| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78049207
Identifier: 78049207
GI number: 78049207
Start: 4204028
End: 4205062
Strand: Reverse
Name: 78049207
Synonym: XCV3651
Alternate gene names: NA
Gene position: 4205062-4204028 (Counterclockwise)
Preceding gene: 78049208
Following gene: 78049206
Centisome position: 81.2
GC content: 64.73
Gene sequence:
>1035_bases ATGTCTTTACAGAACGACCCGCAAAGGCGGGTACGTCGGTCGTGCGCTACCCCGCTGCAGTCCAGTTCGATTGCCTCGCC GTGTCATCCCAATCCAGCCCAACCGCGTGCGCTGTCGGTCCTGGCATCGGCGCTTGCACTGAGCTGTGTGCTGGCCGCAT TGCCGGGCACCGCATTGGCCGGTGCGTGGACCCAGCCGCAGGGCGACACCCTGGTGATCGTCAAGGCGCTGCATAGCGAT GGCCGCGGGTGGTTCGACGACAGCCACCACCGCACGACCTTCGGCGACGGCCAGCAGTTCGATGGCAATGGCCGCAGCCG TCAGGACCAGCTCAACGTCTACGTCGAGCATGGTCTGACCGAAAAGCTCAGCTTCATCGGCAACTTCTATTTCAACGACG TGGGTTTCAGCAACCACGATGCCGTCAACGGCCGTCAGCAAACCACGACGACCGGTTTTGCCGATCAGGAAATCGGCTTG CGCTATGCATTGCCGAGCGCGCAGAACGATGTCTGGCGCAGTGCCGTGCAGGCCCTGGTGAGCATCCCCGCGTATGGGCG CAGCAAGACCTATCACCCGGACAATCCTTCTGCCAATTCCGACCCTGCGCTTGGCCTGGGCGACTATGGCCTTGAGCTGC GCTACAGCCGCGGCCGCGGCTACACGCTGGGCGGCCGCAACGGCTATGTCGATCTGGGGGGCGCGGTCCGCCTACGCGGA AGCGCGGCGTCCGACGAACTGCGGGTGGACGCGTCCACAGGTCTGAGTCTGACCCCCAGTTGGCTGCTGTTGGGCGAACT CAATGTGATCCAGGGGTTGGGCAACGGGCGTGGCAACTTCGATGTTGCCGGTAGCGGTGGCGGCGTGGGCTTCGTCGCCA CCGGCACCAACTACGATCTCACCAAGTTGCAGTTGTCCACGCTGTACACGGCGCCGGGTGGCAGCCAATGGCAGGTGGGG TATCAGCAGCCGGTGATGGGGCGCAACACCGGTGCCGCGGGCGGGCCATTCGTGGCCGCCTGGTGGCGTTTCTGA
Upstream 100 bases:
>100_bases CGGTGATGGGGCGCCGGCCGCAACTGTGATACGTTTCGCCCCGAAGTGTGATCAACCCTAGCTTCCTGTCCCTTCCGGGT CCCCCATCAGGAATCGTGCA
Downstream 100 bases:
>100_bases GGGGCCGCACATGACGGTCACCTGCGAAACGGACGCGCTGGGACGAGCACCGGACATCGGCCGCGAACGCGGTCTGCTGG GTCGTGCGCTGGTGTCGGCA
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSLQNDPQRRVRRSCATPLQSSSIASPCHPNPAQPRALSVLASALALSCVLAALPGTALAGAWTQPQGDTLVIVKALHSD GRGWFDDSHHRTTFGDGQQFDGNGRSRQDQLNVYVEHGLTEKLSFIGNFYFNDVGFSNHDAVNGRQQTTTTGFADQEIGL RYALPSAQNDVWRSAVQALVSIPAYGRSKTYHPDNPSANSDPALGLGDYGLELRYSRGRGYTLGGRNGYVDLGGAVRLRG SAASDELRVDASTGLSLTPSWLLLGELNVIQGLGNGRGNFDVAGSGGGVGFVATGTNYDLTKLQLSTLYTAPGGSQWQVG YQQPVMGRNTGAAGGPFVAAWWRF
Sequences:
>Translated_344_residues MSLQNDPQRRVRRSCATPLQSSSIASPCHPNPAQPRALSVLASALALSCVLAALPGTALAGAWTQPQGDTLVIVKALHSD GRGWFDDSHHRTTFGDGQQFDGNGRSRQDQLNVYVEHGLTEKLSFIGNFYFNDVGFSNHDAVNGRQQTTTTGFADQEIGL RYALPSAQNDVWRSAVQALVSIPAYGRSKTYHPDNPSANSDPALGLGDYGLELRYSRGRGYTLGGRNGYVDLGGAVRLRG SAASDELRVDASTGLSLTPSWLLLGELNVIQGLGNGRGNFDVAGSGGGVGFVATGTNYDLTKLQLSTLYTAPGGSQWQVG YQQPVMGRNTGAAGGPFVAAWWRF >Mature_343_residues SLQNDPQRRVRRSCATPLQSSSIASPCHPNPAQPRALSVLASALALSCVLAALPGTALAGAWTQPQGDTLVIVKALHSDG RGWFDDSHHRTTFGDGQQFDGNGRSRQDQLNVYVEHGLTEKLSFIGNFYFNDVGFSNHDAVNGRQQTTTTGFADQEIGLR YALPSAQNDVWRSAVQALVSIPAYGRSKTYHPDNPSANSDPALGLGDYGLELRYSRGRGYTLGGRNGYVDLGGAVRLRGS AASDELRVDASTGLSLTPSWLLLGELNVIQGLGNGRGNFDVAGSGGGVGFVATGTNYDLTKLQLSTLYTAPGGSQWQVGY QQPVMGRNTGAAGGPFVAAWWRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36593; Mature: 36462
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQNDPQRRVRRSCATPLQSSSIASPCHPNPAQPRALSVLASALALSCVLAALPGTALA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC GAWTQPQGDTLVIVKALHSDGRGWFDDSHHRTTFGDGQQFDGNGRSRQDQLNVYVEHGLT CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCH EKLSFIGNFYFNDVGFSNHDAVNGRQQTTTTGFADQEIGLRYALPSAQNDVWRSAVQALV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH SIPAYGRSKTYHPDNPSANSDPALGLGDYGLELRYSRGRGYTLGGRNGYVDLGGAVRLRG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCCEEEEEC SAASDELRVDASTGLSLTPSWLLLGELNVIQGLGNGRGNFDVAGSGGGVGFVATGTNYDL CCCCCCEEEECCCCCCCCCCEEEEECHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCE TKLQLSTLYTAPGGSQWQVGYQQPVMGRNTGAAGGPFVAAWWRF EEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure SLQNDPQRRVRRSCATPLQSSSIASPCHPNPAQPRALSVLASALALSCVLAALPGTALA CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC GAWTQPQGDTLVIVKALHSDGRGWFDDSHHRTTFGDGQQFDGNGRSRQDQLNVYVEHGLT CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCH EKLSFIGNFYFNDVGFSNHDAVNGRQQTTTTGFADQEIGLRYALPSAQNDVWRSAVQALV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH SIPAYGRSKTYHPDNPSANSDPALGLGDYGLELRYSRGRGYTLGGRNGYVDLGGAVRLRG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCCEEEEEC SAASDELRVDASTGLSLTPSWLLLGELNVIQGLGNGRGNFDVAGSGGGVGFVATGTNYDL CCCCCCEEEECCCCCCCCCCEEEEECHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCE TKLQLSTLYTAPGGSQWQVGYQQPVMGRNTGAAGGPFVAAWWRF EEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA