| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is maeB [H]
Identifier: 78049154
GI number: 78049154
Start: 4134794
End: 4137103
Strand: Reverse
Name: maeB [H]
Synonym: XCV3598
Alternate gene names: 78049154
Gene position: 4137103-4134794 (Counterclockwise)
Preceding gene: 78049155
Following gene: 78049152
Centisome position: 79.89
GC content: 65.54
Gene sequence:
>2310_bases ATGTCCACCGACGACTTCAAACAGGCCGCCCTCGACTACCACCGCCAGCAGCCGGCCGGCAAGATCAAGGTCACCGCGAC CAAGCCGATGCTGACCCAGCGCGATCTGTCGCTGGCGTATTCGCCGGGCGTGGCGTTCGCCTGCGAGGCCATCGTCGAAG ATGCCACCCAGGCCAGCGAGCTCACCGCGCGCGGCAATCTGGTGGCGGTCATCACCAACGGCACGGCGGTGCTGGGCCTG GGCAACATCGGCCCGCTGGCCTCCAAGCCGGTGATGGAAGGCAAGGGCGTGCTGTTTCAGAAGTTCGCCGGCATCGACGT GTTCGATATCGAAATCAACGAGAACGACCCGGACAAGCTGGTGGACATCATCGCCAGCCTGGAGCCGACCTTCGGCGGCA TCAACCTGGAAGACATCAAGGCGCCGGAATGCTTCATCGTCGAGCGCAAGCTGCGCGAGCGCATGAACATCCCGGTGTTC CACGACGACCAGCACGGCACCGCGATCATCGTTGGCGCCGCCGTGCTCAATGCGCTGGTGGTCACTGGCAAGAAGATCGA AGAGGTCAAGCTGGCCACCACCGGCATGGGCGCGGCCGGCATTTCCTGCGTCAACATGCTGGTATCGCTGGGCCTGAAGC CGGAGAACATCCTGGCGCTGGACCGCGATGGCGTGATCCACACCGGCCGCACCGATCTGGACCCGGACAAGCAGCGCTAC GCCCGCGATACCGACAAGCGCACCCTGGCCGAAATCGTCGAAGGCGCGGACATCTTCCTGGGCCTGTCGGCCGCCGGCAT CCTCAAGCCGGAGATGGTCGCCAGCATGGCGCGCCAGCCGGTGATCTTCGCGCTGGCCAACCCCAATCCGGAAATCACCC CGGAAGTGGCCAAGGCGGTGCGCCCGGATTGCATCATCGGCACCGGTCGGTCGGACTATCCGAACCAGATCAACAACGTG CTGTGCTTCCCGTACCTGTTCCGCGGCGCGCTGGACGTGGGCGCCACCGGCATCAACGAAGAGATGAAGATCGCCTGCGT CAAGGCGATCGCGGCGATGGCGCGGCGCGAGGCCTCCGACCTGGGTGCGGCCTATGGCGGCGAGACCCCGAGCTTCGGTC CCGACTACCTGATTCCGCGTCCACTGGACCCGCGCCTGCTGGTGGAACTGTCGTCTGCGGTTGCGCAGGCGGCCATGGAT TCGGGCGTGGCCACGCGCCCGATCACCGACATGGAGGCCTACCGCGACAAGCTCGGCCAGTTCGTCTACCGCACCAGCCT GATGATGAAGCCGGTCTACGACCGCGCGCGCGCCGACAAGCAGCGCGTGGTGTATGCCGAGGGCGAAGAAGAAGTGGTGC TGCGTGCGGTGCAGAACGTGGTCGACGAAGGCCTGGCCTTCCCGATCCTGATCGGCCGCCCGGACGTGATCGAAGCACGC ATCGAACGCATGGGCCTGCGCCTGACCGCCGGCGTGGATTTCGAGATCACCAACATCCTCGACGACCCCCGCTTCAACGA TTACTGGCAGTACTACCACGCGCTGACCGAGCGTCGTGGCGTGACCGTCACCGCGGCCAAGGAGCTGATGCGCTCGCGCC CGACCCTGATCGCGGCAGTGATGGTGGCGCGCGGCGAAGCCGACGCGATGCTGTCCGGCGTGGTCGGCCGCTTCCACAAG AAGCTGGGCTACGCGCGCAGCGTGATTCCGCTGGAACCGCGGGTGAGCTCCACCTCGGCGATGACTGGTGTCATCAACCA GCTGGGCGTGTTCTTCTTCCTGGATACGCACGTGCAGGAAGACCCGACGGTGGAGCAGGTGGTGGAAGCCACATTGCAGG CCGCGTACCGCCTCAAGCTGTTCGGCATCGAGCCGAATATCGCGCTGCTGTCGCACTCCAACTTCGGCAGCCACGACTCG CGCGATGCGCTGAAGATGCGCCAGGTGCGCGAAGCGCTGCTCAAGCGCAAGCCCGAGCTCAACATCGACGGCGAAATGCA GGGCGACACCGCCTGGGACGAGGCGCTACGCAAGCAGATCATGCCCAACAGCACCTTGAAGGGCCGCGCCAACCTGTTCG TGTTGCCGAACCTGGAAGCGGCCAACATCGCCTACAACCTGGTGCGCGTGTTCACCGATGGCGTGGCGATCGGCCCGATC CTGATGGGCATCTCCAAGCCGGTGCATATCCTCACCACCAGCGCCACCTCGCGCCGGGTGATGAACATGACCGCCATCGC AGCGGTGGATGCGCAGATCCGCAGGCAGCGCGATGCGGAAAAGGCGGCAGCCGACAAGGGCAGCGACTGA
Upstream 100 bases:
>100_bases ACCCGTGATTTCCCTGCCGCGCTGACAGCTGCGCGACAGGCCCTTGTTCAGGCAGGAGGGTAGAATTCAGCCTCCTGCGC CTTCGAGAACCACACCACCG
Downstream 100 bases:
>100_bases CTCGAGATGTTCAGACTTGCCAGGTCCAAGACTTGGCCGAGTGCTGCTTGATTTGAAGCAGCAAGCGCTCGGCCGGCAAG ACAACGGCCGATAAGTGTCT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MSTDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVEDATQASELTARGNLVAVITNGTAVLGL GNIGPLASKPVMEGKGVLFQKFAGIDVFDIEINENDPDKLVDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVF HDDQHGTAIIVGAAVLNALVVTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEVAKAVRPDCIIGTGRSDYPNQINNV LCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASDLGAAYGGETPSFGPDYLIPRPLDPRLLVELSSAVAQAAMD SGVATRPITDMEAYRDKLGQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAVMVARGEADAMLSGVVGRFHK KLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQEDPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDS RDALKMRQVREALLKRKPELNIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRRQRDAEKAAADKGSD
Sequences:
>Translated_769_residues MSTDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVEDATQASELTARGNLVAVITNGTAVLGL GNIGPLASKPVMEGKGVLFQKFAGIDVFDIEINENDPDKLVDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVF HDDQHGTAIIVGAAVLNALVVTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEVAKAVRPDCIIGTGRSDYPNQINNV LCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASDLGAAYGGETPSFGPDYLIPRPLDPRLLVELSSAVAQAAMD SGVATRPITDMEAYRDKLGQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAVMVARGEADAMLSGVVGRFHK KLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQEDPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDS RDALKMRQVREALLKRKPELNIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRRQRDAEKAAADKGSD >Mature_768_residues STDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVEDATQASELTARGNLVAVITNGTAVLGLG NIGPLASKPVMEGKGVLFQKFAGIDVFDIEINENDPDKLVDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVFH DDQHGTAIIVGAAVLNALVVTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRYA RDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEVAKAVRPDCIIGTGRSDYPNQINNVL CFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASDLGAAYGGETPSFGPDYLIPRPLDPRLLVELSSAVAQAAMDS GVATRPITDMEAYRDKLGQFVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEARI ERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAVMVARGEADAMLSGVVGRFHKK LGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQEDPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDSR DALKMRQVREALLKRKPELNIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPIL MGISKPVHILTTSATSRRVMNMTAIAAVDAQIRRQRDAEKAAADKGSD
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=411, Percent_Identity=24.330900243309, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI62420880, Length=411, Percent_Identity=24.330900243309, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI239049447, Length=411, Percent_Identity=24.330900243309, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI4505143, Length=409, Percent_Identity=24.2053789731051, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1788806, Length=755, Percent_Identity=58.8079470198675, Blast_Score=901, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=318, Percent_Identity=29.559748427673, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI1788800, Length=323, Percent_Identity=29.1021671826625, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI87081919, Length=401, Percent_Identity=22.1945137157107, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17537199, Length=343, Percent_Identity=27.6967930029155, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI281362674, Length=490, Percent_Identity=26.734693877551, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI21356279, Length=490, Percent_Identity=26.734693877551, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI281362672, Length=490, Percent_Identity=27.1428571428571, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI78707242, Length=406, Percent_Identity=24.8768472906404, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI78707238, Length=406, Percent_Identity=24.8768472906404, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI78707240, Length=406, Percent_Identity=24.8768472906404, Blast_Score=74, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83678; Mature: 83547
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVEDATQASE CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH LTARGNLVAVITNGTAVLGLGNIGPLASKPVMEGKGVLFQKFAGIDVFDIEINENDPDKL HEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCHHHH VDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVFHDDQHGTAIIVGAAVLNALV HHHHHHCCCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH VTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY HCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCCCHHHH ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEVAKAV HCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHC RPDCIIGTGRSDYPNQINNVLCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASD CCCEEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGAAYGGETPSFGPDYLIPRPLDPRLLVELSSAVAQAAMDSGVATRPITDMEAYRDKLGQ HCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAV HHHCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH MVARGEADAMLSGVVGRFHKKLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQE HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCC DPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDSRDALKMRQVREALLKRKPEL CCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC NIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRRQRDAEKAAADKGSD HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STDDFKQAALDYHRQQPAGKIKVTATKPMLTQRDLSLAYSPGVAFACEAIVEDATQASE CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHH LTARGNLVAVITNGTAVLGLGNIGPLASKPVMEGKGVLFQKFAGIDVFDIEINENDPDKL HEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCHHHH VDIIASLEPTFGGINLEDIKAPECFIVERKLRERMNIPVFHDDQHGTAIIVGAAVLNALV HHHHHHCCCCCCCCCHHHCCCCCCEEHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHHHH VTGKKIEEVKLATTGMGAAGISCVNMLVSLGLKPENILALDRDGVIHTGRTDLDPDKQRY HCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCCCCHHHH ARDTDKRTLAEIVEGADIFLGLSAAGILKPEMVASMARQPVIFALANPNPEITPEVAKAV HCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHC RPDCIIGTGRSDYPNQINNVLCFPYLFRGALDVGATGINEEMKIACVKAIAAMARREASD CCCEEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGAAYGGETPSFGPDYLIPRPLDPRLLVELSSAVAQAAMDSGVATRPITDMEAYRDKLGQ HCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FVYRTSLMMKPVYDRARADKQRVVYAEGEEEVVLRAVQNVVDEGLAFPILIGRPDVIEAR HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH IERMGLRLTAGVDFEITNILDDPRFNDYWQYYHALTERRGVTVTAAKELMRSRPTLIAAV HHHCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH MVARGEADAMLSGVVGRFHKKLGYARSVIPLEPRVSSTSAMTGVINQLGVFFFLDTHVQE HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCC DPTVEQVVEATLQAAYRLKLFGIEPNIALLSHSNFGSHDSRDALKMRQVREALLKRKPEL CCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC NIDGEMQGDTAWDEALRKQIMPNSTLKGRANLFVLPNLEAANIAYNLVRVFTDGVAIGPI CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHH LMGISKPVHILTTSATSRRVMNMTAIAAVDAQIRRQRDAEKAAADKGSD HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]