Click here to switch to the map view.

The map label for this gene is 78049334

Identifier: 78049334

GI number: 78049334

Start: 4362247

End: 4362894

Strand: Reverse

Name: 78049334

Synonym: XCV3778

Alternate gene names: NA

Gene position: 4362894-4362247 (Counterclockwise)

Preceding gene: 78049335

Following gene: 78049333

Centisome position: 84.25

GC content: 69.14

Gene sequence:

>648_bases
GTGAGGGCCGCGCTGCTGACCATTGCCGTGCTCGGCGTGCTGCCGTGGGCAAACGCGGCCGCACGCGAATGCGAGAGCAC
GCTCGGCCGCGGCTGGCCGCCGGCCGTGGGCAACTACGGCACTGCCGTGACCACGTTGCTGGATGGCGGCACCAAGCCGG
CCTTGTCGTTGCTGACGCTGCCCACACGTGGGGTAGAGAGCGCGGTGTCGCTGGTGCCGGGCAAGGAAGGCGCCGACTGG
ACCCTGCGGCATAGCCGCGCCGACGAGCGCGTCTACAGCTGGGTCAGCCAGACCGACCGCGGCAGCGTGCAGTTCCGCAC
CGAGCAGACCCCGGAAACGGTCGAGGTCCCGATCCCGGCGCCGTTGGCCAAGCGCCTGGTCAGCAACTGGACCAACACGC
TGACCCAGCTCGCACCGAACGGACGCACCGCGCCGGTGAGCGAGGGCGAAGTGCTCTCGTTCCAGGTCGATGGCGTGCGC
TACAGCGGCGCGCGCCCCAGCTGCGGTGCCGGCGAGTTGCTGCTGAAACAGGCCGCGCTGCTGATCGAAGCCAGCGAAGG
CAAGGAAAAGAAGCGCGACAAGCGCTGGACCCAAATCGAATCGTCGCTGGATGAACTCCAGCAGACGCTTGCCGGCACGG
CCGGTTGA

Upstream 100 bases:

>100_bases
TGTCGCTGAGCTACGACCACCGCGTCATCGACGGCGCATTGGCAGCCCGTTTCACCACCTACCTCAGCCAGGTGCTGGCC
GACATGCGTCGCGTCCTGCT

Downstream 100 bases:

>100_bases
GCTACAGGAGAAGCAAATGGCGGTCATTGAAATCAAGGTTCCCGACATCGGCGATTACAGCGATGTCCCCGTCATCGAAG
TGCTGGTCGCCGTCGGCGAC

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRAALLTIAVLGVLPWANAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTLPTRGVESAVSLVPGKEGADW
TLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEVPIPAPLAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVR
YSGARPSCGAGELLLKQAALLIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG

Sequences:

>Translated_215_residues
MRAALLTIAVLGVLPWANAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTLPTRGVESAVSLVPGKEGADW
TLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEVPIPAPLAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVR
YSGARPSCGAGELLLKQAALLIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG
>Mature_215_residues
MRAALLTIAVLGVLPWANAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTLPTRGVESAVSLVPGKEGADW
TLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEVPIPAPLAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVR
YSGARPSCGAGELLLKQAALLIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22962; Mature: 22962

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAALLTIAVLGVLPWANAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHEEEC
PTRGVESAVSLVPGKEGADWTLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEVPIPA
CCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCC
PLAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVRYSGARPSCGAGELLLKQAAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHH
LIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG
HEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRAALLTIAVLGVLPWANAAARECESTLGRGWPPAVGNYGTAVTTLLDGGTKPALSLLTL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHEEEC
PTRGVESAVSLVPGKEGADWTLRHSRADERVYSWVSQTDRGSVQFRTEQTPETVEVPIPA
CCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCC
PLAKRLVSNWTNTLTQLAPNGRTAPVSEGEVLSFQVDGVRYSGARPSCGAGELLLKQAAL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHH
LIEASEGKEKKRDKRWTQIESSLDELQQTLAGTAG
HEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA