| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049227
Identifier: 78049227
GI number: 78049227
Start: 4234215
End: 4236098
Strand: Reverse
Name: 78049227
Synonym: XCV3671
Alternate gene names: NA
Gene position: 4236098-4234215 (Counterclockwise)
Preceding gene: 78049228
Following gene: 78049226
Centisome position: 81.8
GC content: 66.72
Gene sequence:
>1884_bases GTGATCCAGAGTTCTTCTACGCAGGTCCTTGTGCTTGCCTGCTGTGTCCTGGCGGCGTCGTGCAGTACAGCGTTGGCCGC CAACCCCAACGCCAACGCCGATGCGGCAGCAGCCAATGCCCAACGCCAACAGGCCATGGCCAATGCGCCGGTTGACAGAA TCATCGTCCGCTACCGCAGCGGGCAGGTCGGTACCGCGCGCGATATCGGCCGCAGTGCCTCGGCGGCAGTCAGTGCGGCC GCCTCGCGCGCATCCGTCCGTCTTGCGCCTGCCGCACGCACCAGTGCCACCGCAGCGCCAACCTATCTGCGCACGCTTGC CGCGGGCGGTGAACTGATCAAATTGCCTGCCCAGCTCAGTCGTGCCGATGCCGACCGGCTTGTGCAGGAATTGAGCGCAG ACCCGGCGGTCGAATCGGCGCAGGTGGATCTGCGCATGTATCCGCTGCAAACCAGCGGCGCATTGCCGAACGACCCGCTG CTGCAAACCAATCAATGGCATCTCATCGACCCGGTGGATGGCATCGACGTCGCCCAAGCCTGGAAAACAACGCAGGGCGA AGGCGTGGTGGTGGCGGTACTGGATACCGGCGTCCTGCCCGACCACCCAGACTTGGCCGGCAATCTGCTCACCGGCTACG ACTTCATCACCGACCCGTTCTTCTCGCGTCGCGCCACGGCCGAGCGTGTGCCCGGCGCACTGGACCTCGGCGATTGGATC GTCGAAGACGGCGATTGCGGGCTGTTCTCGGTGGCCAGCGACAGCAGCTGGCACGGCACGCACGTGGCCGGCACGGTTGC CGAAGCCACCAACAACGGCATTGGCGGGGCAGGCGTCGCCTACCGGGCGAAAGTGCTGCCGGTGCGCGTGCTCGGGCACT GCGGCGGGCGACTCTCCGACATCTCCGATGCCATCGTCTGGGCGTCCGGCGGTCACGTCGATGGCGTACCGGACAACCGC GATCCGGCCGAAGTGATCAACCTAAGCCTGGGCGGTGGCGGTGCATGCGGTTCGGCGATGCAGGCCGCGATCGATGGCGC AGTGGCGCGCGGCACCACCGTGGTGGTGGCGGCGGGTAATTCAACGGCCGATGTATCGACGACGACTCCCGCCAACTGCG CCAATGTGATTGCCGTTGCCGCCACGCGCGCAACCGGCGCGCTTGCCGATTACAGCAATTTCGGCCGTCAGATCGACCTG GCCGGCCCGGGCGGCAGCTCGATGTCCTTCATCACCAACGATGGCCCGATCCGCAGCTTTGTTTGGCAAACCCTCTACAC CGGCAAAACCACACCAACCTCCGGGCAGTTCACCTATGGCGGCACGCGTTACGCCGGCACCTCGATGGCGTCGCCGCATG TGGCCGGCACCGCCGCATTGGTGCAGAGCGCATTGATCGCCGACGGCAAACCGCCGTTGTCGCCGGCCGCAATGGAGAGC CTGCTCAAGCGCACTGCGCGCGCATTCCCGGTGTCGATTCCGGTGGCAACGCCGGCCGGGGCAGGCATCGTGGATGCCGG AGCCGCAGTTGCGCGCGCGTTACGTCGCTGCGATAGGGGCGATGTGGGATGTCAGGTGGATGCGCAGCCTCTGCGTAATG GCGTGGTGCAGAGCGGCATCTCCAATCTGTCGGGCGATGCGGGGGTGTTCACGTTCCAAGCGCAGGCGGGTGCGGTGCTG AGTTTCATCAGCTTCGGCGGCAGCGGCCAGGCGGGGTTGTACGTGGCATTCGGGCGCGAGCCCACCGCCACCGACAACGA CGGCGCGTCTACGCGTCGCGGCACCAGCCAGACGGTGCGCTTCACTGCGCCGCGTGCCGGCACCTACATTCTCAAGCTGG AAGGCAGCGGTTTCGACGCGGTGAGCCTGCTGGCGCGCCAATGA
Upstream 100 bases:
>100_bases GCAGCACGGCCACGCGGTCGCATGCATTCCCGCCGCCCGTCGCCGGGCGGCGCGCTTTCTTCGTCATGCCCTTTCGCACT CACCTCGAAGGAATCCCATC
Downstream 100 bases:
>100_bases TCCGACATGTCGCCGCCGGTTCGGCGAAATCGTCATTTCCTTGGCGGTGAACGCCTGAAACACGGCCACCTCGCGCGCCG ATCGACCGCGCATGCTGGCT
