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The map label for this gene is 78049702

Identifier: 78049702

GI number: 78049702

Start: 4747378

End: 4747578

Strand: Reverse

Name: 78049702

Synonym: XCV4146

Alternate gene names: NA

Gene position: 4747578-4747378 (Counterclockwise)

Preceding gene: 78049703

Following gene: 78049701

Centisome position: 91.68

GC content: 59.7

Gene sequence:

>201_bases
ATGAATAGCCGCGTGCGCGAATTGCGCGAGGCCAATGGGTGGTCGCAAGGGGAACTCGGCGAACGGCTGGGTGTGTCGCG
GCAGACGATCAACGCGCTGGAAACCGGCAAGTACGATCCCAGCCTGCCGTTGGCGTTTCGGATCGCACGCCTGTTTGGGG
AATCGATCGAGCACGTTTTTCTTTACGAAGACGGGCAGTAA

Upstream 100 bases:

>100_bases
CGCTGATCGATGTTCCGGCGAGCGCGGCGATGCTGTGGGTGTTTCCGTTGCTGTGCGCCATCTACGGCATCACCAAAAGC
ATCCACGCGCGTCGTTTTGA

Downstream 100 bases:

>100_bases
CGGTCACGTGTGGCCGCATGCAGCGTCAGGGGACAGGCAATGCCAGGAGACGGGATGACGATGGTCAAGCAATCCACGAT
GGTGGCGGCAGTGCTGATGG

Product: putative DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MNSRVRELREANGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIARLFGESIEHVFLYEDGQ

Sequences:

>Translated_66_residues
MNSRVRELREANGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIARLFGESIEHVFLYEDGQ
>Mature_66_residues
MNSRVRELREANGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIARLFGESIEHVFLYEDGQ

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7510; Mature: 7510

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRVRELREANGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIARLFGESIEHVF
CCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEE
LYEDGQ
EEECCC
>Mature Secondary Structure
MNSRVRELREANGWSQGELGERLGVSRQTINALETGKYDPSLPLAFRIARLFGESIEHVF
CCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEE
LYEDGQ
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]