARAQALAQVLQAQLSTPGRVDAIGAGDSQPIARPVQLP
ANRARNRRVEILFQPGE

Specific function: Required For The Rotation Of The Flagellar Motor. Might Be A Linker That Fastens The Torque-Generating Machinery To The Cell Wall. [C]

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45033; Mature: 44902

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPVADLAPAYAAPLPAAEGGGVPSEDTDISELLGRSVNPLVQAATPLLLLAVQLRHSA
CCCCHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
QSPDVARLREQVMAQVRRFEQRARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QKTLLVTFHSESYGGAKFFQILERLCADVPRHLDLIELMYLCLALGFVGRYQIESGGMVT
CEEEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEECCCCEEE
LAAIQDDVYRRIRAARGPAPDSLAPRWRGVEDRRRLGRYLPVWAAALLGVSVVVVTFVWL
EHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPVRLKQLLSAQERAGLLRVDEQADGQT
HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCC
RVRLSSAAMFASGGVEVEPQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYA
EEEEHHHHHHHCCCCEECHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEECCCHH
LSAARAQALAQVLQAQLSTPGRVDAIGAGDSQPIARPVQLPANRARNRRVEILFQPGE
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCEEEEEECCCC
>Mature Secondary Structure 
SRPVADLAPAYAAPLPAAEGGGVPSEDTDISELLGRSVNPLVQAATPLLLLAVQLRHSA
CCCHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
QSPDVARLREQVMAQVRRFEQRARDGGAPVEAVTAARYVLCALLDEAVLNAPWGERSGWS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QKTLLVTFHSESYGGAKFFQILERLCADVPRHLDLIELMYLCLALGFVGRYQIESGGMVT
CEEEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEECCCCEEE
LAAIQDDVYRRIRAARGPAPDSLAPRWRGVEDRRRLGRYLPVWAAALLGVSVVVVTFVWL
EHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
QARLNSLSAPISAQAAQWGIAPATPPDAAPVPPPVRLKQLLSAQERAGLLRVDEQADGQT
HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCC
RVRLSSAAMFASGGVEVEPQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRSLRFQDNYA
EEEEHHHHHHHCCCCEECHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEECCCHH
LSAARAQALAQVLQAQLSTPGRVDAIGAGDSQPIARPVQLPANRARNRRVEILFQPGE
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA