Click here to switch to the map view.

The map label for this gene is 78049467

Identifier: 78049467

GI number: 78049467

Start: 4490383

End: 4490703

Strand: Reverse

Name: 78049467

Synonym: XCV3911

Alternate gene names: NA

Gene position: 4490703-4490383 (Counterclockwise)

Preceding gene: 78049468

Following gene: 78049459

Centisome position: 86.72

GC content: 60.75

Gene sequence:

>321_bases
ATGTTTCTGCAAACCTCACGTGGCGTTCTGACCGCGACTTCTAAGTTGGCCGACGAATGGAGACGAGATTGCTTTATGAG
CAGGCAAAGCCGCTTTGAAACCACCACGTACCGCGAACACGAGATCCGCGTACGCGCCGAGCAGGCTTCCCCTGATGCCA
AGTGGACGCTCTGGGTGGACGTGTACGCGCTCGGCGGCAAGCGCCAGCCGCGTATCGGCTGCAATGGGCTGGCCTATGCG
ACGTACCAGGAGGCCATTGCGCATGGCTTCCGCGCGGGTCGGCAGCTGATTGATGGGCAGTTTGAGACGGCTGATGCGTG
A

Upstream 100 bases:

>100_bases
GGGCAGCGGTTGGTCGCATGCAAGGTATGCGTCAGTGAGGTAGCGCCGCGATGTTTCACGTACCGCCGACGAAGCTACAC
GGCCACGCAACATTAAGCCG

Downstream 100 bases:

>100_bases
GGGGCGGGGATTCGGATTGGTGATTCGGGATGGGTAGGTTTGCTGGGTGCGTCTAGATGACGCGATCGCGTGCATCACGC
TAGGAAATCTGATGCCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MFLQTSRGVLTATSKLADEWRRDCFMSRQSRFETTTYREHEIRVRAEQASPDAKWTLWVDVYALGGKRQPRIGCNGLAYA
TYQEAIAHGFRAGRQLIDGQFETADA

Sequences:

>Translated_106_residues
MFLQTSRGVLTATSKLADEWRRDCFMSRQSRFETTTYREHEIRVRAEQASPDAKWTLWVDVYALGGKRQPRIGCNGLAYA
TYQEAIAHGFRAGRQLIDGQFETADA
>Mature_106_residues
MFLQTSRGVLTATSKLADEWRRDCFMSRQSRFETTTYREHEIRVRAEQASPDAKWTLWVDVYALGGKRQPRIGCNGLAYA
TYQEAIAHGFRAGRQLIDGQFETADA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12134; Mature: 12134

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLQTSRGVLTATSKLADEWRRDCFMSRQSRFETTTYREHEIRVRAEQASPDAKWTLWVD
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEE
VYALGGKRQPRIGCNGLAYATYQEAIAHGFRAGRQLIDGQFETADA
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFLQTSRGVLTATSKLADEWRRDCFMSRQSRFETTTYREHEIRVRAEQASPDAKWTLWVD
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEE
VYALGGKRQPRIGCNGLAYATYQEAIAHGFRAGRQLIDGQFETADA
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA