| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is ywrD [H]
Identifier: 78049134
GI number: 78049134
Start: 4106126
End: 4107835
Strand: Reverse
Name: ywrD [H]
Synonym: XCV3578
Alternate gene names: 78049134
Gene position: 4107835-4106126 (Counterclockwise)
Preceding gene: 78049140
Following gene: 78049133
Centisome position: 79.33
GC content: 66.08
Gene sequence:
>1710_bases ATGCGTCGCGTACCTGTGTTGTTGGTGTCTGCTCTGGCGTTGCTCGCGCCGCCCCTCGGCGCTGCCGACCGCGTCACCGG GCAGCCGTTTGCCACCCGCTCGGAAGTCATTGCGCCGCATGCCATGGCCGCGACCTCGCAACCGCTGGCCACCCAGATCG CGCTGGACGTGATGAAGGATGGCGGCTCGGCGGTGGATGCAGCGATCGCGGCTAATGCGGCGCTGGGCCTGATGGAGCCC ACCGGCAATGGCGTGGGAGGGGATCTATTTGCGATCGTTTGGGACCCCAAGACCCACAAGCTCTACGGCTACAACGGCTC CGGCCGCTCGCCCAAATCGCTGACCCTGGCCGAATTCCAGCGCCGTGGCTTGAAGGACATTCCGCCGACCGGCCCGTTGC CGGTGTCGGTGCCGGGCGCGGTGGACGGCTGGTTCGCGCTGCACGCGCGCTTCGGGCGCAAGCCGATGGCACAGAACCTG GCGCCGGCGATCCGCTACGCGCGCGAAGGCCATCCGGTCGCCGAGACCATCGCCTATTACTGGGACCGTTCGGTGCCGCG CCTGTCGCAATACCCCGGGTTCAAGGAGCAATTCACCATCGACGGCCACGCCCCGCGCAAGGGCGAGCTGTGGAAGAACC CGAACCTGGCCAACACGCTGCAGCAGATCGCCGACGGCGGCCGCGACGCGTTCTACGAGGGCGAGATCGCGCGCACCATC GGTGCCTACTTCAAGGCCAACGGCGGCTACCTCAGCTATGAGGACCTGGCCAGCCATACGGGCGAGTGGGTCGAACCGGT GTCCACCAATTATCGCGGCGTTGATGTGTGGGAACTGCCGCCCAACAGCCAGGGCATCGCCGCGTTGCAGATGCTCAATA TCCTGGAGGGTTACGATTTCTCCAAGATTCCGTTCGGCTCGGCCGAGCACGTGCACTTGTTCACCGAGGCCAAGAAGCTG GCCTTCGCCGACCGCGCGCGCTTCTACGCCGACCCGGCGTTTCAGCCGGCACCGCTGGCCAGGCTGATCTCCAAGGACTA CGCCAACCAGCGGCGCGCGCTGATTTCGATGGACAAGGCGCTCAAGGAAGTACAGCCAGGGACACCCAGGCAACTGGAAG AAGGCGACACCATCTATATGACCGTGGCCGATGCCGACGGCATGATGGTCTCGCTGATCCAGTCCAACTACCGCGGCATG GGCAGCGGCATGGCGCCGCCGGGGCTGGGTTTCATCCTGCAGGACCGCGGCGAGATGTTCGTGCTGAAGAAGGATCATCC CAACGGCTACGCGCCGGGCAAGCGGCCGTTCCAGACCATCATCCCGGCCTTCGTCACCAAGGACGGCAAGCCCTGGCTGA GCTTCGGCGTGATGGGCGGGGCGATGCAGCCGCAGGGGCACGTGCAGATCGTGATGAACCTGGTGGACTTCCACATGAAC CTGCAGGAAGCCGGCGACGCGCCGCGTATCCAGCACGAGGACTCCACCGAACCGACCGGGCAGGCCACCGCGATGCGCGA TGGCGGCGAGGTGAATCTGGAAACCGGCTTCTCCTACGACACCATCCGCGCGCTGATGCGCAAAGGCCACCGGGTGATCT TTGCCGACGGTCCGTACGGCGGGTATCAGGCCATCGCCCGCGATGCGGCCAGCGGCGTGTACTACGGTGCGTCGGAAAGC CGCAAGGACGGCCAGGCGGCCGGATACTGA
Upstream 100 bases:
>100_bases CTGCGCGGCATTGAGCGCGCTGCCAAGTGTCGATCGGACGGCAGGACGCGGCCCGCTGGTATGGTTGGCACCTCATTCTC AGTGTCAGGGGCCCTCGGTG
Downstream 100 bases:
>100_bases GCGCGCGACACGGTTGAGGTTGCCGCTCAACTCCGGCCGCCGCACGCCGCTAATCACGGGATGGAGCAGGAGCCCCTCAT GAATTCGATGCAACAGCCCG
Product: gamma-glutamyltranspeptidase precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MRRVPVLLVSALALLAPPLGAADRVTGQPFATRSEVIAPHAMAATSQPLATQIALDVMKDGGSAVDAAIAANAALGLMEP TGNGVGGDLFAIVWDPKTHKLYGYNGSGRSPKSLTLAEFQRRGLKDIPPTGPLPVSVPGAVDGWFALHARFGRKPMAQNL APAIRYAREGHPVAETIAYYWDRSVPRLSQYPGFKEQFTIDGHAPRKGELWKNPNLANTLQQIADGGRDAFYEGEIARTI GAYFKANGGYLSYEDLASHTGEWVEPVSTNYRGVDVWELPPNSQGIAALQMLNILEGYDFSKIPFGSAEHVHLFTEAKKL AFADRARFYADPAFQPAPLARLISKDYANQRRALISMDKALKEVQPGTPRQLEEGDTIYMTVADADGMMVSLIQSNYRGM GSGMAPPGLGFILQDRGEMFVLKKDHPNGYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGAMQPQGHVQIVMNLVDFHMN LQEAGDAPRIQHEDSTEPTGQATAMRDGGEVNLETGFSYDTIRALMRKGHRVIFADGPYGGYQAIARDAASGVYYGASES RKDGQAAGY
Sequences:
>Translated_569_residues MRRVPVLLVSALALLAPPLGAADRVTGQPFATRSEVIAPHAMAATSQPLATQIALDVMKDGGSAVDAAIAANAALGLMEP TGNGVGGDLFAIVWDPKTHKLYGYNGSGRSPKSLTLAEFQRRGLKDIPPTGPLPVSVPGAVDGWFALHARFGRKPMAQNL APAIRYAREGHPVAETIAYYWDRSVPRLSQYPGFKEQFTIDGHAPRKGELWKNPNLANTLQQIADGGRDAFYEGEIARTI GAYFKANGGYLSYEDLASHTGEWVEPVSTNYRGVDVWELPPNSQGIAALQMLNILEGYDFSKIPFGSAEHVHLFTEAKKL AFADRARFYADPAFQPAPLARLISKDYANQRRALISMDKALKEVQPGTPRQLEEGDTIYMTVADADGMMVSLIQSNYRGM GSGMAPPGLGFILQDRGEMFVLKKDHPNGYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGAMQPQGHVQIVMNLVDFHMN LQEAGDAPRIQHEDSTEPTGQATAMRDGGEVNLETGFSYDTIRALMRKGHRVIFADGPYGGYQAIARDAASGVYYGASES RKDGQAAGY >Mature_569_residues MRRVPVLLVSALALLAPPLGAADRVTGQPFATRSEVIAPHAMAATSQPLATQIALDVMKDGGSAVDAAIAANAALGLMEP TGNGVGGDLFAIVWDPKTHKLYGYNGSGRSPKSLTLAEFQRRGLKDIPPTGPLPVSVPGAVDGWFALHARFGRKPMAQNL APAIRYAREGHPVAETIAYYWDRSVPRLSQYPGFKEQFTIDGHAPRKGELWKNPNLANTLQQIADGGRDAFYEGEIARTI GAYFKANGGYLSYEDLASHTGEWVEPVSTNYRGVDVWELPPNSQGIAALQMLNILEGYDFSKIPFGSAEHVHLFTEAKKL AFADRARFYADPAFQPAPLARLISKDYANQRRALISMDKALKEVQPGTPRQLEEGDTIYMTVADADGMMVSLIQSNYRGM GSGMAPPGLGFILQDRGEMFVLKKDHPNGYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGAMQPQGHVQIVMNLVDFHMN LQEAGDAPRIQHEDSTEPTGQATAMRDGGEVNLETGFSYDTIRALMRKGHRVIFADGPYGGYQAIARDAASGVYYGASES RKDGQAAGY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=543, Percent_Identity=30.2025782688766, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI73915090, Length=543, Percent_Identity=30.2025782688766, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI73915096, Length=543, Percent_Identity=30.2025782688766, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI73915094, Length=543, Percent_Identity=30.2025782688766, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI113429326, Length=554, Percent_Identity=28.3393501805054, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI113429324, Length=549, Percent_Identity=28.4153005464481, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI109148539, Length=502, Percent_Identity=27.0916334661355, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI153266901, Length=561, Percent_Identity=25.1336898395722, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI153266885, Length=560, Percent_Identity=25.1785714285714, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI153266907, Length=560, Percent_Identity=24.1071428571429, Blast_Score=114, Evalue=3e-25, Organism=Escherichia coli, GI1789856, Length=555, Percent_Identity=32.7927927927928, Blast_Score=257, Evalue=2e-69, Organism=Caenorhabditis elegans, GI193208245, Length=499, Percent_Identity=23.0460921843687, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17506189, Length=560, Percent_Identity=23.9285714285714, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI193208247, Length=499, Percent_Identity=23.0460921843687, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI72000294, Length=474, Percent_Identity=24.2616033755274, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI212646519, Length=474, Percent_Identity=24.2616033755274, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17542894, Length=485, Percent_Identity=26.1855670103093, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24642670, Length=550, Percent_Identity=26.7272727272727, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI24642666, Length