Product: extracellular serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MIQSSSTQVLVLACCVLAASCSTALAANPNANADAAAANAQRQQAMANAPVDRIIVRYRSGQVGTARDIGRSASAAVSAA ASRASVRLAPAARTSATAAPTYLRTLAAGGELIKLPAQLSRADADRLVQELSADPAVESAQVDLRMYPLQTSGALPNDPL LQTNQWHLIDPVDGIDVAQAWKTTQGEGVVVAVLDTGVLPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWI VEDGDCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGRLSDISDAIVWASGGHVDGVPDNR DPAEVINLSLGGGGACGSAMQAAIDGAVARGTTVVVAAGNSTADVSTTTPANCANVIAVAATRATGALADYSNFGRQIDL AGPGGSSMSFITNDGPIRSFVWQTLYTGKTTPTSGQFTYGGTRYAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMES LLKRTARAFPVSIPVATPAGAGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLSGDAGVFTFQAQAGAVL SFISFGGSGQAGLYVAFGREPTATDNDGASTRRGTSQTVRFTAPRAGTYILKLEGSGFDAVSLLARQ
Sequences:
>Translated_627_residues MIQSSSTQVLVLACCVLAASCSTALAANPNANADAAAANAQRQQAMANAPVDRIIVRYRSGQVGTARDIGRSASAAVSAA ASRASVRLAPAARTSATAAPTYLRTLAAGGELIKLPAQLSRADADRLVQELSADPAVESAQVDLRMYPLQTSGALPNDPL LQTNQWHLIDPVDGIDVAQAWKTTQGEGVVVAVLDTGVLPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWI VEDGDCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGRLSDISDAIVWASGGHVDGVPDNR DPAEVINLSLGGGGACGSAMQAAIDGAVARGTTVVVAAGNSTADVSTTTPANCANVIAVAATRATGALADYSNFGRQIDL AGPGGSSMSFITNDGPIRSFVWQTLYTGKTTPTSGQFTYGGTRYAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMES LLKRTARAFPVSIPVATPAGAGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLSGDAGVFTFQAQAGAVL SFISFGGSGQAGLYVAFGREPTATDNDGASTRRGTSQTVRFTAPRAGTYILKLEGSGFDAVSLLARQ >Mature_627_residues MIQSSSTQVLVLACCVLAASCSTALAANPNANADAAAANAQRQQAMANAPVDRIIVRYRSGQVGTARDIGRSASAAVSAA ASRASVRLAPAARTSATAAPTYLRTLAAGGELIKLPAQLSRADADRLVQELSADPAVESAQVDLRMYPLQTSGALPNDPL LQTNQWHLIDPVDGIDVAQAWKTTQGEGVVVAVLDTGVLPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWI VEDGDCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGRLSDISDAIVWASGGHVDGVPDNR DPAEVINLSLGGGGACGSAMQAAIDGAVARGTTVVVAAGNSTADVSTTTPANCANVIAVAATRATGALADYSNFGRQIDL AGPGGSSMSFITNDGPIRSFVWQTLYTGKTTPTSGQFTYGGTRYAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMES LLKRTARAFPVSIPVATPAGAGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLSGDAGVFTFQAQAGAVL SFISFGGSGQAGLYVAFGREPTATDNDGASTRRGTSQTVRFTAPRAGTYILKLEGSGFDAVSLLARQ
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324576, Length=379, Percent_Identity=27.1767810026385, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320775, Length=325, Percent_Identity=28.6153846153846, Blast_Score=94, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6319893, Length=306, Percent_Identity=27.4509803921569, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 63677; Mature: 63677
