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The map label for this gene is xpsL [H]

Identifier: 78049217

GI number: 78049217

Start: 4217015

End: 4218136

Strand: Reverse

Name: xpsL [H]

Synonym: XCV3661

Alternate gene names: 78049217

Gene position: 4218136-4217015 (Counterclockwise)

Preceding gene: 78049218

Following gene: 78049216

Centisome position: 81.46

GC content: 67.65

Gene sequence:

>1122_bases
ATGACCGCATGGCGGGACACCTTGGGTCGTATCGGCGTACGCGCCATGCCGGGAGCCGGAGGCTTCTGGCGTTGGTGGCA
ACAATCGCTGCTGGCCTGGCTGCCGCAGCGGTGGCAATGGCAGTTGGGCCTGTCGCAGGCACGCCTGCTGTTGCAACAGG
ATGGCGACACGCTGCAGTTGCTGCGCCAGCGCGATCACAGCTGCGACACCGTCGCCAGCCTGCCGTGGCCGGTGCATCCG
CAGGAAGTCAATGGCTTGCTGCCGACAGCGCTTGAAGGCCTGCCGCGGCATTGGCTGTTGCCGGCCGCGCACGCCTTGCG
CCGGCCATTGCGCCTGCCCGCAGCGGCAGCGGCGCGCCTGCAGGACGTGGCGCGTTTCGAGATCGATCGACAAACCCCGT
TCACTGCCGACCAGGTGTATTTCGATGCGCGCGTGCTCGATGTGCGCGAAGACGGCCAGCTCGATGCCGAACTGGTGGTG
GTGCCGCGACGCATGATCGATGGCCCGGCCGGTGTGCCGGACGCATGGAACAGCGCGCTGTCGGGCATCGATGTGACCGA
CGCCAATGGCCTGCCGTTGGGCGTGAACCTGCTGCCGCCGACGCGACGCCTGCGCCGCAGCGACCCGATGCAGCGCTGGA
ACCTGTTGCTGGCCGCCTCTGCGCTGGTGCTGCTGGCCGTTGCCGGCTGGCTGCTGCTCGACAACCGCCGCCAGGCCGCC
GACGATCTGCGCGCCAAGGTGCAGGCCAACGCCGCGCGCGCGCGCAAGGTCGCTGCCGAACGGCAGCAATTGATGGACCT
GGTCGAAGGCGCGCGGTTCTTCCAGCAGCAACGCGCCACCCGCCCGACCTCGGTCGAAATCTGGGACGAACTGAGCCGGC
GCCTGCCCGGTGGCACGTATCTAGAAAAATTTTCGGTCGAAGGCGGGCAACTGCAGTTGATCGGATTGAGCAACGAAGCC
TCTTCGCTGGTGCGTCGTCTGGAAGGCTCGCCGTTGTGGCGTACGCCGTCGTTGACCGGCGTGCTGCAGAGCGATGCCGG
CCGGAATGTCGACCGTTTCACCATCACCGCCGAGCTTGCCGGCCCCGATGCGAAGGAGGCGGCCGATGCCACGCAGCGTT
AA

Upstream 100 bases:

>100_bases
GACGCGAGGCCGTGTTGCGGGCGGTGGTGTCGACCAGCGCGTCCGCATTACCAGGGTCGGCCTATACCGTGTTGCGTTGG
GAAGAGGGAGCAGCAGTGCA

Downstream 100 bases:

>100_bases
GCGCGATCGCTGGATCGCTTTGGGCCTGCTGTTGCTGGTGATCGGCGTGGCCTACCTGGTGCTGGTGCACCCATGGTTCA
CCCAACCGATGATCGCGGTG

Product: general secretion pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDTLQLLRQRDHSCDTVASLPWPVHP
QEVNGLLPTALEGLPRHWLLPAAHALRRPLRLPAAAAARLQDVARFEIDRQTPFTADQVYFDARVLDVREDGQLDAELVV
VPRRMIDGPAGVPDAWNSALSGIDVTDANGLPLGVNLLPPTRRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
DDLRAKVQANAARARKVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTYLEKFSVEGGQLQLIGLSNEA
SSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELAGPDAKEAADATQR

Sequences:

>Translated_373_residues
MTAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDTLQLLRQRDHSCDTVASLPWPVHP
QEVNGLLPTALEGLPRHWLLPAAHALRRPLRLPAAAAARLQDVARFEIDRQTPFTADQVYFDARVLDVREDGQLDAELVV
VPRRMIDGPAGVPDAWNSALSGIDVTDANGLPLGVNLLPPTRRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
DDLRAKVQANAARARKVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTYLEKFSVEGGQLQLIGLSNEA
SSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELAGPDAKEAADATQR
>Mature_372_residues
TAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDTLQLLRQRDHSCDTVASLPWPVHPQ
EVNGLLPTALEGLPRHWLLPAAHALRRPLRLPAAAAARLQDVARFEIDRQTPFTADQVYFDARVLDVREDGQLDAELVVV
PRRMIDGPAGVPDAWNSALSGIDVTDANGLPLGVNLLPPTRRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAAD
DLRAKVQANAARARKVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTYLEKFSVEGGQLQLIGLSNEAS
SLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELAGPDAKEAADATQR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP L family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007813 [H]

Pfam domain/function: PF05137 PilN [H]

EC number: NA

Molecular weight: Translated: 41534; Mature: 41403

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDTLQL
CCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHCCCHHHHH
LRQRDHSCDTVASLPWPVHPQEVNGLLPTALEGLPRHWLLPAAHALRRPLRLPAAAAARL
HHHCCCCCCHHHCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
QDVARFEIDRQTPFTADQVYFDARVLDVREDGQLDAELVVVPRRMIDGPAGVPDAWNSAL
HHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCEEEEECHHHCCCCCCCCHHHHHHH
SGIDVTDANGLPLGVNLLPPTRRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
CCCCEECCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DDLRAKVQANAARARKVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
LEKFSVEGGQLQLIGLSNEASSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELA
HHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEC
GPDAKEAADATQR
CCCHHHHHHCCCC
>Mature Secondary Structure 
TAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDTLQL
CCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHCCCHHHHH
LRQRDHSCDTVASLPWPVHPQEVNGLLPTALEGLPRHWLLPAAHALRRPLRLPAAAAARL
HHHCCCCCCHHHCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
QDVARFEIDRQTPFTADQVYFDARVLDVREDGQLDAELVVVPRRMIDGPAGVPDAWNSAL
HHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCEEEEECHHHCCCCCCCCHHHHHHH
SGIDVTDANGLPLGVNLLPPTRRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
CCCCEECCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DDLRAKVQANAARARKVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
LEKFSVEGGQLQLIGLSNEASSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELA
HHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEC
GPDAKEAADATQR
CCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]