=550, Percent_Identity=26.7272727272727, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI45551474, Length=550, Percent_Identity=26.7272727272727, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI161077880, Length=550, Percent_Identity=26.7272727272727, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI161077878, Length=550, Percent_Identity=26.7272727272727, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI18859893, Length=462, Percent_Identity=27.0562770562771, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI161077496, Length=508, Percent_Identity=25.1968503937008, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI18859741, Length=482, Percent_Identity=25.7261410788382, Blast_Score=111, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 61646; Mature: 61646
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVPVLLVSALALLAPPLGAADRVTGQPFATRSEVIAPHAMAATSQPLATQIALDVMKD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHC GGSAVDAAIAANAALGLMEPTGNGVGGDLFAIVWDPKTHKLYGYNGSGRSPKSLTLAEFQ CCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHH RRGLKDIPPTGPLPVSVPGAVDGWFALHARFGRKPMAQNLAPAIRYAREGHPVAETIAYY HCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH WDRSVPRLSQYPGFKEQFTIDGHAPRKGELWKNPNLANTLQQIADGGRDAFYEGEIARTI HCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCHHHHHH GAYFKANGGYLSYEDLASHTGEWVEPVSTNYRGVDVWELPPNSQGIAALQMLNILEGYDF HHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCC SKIPFGSAEHVHLFTEAKKLAFADRARFYADPAFQPAPLARLISKDYANQRRALISMDKA CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKEVQPGTPRQLEEGDTIYMTVADADGMMVSLIQSNYRGMGSGMAPPGLGFILQDRGEMF HHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEE VLKKDHPNGYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGAMQPQGHVQIVMNLVDFHMN EEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC LQEAGDAPRIQHEDSTEPTGQATAMRDGGEVNLETGFSYDTIRALMRKGHRVIFADGPYG HHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCC GYQAIARDAASGVYYGASESRKDGQAAGY HHHHHHHHHHCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MRRVPVLLVSALALLAPPLGAADRVTGQPFATRSEVIAPHAMAATSQPLATQIALDVMKD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHC GGSAVDAAIAANAALGLMEPTGNGVGGDLFAIVWDPKTHKLYGYNGSGRSPKSLTLAEFQ CCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHH RRGLKDIPPTGPLPVSVPGAVDGWFALHARFGRKPMAQNLAPAIRYAREGHPVAETIAYY HCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH WDRSVPRLSQYPGFKEQFTIDGHAPRKGELWKNPNLANTLQQIADGGRDAFYEGEIARTI HCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCHHHHHH GAYFKANGGYLSYEDLASHTGEWVEPVSTNYRGVDVWELPPNSQGIAALQMLNILEGYDF HHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCC SKIPFGSAEHVHLFTEAKKLAFADRARFYADPAFQPAPLARLISKDYANQRRALISMDKA CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKEVQPGTPRQLEEGDTIYMTVADADGMMVSLIQSNYRGMGSGMAPPGLGFILQDRGEMF HHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEE VLKKDHPNGYAPGKRPFQTIIPAFVTKDGKPWLSFGVMGGAMQPQGHVQIVMNLVDFHMN EEEECCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC LQEAGDAPRIQHEDSTEPTGQATAMRDGGEVNLETGFSYDTIRALMRKGHRVIFADGPYG HHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCC GYQAIARDAASGVYYGASESRKDGQAAGY HHHHHHHHHHCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]