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The map label for this gene is yneE [H]

Identifier: 78049105

GI number: 78049105

Start: 4066698

End: 4067582

Strand: Reverse

Name: yneE [H]

Synonym: XCV3549

Alternate gene names: 78049105

Gene position: 4067582-4066698 (Counterclockwise)

Preceding gene: 78049106

Following gene: 78049103

Centisome position: 78.55

GC content: 61.58

Gene sequence:

>885_bases
TTGATTGTCGATGTAAAGCCGCGTGTGGCAGATGTGATCAGCCAGGTCTGGCGGACCCTGGCGGTGTTGTTCGTATGGGA
TGTGTTGATCACCATCATTTACTACGTGCTGCCGCTCCGTGCGCCGGCGTTGCCGCTGACCATCTTTGGTTCTGCGCTGG
CGTTGTTCCTGGGCTTTCGCGCCAATTCCACCTATCAACGCTGGTGGGAGGGGCGGGTGCTGTGGGGCCAGATGATCAAT
GCCTCGCGTAATCTGGTGCGGGTGAGCGTCAGTATCCTGTCCGCACCGGAAGCCGGCGATCTTGGGCGCACCATTGCGCT
GCGCCAGATTGCCTACGTCAACGCGCTGCGCTGCCAACTACGCCGGTTGCCGGTGGCGATGGCATTGTCCCCGCATGTGG
ATGCCGACGAAGCTGCGGCGGTGGTGGTGCGCACCAACGTGGCAAACGGGTTGCTCGATACCACCGGGCGCAGCGTCGAG
CAGGCGCGTCGTGAGGGCTGGATCGACAGCATCCAGCAGGCCAGCGTCGAACGCATTCTGGTGGACATCGCCAACGCGCA
AGGCGGCATGGAGCGCCTGAAAAATACGCTGCTGCCGTATCAATATCGCTTTTATCCGAACCTGTTTACGCGGCTGTTCT
GCGTGCTGCTGCCAATCGGCTTGGTGGAAACGCTGCAGTACGCCACGCCGGTGGGATCGACAGTGGCCGGCCTGATGTTT
CTGGCGGTGCTGAAGATCGGCGATGAACTGGTCGACCCGTTCGCCAACACCATCCACGACCTGCCGCTGGATACCATGTG
CCGCACGGTGGAGATCGATGCGCTTCAGGCAATTGGTGAGCAAGCGCCGGAGCCGATGCAGCCAGTGGATGGCGTGTTGT
GGTGA

Upstream 100 bases:

>100_bases
TGGCAACGGCACACTGCGCACGCTTGAGTGCGCTACCGACCGCATCCATGCACTGGATGCGCGCAATGGCGTCACTCGTT
TCTTTTGATGGAGTGTGCCT

Downstream 100 bases:

>100_bases
GGTCTCGCGCGCCAGGCCAATGCGGCCTTTGCATCGCCGAACTGCACTGATTCGCATCTTGTCGTTCGCCTTGAGAGGCG
ATTGAACGGTGCAAGCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MIVDVKPRVADVISQVWRTLAVLFVWDVLITIIYYVLPLRAPALPLTIFGSALALFLGFRANSTYQRWWEGRVLWGQMIN
ASRNLVRVSVSILSAPEAGDLGRTIALRQIAYVNALRCQLRRLPVAMALSPHVDADEAAAVVVRTNVANGLLDTTGRSVE
QARREGWIDSIQQASVERILVDIANAQGGMERLKNTLLPYQYRFYPNLFTRLFCVLLPIGLVETLQYATPVGSTVAGLMF
LAVLKIGDELVDPFANTIHDLPLDTMCRTVEIDALQAIGEQAPEPMQPVDGVLW

Sequences:

>Translated_294_residues
MIVDVKPRVADVISQVWRTLAVLFVWDVLITIIYYVLPLRAPALPLTIFGSALALFLGFRANSTYQRWWEGRVLWGQMIN
ASRNLVRVSVSILSAPEAGDLGRTIALRQIAYVNALRCQLRRLPVAMALSPHVDADEAAAVVVRTNVANGLLDTTGRSVE
QARREGWIDSIQQASVERILVDIANAQGGMERLKNTLLPYQYRFYPNLFTRLFCVLLPIGLVETLQYATPVGSTVAGLMF
LAVLKIGDELVDPFANTIHDLPLDTMCRTVEIDALQAIGEQAPEPMQPVDGVLW
>Mature_294_residues
MIVDVKPRVADVISQVWRTLAVLFVWDVLITIIYYVLPLRAPALPLTIFGSALALFLGFRANSTYQRWWEGRVLWGQMIN
ASRNLVRVSVSILSAPEAGDLGRTIALRQIAYVNALRCQLRRLPVAMALSPHVDADEAAAVVVRTNVANGLLDTTGRSVE
QARREGWIDSIQQASVERILVDIANAQGGMERLKNTLLPYQYRFYPNLFTRLFCVLLPIGLVETLQYATPVGSTVAGLMF
LAVLKIGDELVDPFANTIHDLPLDTMCRTVEIDALQAIGEQAPEPMQPVDGVLW

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=283, Percent_Identity=33.5689045936396, Blast_Score=154, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 32611; Mature: 32611

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDVKPRVADVISQVWRTLAVLFVWDVLITIIYYVLPLRAPALPLTIFGSALALFLGFR
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
ANSTYQRWWEGRVLWGQMINASRNLVRVSVSILSAPEAGDLGRTIALRQIAYVNALRCQL
CCCHHHHHHCCHHHHHHHHHCCCHHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RRLPVAMALSPHVDADEAAAVVVRTNVANGLLDTTGRSVEQARREGWIDSIQQASVERIL
HHCCHHHEECCCCCCHHHHEEEEEECHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VDIANAQGGMERLKNTLLPYQYRFYPNLFTRLFCVLLPIGLVETLQYATPVGSTVAGLMF
HHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LAVLKIGDELVDPFANTIHDLPLDTMCRTVEIDALQAIGEQAPEPMQPVDGVLW
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVDVKPRVADVISQVWRTLAVLFVWDVLITIIYYVLPLRAPALPLTIFGSALALFLGFR
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
ANSTYQRWWEGRVLWGQMINASRNLVRVSVSILSAPEAGDLGRTIALRQIAYVNALRCQL
CCCHHHHHHCCHHHHHHHHHCCCHHHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RRLPVAMALSPHVDADEAAAVVVRTNVANGLLDTTGRSVEQARREGWIDSIQQASVERIL
HHCCHHHEECCCCCCHHHHEEEEEECHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VDIANAQGGMERLKNTLLPYQYRFYPNLFTRLFCVLLPIGLVETLQYATPVGSTVAGLMF
HHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LAVLKIGDELVDPFANTIHDLPLDTMCRTVEIDALQAIGEQAPEPMQPVDGVLW
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]