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSSSTQVLVLACCVLAASCSTALAANPNANADAAAANAQRQQAMANAPVDRIIVRYRS CCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEECC GQVGTARDIGRSASAAVSAAASRASVRLAPAARTSATAAPTYLRTLAAGGELIKLPAQLS CCCCCHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEECCHHHH RADADRLVQELSADPAVESAQVDLRMYPLQTSGALPNDPLLQTNQWHLIDPVDGIDVAQA HCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHH WKTTQGEGVVVAVLDTGVLPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWI HCCCCCCCEEEEEEECCCCCCCCCCCCCHHCCCHHHCCCHHHHCCHHHHCCCCCCCCCEE VEDGDCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGRLSD EECCCCCEEEECCCCCCCCCEEEEEHHHHCCCCCCCCCCEEEEEEEEEHHHHHCCCCHHC ISDAIVWASGGHVDGVPDNRDPAEVINLSLGGGGACGSAMQAAIDGAVARGTTVVVAAGN CCCEEEEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCC STADVSTTTPANCANVIAVAATRATGALADYSNFGRQIDLAGPGGSSMSFITNDGPIRSF CCCCCCCCCCCCHHHEEEEEEHHCCCCHHHHHHCCCEEEECCCCCCCCEEEECCCCHHHH VWQTLYTGKTTPTSGQFTYGGTRYAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMES HHHHHHCCCCCCCCCEEECCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LLKRTARAFPVSIPVATPAGAGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGI HHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHH SNLSGDAGVFTFQAQAGAVLSFISFGGSGQAGLYVAFGREPTATDNDGASTRRGTSQTVR HHCCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE FTAPRAGTYILKLEGSGFDAVSLLARQ EECCCCCEEEEEECCCCCCHHHHHHCC >Mature Secondary Structure MIQSSSTQVLVLACCVLAASCSTALAANPNANADAAAANAQRQQAMANAPVDRIIVRYRS CCCCCCCHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEECC GQVGTARDIGRSASAAVSAAASRASVRLAPAARTSATAAPTYLRTLAAGGELIKLPAQLS CCCCCHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEECCHHHH RADADRLVQELSADPAVESAQVDLRMYPLQTSGALPNDPLLQTNQWHLIDPVDGIDVAQA HCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHH WKTTQGEGVVVAVLDTGVLPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWI HCCCCCCCEEEEEEECCCCCCCCCCCCCHHCCCHHHCCCHHHHCCHHHHCCCCCCCCCEE VEDGDCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGRLSD EECCCCCEEEECCCCCCCCCEEEEEHHHHCCCCCCCCCCEEEEEEEEEHHHHHCCCCHHC ISDAIVWASGGHVDGVPDNRDPAEVINLSLGGGGACGSAMQAAIDGAVARGTTVVVAAGN CCCEEEEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCC STADVSTTTPANCANVIAVAATRATGALADYSNFGRQIDLAGPGGSSMSFITNDGPIRSF CCCCCCCCCCCCHHHEEEEEEHHCCCCHHHHHHCCCEEEECCCCCCCCEEEECCCCHHHH VWQTLYTGKTTPTSGQFTYGGTRYAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMES HHHHHHCCCCCCCCCEEECCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH LLKRTARAFPVSIPVATPAGAGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGI HHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHH SNLSGDAGVFTFQAQAGAVLSFISFGGSGQAGLYVAFGREPTATDNDGASTRRGTSQTVR HHCCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEE FTAPRAGTYILKLEGSGFDAVSLLARQ EECCCCCEEEEEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]