| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is stp [H]
Identifier: 78049763
GI number: 78049763
Start: 4829014
End: 4829730
Strand: Reverse
Name: stp [H]
Synonym: XCV4207
Alternate gene names: 78049763
Gene position: 4829730-4829014 (Counterclockwise)
Preceding gene: 78049764
Following gene: 78049762
Centisome position: 93.27
GC content: 68.76
Gene sequence:
>717_bases ATGAGCGCGCCCTACCAATCGGCTGGGCACACCGAAACCGGCAAGGTGCGCCGGCTCAACGAAGATGCCTTGCTGCTGCG CGAAGACGCCGGCCTCTGGGTGGTGGCCGATGGCCTGGGTGGCCACAGCGCCGGCGATTACGCCAGCCAGCTGCTGGTGC AGCGGCTGAGCGCATTGGTGCGCCCGGCCGACCTGTGCGATTTCCTGGATGCCATCGACGACACCCTGGCGCAGATCAAT CGCGAGCTGCTGCAGGTTGCGCGCGAGCGCCGCGTGGACATGATCGCCACCACCGTGGTGGTGCTGGTGCACGACCCGGA TTTCATGCTGTGCGGCTGGGTCGGCGACAGCCGCATCTACGCGCAGCATGGCGGCCCGCTGCGCCAGCTCACCCGCGACC ACGTGCACGGCGTGCGCGACGATGTCACCCAGTTCGGCAGCGCACACGCCAGCGCCGCGGCGGCCGGCGTGCTCACGCGC GCGGTGGGTGCGCAAGAGCCGCTGTTCGTCGATTGGGTGCTGACGCCGAGCCTGCCGGGCACGCAGTTTCTGCTGTGCAG CGACGGCATCAACAAGGAAATCCCGGACCCGGAGCTGGATGCCGAATGCCATCGCTTCGGCGATCCACGCGCGCTGCTGG CGCGTCTGTTCGAATTGGCGATGGGGAGGGCGGCACGCGACAACGTCACCGCCGTCGTCGTCCGCCTGCAGGAGTAA
Upstream 100 bases:
>100_bases GGCGGTTGGGCGCGGCCGCGCAATCGATCGACGGGCTGCCCACCGCCCAGATGTATCTGGAGTGGTTGCTGGCCGAGCAG GACATCACCGAGGTGACCCG
Downstream 100 bases:
>100_bases GTGCATGCACGAAGACACCGCCACCGTGACCGAACTGGTCACCGCCATGCGCCGCGGCGCGCTCGACCTCAATGCCGTCC TGGCCGCGCTGGGCAAGCGC
Product: protein phosphatase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLSALVRPADLCDFLDAIDDTLAQIN RELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIYAQHGGPLRQLTRDHVHGVRDDVTQFGSAHASAAAAGVLTR AVGAQEPLFVDWVLTPSLPGTQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE
Sequences:
>Translated_238_residues MSAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLSALVRPADLCDFLDAIDDTLAQIN RELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIYAQHGGPLRQLTRDHVHGVRDDVTQFGSAHASAAAAGVLTR AVGAQEPLFVDWVLTPSLPGTQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE >Mature_237_residues SAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLSALVRPADLCDFLDAIDDTLAQINR ELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIYAQHGGPLRQLTRDHVHGVRDDVTQFGSAHASAAAAGVLTRA VGAQEPLFVDWVLTPSLPGTQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE
Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 25896; Mature: 25764
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLSALV CCCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC RPADLCDFLDAIDDTLAQINRELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEEEECCCCEEE AQHGGPLRQLTRDHVHGVRDDVTQFGSAHASAAAAGVLTRAVGAQEPLFVDWVLTPSLPG ECCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC TQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE CEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure SAPYQSAGHTETGKVRRLNEDALLLREDAGLWVVADGLGGHSAGDYASQLLVQRLSALV CCCCCCCCCCCCCCEEEECCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHC RPADLCDFLDAIDDTLAQINRELLQVARERRVDMIATTVVVLVHDPDFMLCGWVGDSRIY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEEEECCCCEEE AQHGGPLRQLTRDHVHGVRDDVTQFGSAHASAAAAGVLTRAVGAQEPLFVDWVLTPSLPG ECCCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC TQFLLCSDGINKEIPDPELDAECHRFGDPRALLARLFELAMGRAARDNVTAVVVRLQE CEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]